RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 KMT2BQ9UMN6 2715 aaPredicted RBP1.56□□□□□ -2.16
VPS8-215ENST00000460158 TRBV30A0A0K0K1B3 111 aa1.56□□□□□ -2.16
VPS8-215ENST00000460158 J3QRE1 110 aa1.56□□□□□ -2.16
VPS8-215ENST00000460158 HMGA1P17096 107 aaKnown RBP1.56□□□□□ -2.16
VPS8-215ENST00000460158 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.56□□□□□ -2.16
VPS8-215ENST00000460158 LINC00472Q9H8W2 130 aa1.56□□□□□ -2.16
VPS8-215ENST00000460158 KIAA0586Q9BVV6 1533 aa1.56□□□□□ -2.16
VPS8-215ENST00000460158 ERCC6L2Q5T890 1561 aa1.55□□□□□ -2.16
VPS8-215ENST00000460158 A0A1B0GU69 56 aa1.55□□□□□ -2.16
VPS8-215ENST00000460158 FCER1GP30273 86 aa1.55□□□□□ -2.16
VPS8-215ENST00000460158 SMIM11BQ8TCY0 68 aa1.55□□□□□ -2.16
VPS8-215ENST00000460158 FAM208AQ9UK61 1670 aaKnown RBP1.55□□□□□ -2.16
VPS8-215ENST00000460158 LRRC37AA6NMS7 1700 aa1.54□□□□□ -2.16
VPS8-215ENST00000460158 CDC42BPAQ5VT25 1732 aa1.54□□□□□ -2.16
VPS8-215ENST00000460158 ASCC3Q8N3C0 2202 aaKnown RBP1.54□□□□□ -2.16
VPS8-215ENST00000460158 NCR3O14931 201 aa1.54□□□□□ -2.16
VPS8-215ENST00000460158 HAMPP81172 84 aa1.54□□□□□ -2.16
VPS8-215ENST00000460158 C10orf99Q6UWK7 81 aa1.54□□□□□ -2.16
VPS8-215ENST00000460158 KRTAP13-1Q8IUC0 172 aa1.54□□□□□ -2.16
VPS8-215ENST00000460158 TOMM5Q8N4H5 51 aa1.54□□□□□ -2.16
VPS8-215ENST00000460158 UBL5Q9BZL1 73 aa1.54□□□□□ -2.16
VPS8-215ENST00000460158 TOGARAM1Q9Y4F4 1720 aa1.54□□□□□ -2.16
VPS8-215ENST00000460158 PRH1P02810 166 aa1.53□□□□□ -2.16
VPS8-215ENST00000460158 EFCAB6Q5THR3 1501 aa1.53□□□□□ -2.16
VPS8-215ENST00000460158 Q6ZRX8 168 aa1.53□□□□□ -2.16
VPS8-215ENST00000460158 DDX60Q8IY21 1712 aaKnown RBP1.53□□□□□ -2.16
VPS8-215ENST00000460158 ENHOQ6UWT2 76 aa1.52□□□□□ -2.17
VPS8-215ENST00000460158 UNQ6190/PRO20217Q6UXQ8 127 aa1.52□□□□□ -2.17
VPS8-215ENST00000460158 ZCCHC13Q8WW36 166 aaKnown RBP1.52□□□□□ -2.17
VPS8-215ENST00000460158 PLAC4Q8WY50 150 aa1.52□□□□□ -2.17
VPS8-215ENST00000460158 ZFHX3Q15911 3703 aa1.52□□□□□ -2.17
VPS8-215ENST00000460158 ABCC8Q09428 1581 aa1.51□□□□□ -2.17
VPS8-215ENST00000460158 TNCP24821 2201 aa1.51□□□□□ -2.17
VPS8-215ENST00000460158 GVQW2A0A096LPI5 108 aaPredicted RBP1.51□□□□□ -2.17
VPS8-215ENST00000460158 PIN1P1O15428 100 aa1.51□□□□□ -2.17
VPS8-215ENST00000460158 RPL38P63173 70 aaKnown RBP1.51□□□□□ -2.17
VPS8-215ENST00000460158 SPINK13Q1W4C9 94 aa1.51□□□□□ -2.17
VPS8-215ENST00000460158 NCBP2-AS2Q69YL0 99 aa1.51□□□□□ -2.17
VPS8-215ENST00000460158 LINC00575Q6W349 94 aa1.51□□□□□ -2.17
VPS8-215ENST00000460158 URB1O60287 2271 aaKnown RBP1.51□□□□□ -2.17
VPS8-215ENST00000460158 SSC5DA1L4H1 1573 aa1.51□□□□□ -2.17
VPS8-215ENST00000460158 LCE6AA0A183 80 aa1.5□□□□□ -2.17
VPS8-215ENST00000460158 NDUFA4O00483 81 aa1.5□□□□□ -2.17
VPS8-215ENST00000460158 COX7BP24311 80 aa1.5□□□□□ -2.17
VPS8-215ENST00000460158 NWD1Q149M9 1564 aa1.5□□□□□ -2.17
VPS8-215ENST00000460158 A0A096LNT2 108 aa1.49□□□□□ -2.17
VPS8-215ENST00000460158 G3V318 75 aa1.49□□□□□ -2.17
VPS8-215ENST00000460158 DEFB103AP81534 67 aa1.49□□□□□ -2.17
VPS8-215ENST00000460158 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
VPS8-215ENST00000460158 SSBP3-AS1Q7Z2R9 100 aa1.49□□□□□ -2.17
VPS8-215ENST00000460158 NMES1Q9C002 83 aa1.49□□□□□ -2.17
VPS8-215ENST00000460158 SLIT1O75093 1534 aa1.49□□□□□ -2.17
VPS8-215ENST00000460158 TECTAO75443 2155 aa1.48□□□□□ -2.17
VPS8-215ENST00000460158 LINC00959A0A1B0GUT2 108 aa1.48□□□□□ -2.17
VPS8-215ENST00000460158 SERF2P84101 59 aa1.48□□□□□ -2.17
VPS8-215ENST00000460158 KRTAP6-3Q3LI67 103 aa1.48□□□□□ -2.17
VPS8-215ENST00000460158 CMC2Q9NRP2 79 aa1.48□□□□□ -2.17
VPS8-215ENST00000460158 AGLP35573 1532 aa1.48□□□□□ -2.17
VPS8-215ENST00000460158 KNTC1P50748 2209 aa1.48□□□□□ -2.17
VPS8-215ENST00000460158 AHCTF1Q8WYP5 2266 aa1.47□□□□□ -2.17
VPS8-215ENST00000460158 TRPM2O94759 1503 aa1.47□□□□□ -2.17
VPS8-215ENST00000460158 LY6G6CO95867 125 aa1.47□□□□□ -2.17
VPS8-215ENST00000460158 KRTAP12-3P60328 96 aa1.47□□□□□ -2.17
VPS8-215ENST00000460158 KRTAP13-4Q3LI77 160 aa1.47□□□□□ -2.17
VPS8-215ENST00000460158 UBE2DNLQ8IWF7 75 aa1.46□□□□□ -2.18
VPS8-215ENST00000460158 CACNA1GO43497 2377 aa1.45□□□□□ -2.18
VPS8-215ENST00000460158 BAHCC1Q9P281 2608 aa1.45□□□□□ -2.18
VPS8-215ENST00000460158 K7EMI3 77 aa1.45□□□□□ -2.18
VPS8-215ENST00000460158 RPL37P61927 97 aaKnown RBP1.45□□□□□ -2.18
VPS8-215ENST00000460158 ABRACLQ9P1F3 81 aa1.45□□□□□ -2.18
VPS8-215ENST00000460158 ASXL3Q9C0F0 2248 aa1.45□□□□□ -2.18
VPS8-215ENST00000460158 TNRC6CQ9HCJ0 1690 aaKnown RBP1.45□□□□□ -2.18
VPS8-215ENST00000460158 C4AP0C0L4 1744 aa1.44□□□□□ -2.18
VPS8-215ENST00000460158 C4BP0C0L5 1744 aa1.44□□□□□ -2.18
VPS8-215ENST00000460158 SPTY2D1-AS1A0A0U1RR47 76 aa1.44□□□□□ -2.18
VPS8-215ENST00000460158 M0R1W7 72 aa1.44□□□□□ -2.18
VPS8-215ENST00000460158 PLNP26678 52 aa1.44□□□□□ -2.18
VPS8-215ENST00000460158 FBN1P35555 2871 aaKnown RBP1.43□□□□□ -2.18
VPS8-215ENST00000460158 CPSF4LA6NMK7 179 aaKnown RBP1.43□□□□□ -2.18
VPS8-215ENST00000460158 ARL14EPLP0DKL9 152 aa1.43□□□□□ -2.18
VPS8-215ENST00000460158 DEFB114Q30KQ6 69 aa1.43□□□□□ -2.18
VPS8-215ENST00000460158 TULP4Q9NRJ4 1543 aa1.43□□□□□ -2.18
VPS8-215ENST00000460158 ZDBF2Q9HCK1 2354 aa1.43□□□□□ -2.18
VPS8-215ENST00000460158 CACNA1BQ00975 2339 aa1.42□□□□□ -2.18
VPS8-215ENST00000460158 ETDCA0A1B0GVM5 59 aa1.42□□□□□ -2.18
VPS8-215ENST00000460158 MRPL33O75394 65 aaKnown RBP1.42□□□□□ -2.18
VPS8-215ENST00000460158 FXYD6P3P58550 94 aa1.42□□□□□ -2.18
VPS8-215ENST00000460158 KRTAP12-4P60329 112 aa1.42□□□□□ -2.18
VPS8-215ENST00000460158 DEPDC5O75140 1603 aa1.41□□□□□ -2.18
VPS8-215ENST00000460158 NAV3Q8IVL0 2385 aa1.41□□□□□ -2.18
VPS8-215ENST00000460158 KCNQ1DNQ9H478 68 aa1.41□□□□□ -2.18
VPS8-215ENST00000460158 IQGAP1P46940 1657 aa1.41□□□□□ -2.18
VPS8-215ENST00000460158 FLG2Q5D862 2391 aaPredicted RBP1.4□□□□□ -2.19
VPS8-215ENST00000460158 SMIM27A0A1W2PRY6 76 aa1.4□□□□□ -2.19
VPS8-215ENST00000460158 I3L3M4 83 aa1.4□□□□□ -2.19
VPS8-215ENST00000460158 ANGP03950 147 aaKnown RBP1.4□□□□□ -2.19
VPS8-215ENST00000460158 PCOTHQ58A44 107 aa1.4□□□□□ -2.19
VPS8-215ENST00000460158 DOPEY2Q9Y3R5 2298 aa1.4□□□□□ -2.19
VPS8-215ENST00000460158 GOLGA4Q13439 2230 aaKnown RBP1.39□□□□□ -2.19
VPS8-215ENST00000460158 PRB1P04280 392 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms