RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 CIRBP-AS1Q8TBR5 109 aa3.2□□□□□ -1.9
RBM39-227ENST00000470563 PTPRQQ9UMZ3 2332 aa3.2□□□□□ -1.9
RBM39-227ENST00000470563 IGKV3D-7A0A0C4DH55 119 aa3.19□□□□□ -1.9
RBM39-227ENST00000470563 SS18Q15532 418 aa3.19□□□□□ -1.9
RBM39-227ENST00000470563 DEFB114Q30KQ6 69 aa3.19□□□□□ -1.9
RBM39-227ENST00000470563 DEFB112Q30KQ8 113 aa3.19□□□□□ -1.9
RBM39-227ENST00000470563 C6orf99Q4VX62 202 aa3.19□□□□□ -1.9
RBM39-227ENST00000470563 C3orf56Q8N813 242 aa3.19□□□□□ -1.9
RBM39-227ENST00000470563 Q8N814 137 aa3.19□□□□□ -1.9
RBM39-227ENST00000470563 FRYQ5TBA9 3013 aa3.18□□□□□ -1.9
RBM39-227ENST00000470563 PTPRZ1P23471 2315 aaPredicted RBP3.18□□□□□ -1.9
RBM39-227ENST00000470563 TRBV6-8A0A0A6YYG3 113 aa3.18□□□□□ -1.9
RBM39-227ENST00000470563 IGHV6-1A0A0B4J1U7 121 aa3.18□□□□□ -1.9
RBM39-227ENST00000470563 LRCOL1A6NCL2 159 aa3.18□□□□□ -1.9
RBM39-227ENST00000470563 HTN1P15515 57 aa3.18□□□□□ -1.9
RBM39-227ENST00000470563 C1orf158Q8N1D5 194 aa3.18□□□□□ -1.9
RBM39-227ENST00000470563 PRO0628Q9UI54 55 aa3.18□□□□□ -1.9
RBM39-227ENST00000470563 MAP1BP46821 2468 aaKnown RBP3.18□□□□□ -1.9
RBM39-227ENST00000470563 SPEGQ15772 3267 aa3.18□□□□□ -1.9
RBM39-227ENST00000470563 FRYLO94915 3013 aa3.17□□□□□ -1.9
RBM39-227ENST00000470563 CR1P17927 2039 aa3.17□□□□□ -1.9
RBM39-227ENST00000470563 ZZEF1O43149 2961 aa3.17□□□□□ -1.9
RBM39-227ENST00000470563 TRGV4A0A0C4DH28 118 aa3.17□□□□□ -1.9
RBM39-227ENST00000470563 TRBV7-6A0A0J9YX20 115 aa3.17□□□□□ -1.9
RBM39-227ENST00000470563 LINC00959A0A1B0GUT2 108 aa3.17□□□□□ -1.9
RBM39-227ENST00000470563 A0A1B0GW54 56 aa3.17□□□□□ -1.9
RBM39-227ENST00000470563 NCR3O14931 201 aa3.17□□□□□ -1.9
RBM39-227ENST00000470563 XCL1P47992 114 aa3.17□□□□□ -1.9
RBM39-227ENST00000470563 RBM3P98179 157 aaKnown RBP3.17□□□□□ -1.9
RBM39-227ENST00000470563 LINC00483Q53H64 154 aa3.17□□□□□ -1.9
RBM39-227ENST00000470563 Q5XG85 94 aa3.17□□□□□ -1.9
RBM39-227ENST00000470563 Q6ZQT0 140 aa3.17□□□□□ -1.9
RBM39-227ENST00000470563 TOMM7Q9P0U1 55 aa3.17□□□□□ -1.9
RBM39-227ENST00000470563 HIVEP3Q5T1R4 2406 aa3.17□□□□□ -1.9
RBM39-227ENST00000470563 FREM2Q5SZK8 3169 aa3.16□□□□□ -1.9
RBM39-227ENST00000470563 TRGV2A0A075B6R0 118 aa3.16□□□□□ -1.9
RBM39-227ENST00000470563 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.16□□□□□ -1.9
RBM39-227ENST00000470563 LINC00575Q6W349 94 aa3.16□□□□□ -1.9
RBM39-227ENST00000470563 Q6ZTI0 123 aa3.16□□□□□ -1.9
RBM39-227ENST00000470563 DSCR8Q96T75 97 aa3.16□□□□□ -1.9
RBM39-227ENST00000470563 VPS13AQ96RL7 3174 aa3.16□□□□□ -1.9
RBM39-227ENST00000470563 A0A087WVE0 104 aa3.15□□□□□ -1.91
RBM39-227ENST00000470563 A0A096LNT2 108 aa3.15□□□□□ -1.91
RBM39-227ENST00000470563 GVQW2A0A096LPI5 108 aaPredicted RBP3.15□□□□□ -1.91
RBM39-227ENST00000470563 H7BZZ5 65 aa3.15□□□□□ -1.91
RBM39-227ENST00000470563 ENHOQ6UWT2 76 aa3.15□□□□□ -1.91
RBM39-227ENST00000470563 FAM19A1Q7Z5A9 133 aa3.15□□□□□ -1.91
RBM39-227ENST00000470563 C20orf197Q8N268 126 aa3.15□□□□□ -1.91
RBM39-227ENST00000470563 LAMTOR3Q9UHA4 124 aa3.15□□□□□ -1.91
RBM39-227ENST00000470563 SPTA1P02549 2419 aa3.15□□□□□ -1.91
RBM39-227ENST00000470563 DSPP15924 2871 aaKnown RBP3.14□□□□□ -1.91
RBM39-227ENST00000470563 SORL1Q92673 2214 aa3.14□□□□□ -1.91
RBM39-227ENST00000470563 TRAV23DV6A0A075B6W5 121 aa3.14□□□□□ -1.91
RBM39-227ENST00000470563 PRB2P02812 416 aaPredicted RBP3.14□□□□□ -1.91
RBM39-227ENST00000470563 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
RBM39-227ENST00000470563 C10orf99Q6UWK7 81 aa3.14□□□□□ -1.91
RBM39-227ENST00000470563 CYSTM1Q9H1C7 97 aa3.14□□□□□ -1.91
RBM39-227ENST00000470563 NOP10Q9NPE3 64 aaKnown RBP3.14□□□□□ -1.91
RBM39-227ENST00000470563 COL6A3P12111 3177 aa3.14□□□□□ -1.91
RBM39-227ENST00000470563 ANKRD11Q6UB99 2663 aaPredicted RBP3.14□□□□□ -1.91
RBM39-227ENST00000470563 NBEAQ8NFP9 2946 aa3.13□□□□□ -1.91
RBM39-227ENST00000470563 MYO15AQ9UKN7 3530 aa3.13□□□□□ -1.91
RBM39-227ENST00000470563 TRBV7-4A0A0J9YYF1 115 aa3.13□□□□□ -1.91
RBM39-227ENST00000470563 C19orf84I3L1E1 186 aa3.13□□□□□ -1.91
RBM39-227ENST00000470563 IGLV6-57P01721 117 aa3.13□□□□□ -1.91
RBM39-227ENST00000470563 HRCT1Q6UXD1 115 aa3.13□□□□□ -1.91
RBM39-227ENST00000470563 DIRC1Q969H9 104 aa3.13□□□□□ -1.91
RBM39-227ENST00000470563 TNRC18O15417 2968 aaPredicted RBP3.12□□□□□ -1.91
RBM39-227ENST00000470563 EYSQ5T1H1 3165 aa3.12□□□□□ -1.91
RBM39-227ENST00000470563 CFAP54Q96N23 3096 aa3.12□□□□□ -1.91
RBM39-227ENST00000470563 TLN1Q9Y490 2541 aaKnown RBP3.12□□□□□ -1.91
RBM39-227ENST00000470563 COX7BP24311 80 aa3.12□□□□□ -1.91
RBM39-227ENST00000470563 DEFB136Q30KP8 78 aa3.12□□□□□ -1.91
RBM39-227ENST00000470563 ST20-AS1Q8NBB2 130 aa3.12□□□□□ -1.91
RBM39-227ENST00000470563 PRO0255Q9UI72 69 aa3.12□□□□□ -1.91
RBM39-227ENST00000470563 PRUNE2Q8WUY3 3088 aa3.11□□□□□ -1.91
RBM39-227ENST00000470563 MIFP14174 115 aa3.11□□□□□ -1.91
RBM39-227ENST00000470563 C4orf26Q17RF5 130 aa3.11□□□□□ -1.91
RBM39-227ENST00000470563 C11orf68Q9H3H3 251 aaKnown RBP3.11□□□□□ -1.91
RBM39-227ENST00000470563 SPTAN1Q13813 2472 aaKnown RBP3.11□□□□□ -1.91
RBM39-227ENST00000470563 PRRC2CQ9Y520 2896 aaKnown RBP3.1□□□□□ -1.91
RBM39-227ENST00000470563 AKAP6Q13023 2319 aa3.1□□□□□ -1.91
RBM39-227ENST00000470563 F8WEM9 126 aa3.1□□□□□ -1.91
RBM39-227ENST00000470563 NDUFS5O43920 106 aa3.1□□□□□ -1.91
RBM39-227ENST00000470563 IGLV1-51P01701 117 aa3.1□□□□□ -1.91
RBM39-227ENST00000470563 PRM2P04554 102 aa3.1□□□□□ -1.91
RBM39-227ENST00000470563 ELOF1P60002 83 aaKnown RBP3.1□□□□□ -1.91
RBM39-227ENST00000470563 HAMPP81172 84 aa3.1□□□□□ -1.91
RBM39-227ENST00000470563 NREPQ16612 68 aa3.1□□□□□ -1.91
RBM39-227ENST00000470563 BDP1A6H8Y1 2624 aa3.1□□□□□ -1.91
RBM39-227ENST00000470563 HRNRQ86YZ3 2850 aaPredicted RBP3.09□□□□□ -1.91
RBM39-227ENST00000470563 CACNA1AO00555 2505 aa3.09□□□□□ -1.91
RBM39-227ENST00000470563 IGKV3OR2-268A0A0C4DH90 116 aa3.09□□□□□ -1.91
RBM39-227ENST00000470563 SPAG11BQ08648 103 aa3.09□□□□□ -1.91
RBM39-227ENST00000470563 Q6ZQY7 126 aa3.09□□□□□ -1.91
RBM39-227ENST00000470563 TMEM254Q8TBM7 123 aa3.09□□□□□ -1.91
RBM39-227ENST00000470563 C16orf95Q9H693 158 aa3.09□□□□□ -1.91
RBM39-227ENST00000470563 CFAP47Q6ZTR5 3102 aa3.09□□□□□ -1.92
RBM39-227ENST00000470563 CELSR3Q9NYQ7 3312 aa3.08□□□□□ -1.92
RBM39-227ENST00000470563 SPRR5A0A1B0GTR4 108 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms