RNA–Protein interactions for RNA: ENST00000473295.2

SCN1A-205, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 544 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-205ENST00000473295 SMIM4Q8WVI0 70 aa-0.74□□□□□ -2.53
SCN1A-205ENST00000473295 PPP1R14BQ96C90 147 aa-0.74□□□□□ -2.53
SCN1A-205ENST00000473295 CCDC32Q9BV29 185 aa-0.74□□□□□ -2.53
SCN1A-205ENST00000473295 DDA1Q9BW61 102 aa-0.74□□□□□ -2.53
SCN1A-205ENST00000473295 TMEM191AQ9H0A3 160 aa-0.74□□□□□ -2.53
SCN1A-205ENST00000473295 ARL2BPQ9Y2Y0 163 aa-0.74□□□□□ -2.53
SCN1A-205ENST00000473295 SERP1Q9Y6X1 66 aa-0.74□□□□□ -2.53
SCN1A-205ENST00000473295 PDCD11Q14690 1871 aaKnown RBP-0.74□□□□□ -2.53
SCN1A-205ENST00000473295 ANKRD30AQ9BXX3 1397 aa-0.74□□□□□ -2.53
SCN1A-205ENST00000473295 MYOM3Q5VTT5 1437 aa-0.74□□□□□ -2.53
SCN1A-205ENST00000473295 EDC4Q6P2E9 1401 aaKnown RBP-0.74□□□□□ -2.53
SCN1A-205ENST00000473295 SCAPERQ9BY12 1400 aa-0.74□□□□□ -2.53
SCN1A-205ENST00000473295 ANKRD50Q9ULJ7 1429 aa-0.74□□□□□ -2.53
SCN1A-205ENST00000473295 CFTRP13569 1480 aa-0.74□□□□□ -2.53
SCN1A-205ENST00000473295 GRIN2AQ12879 1464 aa-0.74□□□□□ -2.53
SCN1A-205ENST00000473295 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.74□□□□□ -2.53
SCN1A-205ENST00000473295 LRBAP50851 2863 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 TMEM131LA2VDJ0 1609 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 TOP2BQ02880 1626 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 CUL7Q14999 1698 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 SPHKAPQ2M3C7 1700 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 TIAM2Q8IVF5 1701 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 MYO9AB2RTY4 2548 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 SPEF2Q9C093 1822 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 VPS13CQ709C8 3753 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 IGLV5-48A0A075B6I7 105 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 A0A0G2JND7 137 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 PNMA8CA0A1B0GUJ8 204 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 H0Y9P7 68 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 SYS1-DBNDD2H3BUS1 97 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 I3L3M4 83 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 SSSCA1O60232 199 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 APOA2P02652 100 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 RBP4P02753 201 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 HMGA1P17096 107 aaKnown RBP-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 CEBPGP53567 150 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 LINC00158P58513 81 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 MRPS25P82663 173 aaKnown RBP-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 CATR1Q13166 79 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 MEIG1Q5JSS6 88 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 SAMD13Q5VXD3 122 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 RPL7L1Q6DKI1 246 aaKnown RBP-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 DEFB106AQ8N104 65 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 TMEM35BQ8NCS4 154 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 SPTSSAQ969W0 71 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 SCP2D1Q9UJQ7 156 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 OVOS2A0A0J9YW53 1432 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 DAPK1P53355 1430 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 OVOS2Q6IE36 1432 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 A2ML1A8K2U0 1454 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 PZPP20742 1482 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 MYOM2P54296 1465 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 TEX14Q8IWB6 1497 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 FYCO1Q9BQS8 1478 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 MLH3Q9UHC1 1453 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 NEXMIFQ5QGS0 1516 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 POLR1AO95602 1720 aaPredicted RBP-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 QSER1Q2KHR3 1735 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 MON2Q7Z3U7 1717 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 TOGARAM1Q9Y4F4 1720 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 ATMQ13315 3056 aa-0.75□□□□□ -2.53
SCN1A-205ENST00000473295 MYH7P12883 1935 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 TRBV7-7A0A0K0K1E9 115 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 LCE6AA0A183 80 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 A0A1B0GV90 55 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 H0YGG7 62 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 H0YJX3 145 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 SMIM24O75264 130 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 IFNGP01579 166 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 APOC1P02654 83 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 MGPP08493 103 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 ARMS2P0C7Q2 107 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 COX8AP10176 69 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 PIPP12273 146 aaPredicted RBP-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 FGF7P21781 194 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 COX7BP24311 80 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 S100A3P33764 101 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 COX17Q14061 63 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 SMIM21Q3B7S5 101 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 TRIQKQ629K1 86 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 TSTD1Q8NFU3 115 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 ANP32BQ92688 251 aaKnown RBP-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 USMG5Q96IX5 58 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 SNRNP25Q9BV90 132 aaKnown RBP-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 LINC00470Q9BZP3 86 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 RERGLQ9H628 205 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 MRPL40Q9NQ50 206 aaKnown RBP-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 CALML5Q9NZT1 146 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 LRRC7Q96NW7 1537 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 LRRC37AA6NMS7 1700 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 WDFY3Q8IZQ1 3526 aa-0.76□□□□□ -2.53
SCN1A-205ENST00000473295 CFAP46Q8IYW2 2715 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 ANKRD36CQ5JPF3 1778 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 TJP1Q07157 1748 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 CROCC2H7BZ55 1655 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 C5P01031 1676 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 NESP48681 1621 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 DIP2BQ9P265 1576 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 MED14O60244 1454 aa-0.77□□□□□ -2.53
SCN1A-205ENST00000473295 ANKRD36BQ8N2N9 1353 aa-0.77□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms