RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 R4GMQ9 66 aa1.39□□□□□ -2.19
XRN1-211ENST00000477237 GOLGA4Q13439 2230 aaKnown RBP1.39□□□□□ -2.19
XRN1-211ENST00000477237 PRRC2BQ5JSZ5 2229 aaKnown RBP1.39□□□□□ -2.19
XRN1-211ENST00000477237 DOCK10Q96BY6 2186 aa1.38□□□□□ -2.19
XRN1-211ENST00000477237 IGLV4-60A0A075B6I1 120 aa1.38□□□□□ -2.19
XRN1-211ENST00000477237 H0YGX0 51 aa1.38□□□□□ -2.19
XRN1-211ENST00000477237 NCR3O14931 201 aa1.38□□□□□ -2.19
XRN1-211ENST00000477237 IGKV4-1P06312 121 aa1.38□□□□□ -2.19
XRN1-211ENST00000477237 MGPP08493 103 aa1.38□□□□□ -2.19
XRN1-211ENST00000477237 FXYD4P59646 89 aa1.38□□□□□ -2.19
XRN1-211ENST00000477237 COA5Q86WW8 74 aa1.38□□□□□ -2.19
XRN1-211ENST00000477237 LINC00472Q9H8W2 130 aa1.38□□□□□ -2.19
XRN1-211ENST00000477237 FREM1Q5H8C1 2179 aa1.38□□□□□ -2.19
XRN1-211ENST00000477237 COL4A2P08572 1712 aa1.37□□□□□ -2.19
XRN1-211ENST00000477237 FBN3Q75N90 2809 aa1.37□□□□□ -2.19
XRN1-211ENST00000477237 OTOGLQ3ZCN5 2332 aa1.37□□□□□ -2.19
XRN1-211ENST00000477237 TRGV4A0A0C4DH28 118 aa1.37□□□□□ -2.19
XRN1-211ENST00000477237 IGKV2-29A2NJV5 120 aaPredicted RBP1.37□□□□□ -2.19
XRN1-211ENST00000477237 LOC730098B7Z3J9 87 aa1.37□□□□□ -2.19
XRN1-211ENST00000477237 IGLV3-1P01715 115 aa1.37□□□□□ -2.19
XRN1-211ENST00000477237 DEFB132Q7Z7B7 95 aa1.37□□□□□ -2.19
XRN1-211ENST00000477237 ST20-AS1Q8NBB2 130 aa1.37□□□□□ -2.19
XRN1-211ENST00000477237 PATE1Q8WXA2 126 aa1.37□□□□□ -2.19
XRN1-211ENST00000477237 GAFA1Q96PS6 74 aa1.37□□□□□ -2.19
XRN1-211ENST00000477237 SMIM2Q9BVW6 85 aa1.37□□□□□ -2.19
XRN1-211ENST00000477237 NBDYA0A0U1RRE5 68 aa1.36□□□□□ -2.19
XRN1-211ENST00000477237 ETDCA0A1B0GVM5 59 aa1.36□□□□□ -2.19
XRN1-211ENST00000477237 KRTAP12-4P60329 112 aa1.36□□□□□ -2.19
XRN1-211ENST00000477237 PRO2289Q9P1D8 64 aa1.36□□□□□ -2.19
XRN1-211ENST00000477237 TRGV2A0A075B6R0 118 aa1.35□□□□□ -2.19
XRN1-211ENST00000477237 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.35□□□□□ -2.19
XRN1-211ENST00000477237 TRBV6-4A0A1B0GX49 114 aa1.35□□□□□ -2.19
XRN1-211ENST00000477237 NDUFA1O15239 70 aa1.35□□□□□ -2.19
XRN1-211ENST00000477237 RNASE3P12724 160 aaKnown RBP1.35□□□□□ -2.19
XRN1-211ENST00000477237 HAMPP81172 84 aa1.35□□□□□ -2.19
XRN1-211ENST00000477237 DEFB116Q30KQ4 102 aa1.35□□□□□ -2.19
XRN1-211ENST00000477237 DEFB112Q30KQ8 113 aa1.35□□□□□ -2.19
XRN1-211ENST00000477237 PRR14LQ5THK1 2151 aa1.35□□□□□ -2.19
XRN1-211ENST00000477237 CUL9Q8IWT3 2517 aa1.34□□□□□ -2.19
XRN1-211ENST00000477237 CACNA1DQ01668 2161 aa1.34□□□□□ -2.19
XRN1-211ENST00000477237 Q6ZTI0 123 aa1.34□□□□□ -2.19
XRN1-211ENST00000477237 LINC00308Q8TCZ7 52 aa1.34□□□□□ -2.19
XRN1-211ENST00000477237 ABCA4P78363 2273 aa1.34□□□□□ -2.2
XRN1-211ENST00000477237 ALPK2Q86TB3 2170 aa1.34□□□□□ -2.2
XRN1-211ENST00000477237 SHANK1Q9Y566 2161 aa1.34□□□□□ -2.2
XRN1-211ENST00000477237 SDK1Q7Z5N4 2213 aa1.34□□□□□ -2.2
XRN1-211ENST00000477237 IGKV2-40A0A087WW87 121 aaPredicted RBP1.33□□□□□ -2.2
XRN1-211ENST00000477237 A0A1W2PNN7 141 aa1.33□□□□□ -2.2
XRN1-211ENST00000477237 H3BSH0 61 aa1.33□□□□□ -2.2
XRN1-211ENST00000477237 IGKV2D-40P01614 121 aaPredicted RBP1.33□□□□□ -2.2
XRN1-211ENST00000477237 COX7BP24311 80 aa1.33□□□□□ -2.2
XRN1-211ENST00000477237 CRIP1P50238 77 aa1.33□□□□□ -2.2
XRN1-211ENST00000477237 COX17Q14061 63 aa1.33□□□□□ -2.2
XRN1-211ENST00000477237 SPINT4Q6UDR6 99 aa1.33□□□□□ -2.2
XRN1-211ENST00000477237 Q96NJ1 140 aa1.33□□□□□ -2.2
XRN1-211ENST00000477237 TNCP24821 2201 aa1.33□□□□□ -2.2
XRN1-211ENST00000477237 TRGV1A0A0A0MS02 117 aa1.32□□□□□ -2.2
XRN1-211ENST00000477237 M0R2N4 97 aa1.32□□□□□ -2.2
XRN1-211ENST00000477237 RPL37AP61513 92 aaKnown RBP1.32□□□□□ -2.2
XRN1-211ENST00000477237 TPRXLQ17RH7 258 aa1.32□□□□□ -2.2
XRN1-211ENST00000477237 KRTAP13-1Q8IUC0 172 aa1.32□□□□□ -2.2
XRN1-211ENST00000477237 C5orf56Q8N8D9 126 aa1.32□□□□□ -2.2
XRN1-211ENST00000477237 SMIM11BQ8TCY0 68 aa1.32□□□□□ -2.2
XRN1-211ENST00000477237 C4orf3Q8WVX3 66 aa1.32□□□□□ -2.2
XRN1-211ENST00000477237 PSORS1C2Q9UIG4 136 aa1.32□□□□□ -2.2
XRN1-211ENST00000477237 CACNA1CQ13936 2221 aa1.32□□□□□ -2.2
XRN1-211ENST00000477237 A0A0G2JQZ4 141 aa1.31□□□□□ -2.2
XRN1-211ENST00000477237 A0A1B0GU69 56 aa1.31□□□□□ -2.2
XRN1-211ENST00000477237 SPACA4Q8TDM5 124 aa1.31□□□□□ -2.2
XRN1-211ENST00000477237 ZFHX2Q9C0A1 2572 aaPredicted RBP1.31□□□□□ -2.2
XRN1-211ENST00000477237 SPAG17Q6Q759 2223 aa1.31□□□□□ -2.2
XRN1-211ENST00000477237 DEFB131BA0A096LNP1 70 aa1.3□□□□□ -2.2
XRN1-211ENST00000477237 RPS27P42677 84 aaKnown RBP1.3□□□□□ -2.2
XRN1-211ENST00000477237 LINC00158P58513 81 aa1.3□□□□□ -2.2
XRN1-211ENST00000477237 Q6ZQY7 126 aa1.3□□□□□ -2.2
XRN1-211ENST00000477237 LINC00304Q8N9R0 145 aa1.3□□□□□ -2.2
XRN1-211ENST00000477237 R4GN34 69 aa1.3□□□□□ -2.2
XRN1-211ENST00000477237 UNC13CQ8NB66 2214 aa1.3□□□□□ -2.2
XRN1-211ENST00000477237 CCL22O00626 93 aa1.29□□□□□ -2.2
XRN1-211ENST00000477237 IGLV6-57P01721 117 aa1.29□□□□□ -2.2
XRN1-211ENST00000477237 PRB1P04280 392 aa1.29□□□□□ -2.2
XRN1-211ENST00000477237 HRES1P13985 223 aa1.29□□□□□ -2.2
XRN1-211ENST00000477237 POLR2KP53803 58 aaKnown RBP1.29□□□□□ -2.2
XRN1-211ENST00000477237 CCL19Q99731 98 aa1.29□□□□□ -2.2
XRN1-211ENST00000477237 CCL26Q9Y258 94 aa1.29□□□□□ -2.2
XRN1-211ENST00000477237 CADP27708 2225 aa1.29□□□□□ -2.2
XRN1-211ENST00000477237 KNTC1P50748 2209 aa1.29□□□□□ -2.2
XRN1-211ENST00000477237 ANKRD17O75179 2603 aaKnown RBP1.29□□□□□ -2.2
XRN1-211ENST00000477237 SEC16AO15027 2179 aa1.28□□□□□ -2.2
XRN1-211ENST00000477237 A0A096LNT2 108 aa1.28□□□□□ -2.2
XRN1-211ENST00000477237 PIGYQ3MUY2 71 aa1.28□□□□□ -2.2
XRN1-211ENST00000477237 C10orf55Q5SWW7 151 aa1.28□□□□□ -2.2
XRN1-211ENST00000477237 Q8IZM0 81 aa1.28□□□□□ -2.2
XRN1-211ENST00000477237 RP1P56715 2156 aa1.28□□□□□ -2.2
XRN1-211ENST00000477237 F5P12259 2224 aa1.27□□□□□ -2.21
XRN1-211ENST00000477237 MED13LQ71F56 2210 aa1.27□□□□□ -2.21
XRN1-211ENST00000477237 MRPL33O75394 65 aaKnown RBP1.27□□□□□ -2.21
XRN1-211ENST00000477237 LY6G6CO95867 125 aa1.27□□□□□ -2.21
XRN1-211ENST00000477237 RPL39P62891 51 aaKnown RBP1.27□□□□□ -2.21
XRN1-211ENST00000477237 SPINK9Q5DT21 86 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms