RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 COL4A4P53420 1690 aaPredicted RBP1.97□□□□□ -2.09
HMGB3P30-201ENST00000457863 PRH1P02810 166 aa1.97□□□□□ -2.09
HMGB3P30-201ENST00000457863 ENHOQ6UWT2 76 aa1.97□□□□□ -2.09
HMGB3P30-201ENST00000457863 Q6ZQY7 126 aa1.97□□□□□ -2.09
HMGB3P30-201ENST00000457863 CCL19Q99731 98 aa1.97□□□□□ -2.09
HMGB3P30-201ENST00000457863 ICE1Q9Y2F5 2266 aa1.96□□□□□ -2.1
HMGB3P30-201ENST00000457863 LINC00959A0A1B0GUT2 108 aa1.96□□□□□ -2.1
HMGB3P30-201ENST00000457863 DEFB112Q30KQ8 113 aa1.96□□□□□ -2.1
HMGB3P30-201ENST00000457863 OBSCN-AS1Q96MR7 158 aa1.96□□□□□ -2.1
HMGB3P30-201ENST00000457863 GAFA1Q96PS6 74 aa1.96□□□□□ -2.1
HMGB3P30-201ENST00000457863 TOGARAM1Q9Y4F4 1720 aa1.96□□□□□ -2.1
HMGB3P30-201ENST00000457863 IQGAP1P46940 1657 aa1.96□□□□□ -2.1
HMGB3P30-201ENST00000457863 FCER1GP30273 86 aa1.95□□□□□ -2.1
HMGB3P30-201ENST00000457863 LCE1CQ5T751 118 aa1.95□□□□□ -2.1
HMGB3P30-201ENST00000457863 LCE1BQ5T7P3 118 aa1.95□□□□□ -2.1
HMGB3P30-201ENST00000457863 C10orf99Q6UWK7 81 aa1.95□□□□□ -2.1
HMGB3P30-201ENST00000457863 LRRC37AA6NMS7 1700 aa1.94□□□□□ -2.1
HMGB3P30-201ENST00000457863 SSC5DA1L4H1 1573 aa1.94□□□□□ -2.1
HMGB3P30-201ENST00000457863 PLXNB2O15031 1838 aa1.94□□□□□ -2.1
HMGB3P30-201ENST00000457863 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.94□□□□□ -2.1
HMGB3P30-201ENST00000457863 PP632Q6XCG6 107 aa1.94□□□□□ -2.1
HMGB3P30-201ENST00000457863 UBL5Q9BZL1 73 aa1.94□□□□□ -2.1
HMGB3P30-201ENST00000457863 ATP7AQ04656 1500 aa1.93□□□□□ -2.1
HMGB3P30-201ENST00000457863 A0A1B0GU69 56 aa1.93□□□□□ -2.1
HMGB3P30-201ENST00000457863 G3V318 75 aa1.93□□□□□ -2.1
HMGB3P30-201ENST00000457863 K7EMI3 77 aa1.93□□□□□ -2.1
HMGB3P30-201ENST00000457863 CADP27708 2225 aa1.93□□□□□ -2.1
HMGB3P30-201ENST00000457863 DEPDC5O75140 1603 aa1.92□□□□□ -2.1
HMGB3P30-201ENST00000457863 DDX60Q8IY21 1712 aaKnown RBP1.92□□□□□ -2.1
HMGB3P30-201ENST00000457863 KRTAP10-1P60331 282 aa1.92□□□□□ -2.1
HMGB3P30-201ENST00000457863 TULP4Q9NRJ4 1543 aa1.91□□□□□ -2.1
HMGB3P30-201ENST00000457863 A0A096LNT2 108 aa1.91□□□□□ -2.1
HMGB3P30-201ENST00000457863 GVQW2A0A096LPI5 108 aaPredicted RBP1.91□□□□□ -2.1
HMGB3P30-201ENST00000457863 NDUFA4O00483 81 aa1.91□□□□□ -2.1
HMGB3P30-201ENST00000457863 NCR3O14931 201 aa1.91□□□□□ -2.1
HMGB3P30-201ENST00000457863 SMIM11BQ8TCY0 68 aa1.91□□□□□ -2.1
HMGB3P30-201ENST00000457863 ABRACLQ9P1F3 81 aa1.91□□□□□ -2.1
HMGB3P30-201ENST00000457863 CACNA1GO43497 2377 aa1.91□□□□□ -2.1
HMGB3P30-201ENST00000457863 ANKRD17O75179 2603 aaKnown RBP1.9□□□□□ -2.1
HMGB3P30-201ENST00000457863 COX7BP24311 80 aa1.9□□□□□ -2.11
HMGB3P30-201ENST00000457863 Q6ZRX8 168 aa1.9□□□□□ -2.11
HMGB3P30-201ENST00000457863 C4AP0C0L4 1744 aa1.9□□□□□ -2.11
HMGB3P30-201ENST00000457863 TNCP24821 2201 aa1.9□□□□□ -2.11
HMGB3P30-201ENST00000457863 DEFB114Q30KQ6 69 aa1.89□□□□□ -2.11
HMGB3P30-201ENST00000457863 PLAC4Q8WY50 150 aa1.89□□□□□ -2.11
HMGB3P30-201ENST00000457863 GCC2Q8IWJ2 1684 aa1.88□□□□□ -2.11
HMGB3P30-201ENST00000457863 PLNP26678 52 aa1.88□□□□□ -2.11
HMGB3P30-201ENST00000457863 ASCC3Q8N3C0 2202 aaKnown RBP1.87□□□□□ -2.11
HMGB3P30-201ENST00000457863 SMIM27A0A1W2PRY6 76 aa1.87□□□□□ -2.11
HMGB3P30-201ENST00000457863 IGIPA6NJ69 53 aa1.87□□□□□ -2.11
HMGB3P30-201ENST00000457863 LY6G6CO95867 125 aa1.87□□□□□ -2.11
HMGB3P30-201ENST00000457863 HAMPP81172 84 aa1.87□□□□□ -2.11
HMGB3P30-201ENST00000457863 UNQ6190/PRO20217Q6UXQ8 127 aa1.87□□□□□ -2.11
HMGB3P30-201ENST00000457863 M0R1W7 72 aa1.86□□□□□ -2.11
HMGB3P30-201ENST00000457863 SERF2P84101 59 aa1.86□□□□□ -2.11
HMGB3P30-201ENST00000457863 KCNQ1DNQ9H478 68 aa1.86□□□□□ -2.11
HMGB3P30-201ENST00000457863 PIN1P1O15428 100 aa1.85□□□□□ -2.11
HMGB3P30-201ENST00000457863 ARL14EPLP0DKL9 152 aa1.85□□□□□ -2.11
HMGB3P30-201ENST00000457863 COX6B1P14854 86 aa1.85□□□□□ -2.11
HMGB3P30-201ENST00000457863 LINC00575Q6W349 94 aa1.85□□□□□ -2.11
HMGB3P30-201ENST00000457863 SSBP3-AS1Q7Z2R9 100 aa1.85□□□□□ -2.11
HMGB3P30-201ENST00000457863 TECTAO75443 2155 aa1.85□□□□□ -2.11
HMGB3P30-201ENST00000457863 SAMD9LQ8IVG5 1584 aa1.85□□□□□ -2.11
HMGB3P30-201ENST00000457863 ASXL3Q9C0F0 2248 aa1.85□□□□□ -2.11
HMGB3P30-201ENST00000457863 CLTCL1P53675 1640 aa1.84□□□□□ -2.11
HMGB3P30-201ENST00000457863 C4BP0C0L5 1744 aa1.84□□□□□ -2.11
HMGB3P30-201ENST00000457863 SPRR5A0A1B0GTR4 108 aa1.84□□□□□ -2.11
HMGB3P30-201ENST00000457863 I3L3M4 83 aa1.84□□□□□ -2.11
HMGB3P30-201ENST00000457863 SPINK13Q1W4C9 94 aa1.84□□□□□ -2.11
HMGB3P30-201ENST00000457863 KRTAP13-4Q3LI77 160 aa1.84□□□□□ -2.11
HMGB3P30-201ENST00000457863 URB1O60287 2271 aaKnown RBP1.83□□□□□ -2.12
HMGB3P30-201ENST00000457863 RPL37P61927 97 aaKnown RBP1.83□□□□□ -2.12
HMGB3P30-201ENST00000457863 RPL38P63173 70 aaKnown RBP1.83□□□□□ -2.12
HMGB3P30-201ENST00000457863 DUOX1Q9NRD9 1551 aa1.83□□□□□ -2.12
HMGB3P30-201ENST00000457863 ETDCA0A1B0GVM5 59 aa1.82□□□□□ -2.12
HMGB3P30-201ENST00000457863 LINC01546A6NGU7 62 aa1.82□□□□□ -2.12
HMGB3P30-201ENST00000457863 CPSF4LA6NMK7 179 aaKnown RBP1.82□□□□□ -2.12
HMGB3P30-201ENST00000457863 PRB2P02812 416 aaPredicted RBP1.82□□□□□ -2.12
HMGB3P30-201ENST00000457863 DEFB103AP81534 67 aa1.82□□□□□ -2.12
HMGB3P30-201ENST00000457863 TNRC6CQ9HCJ0 1690 aaKnown RBP1.82□□□□□ -2.12
HMGB3P30-201ENST00000457863 CACNA1BQ00975 2339 aa1.81□□□□□ -2.12
HMGB3P30-201ENST00000457863 PRB1P04280 392 aa1.8□□□□□ -2.12
HMGB3P30-201ENST00000457863 KNTC1P50748 2209 aa1.8□□□□□ -2.12
HMGB3P30-201ENST00000457863 AHCTF1Q8WYP5 2266 aa1.8□□□□□ -2.12
HMGB3P30-201ENST00000457863 LMO7Q8WWI1 1683 aa1.8□□□□□ -2.12
HMGB3P30-201ENST00000457863 ANGP03950 147 aaKnown RBP1.79□□□□□ -2.12
HMGB3P30-201ENST00000457863 ZDBF2Q9HCK1 2354 aa1.79□□□□□ -2.12
HMGB3P30-201ENST00000457863 SPTY2D1-AS1A0A0U1RR47 76 aa1.78□□□□□ -2.12
HMGB3P30-201ENST00000457863 TIMM8BQ9Y5J9 83 aaPredicted RBP1.78□□□□□ -2.12
HMGB3P30-201ENST00000457863 DEFB131BA0A096LNP1 70 aa1.77□□□□□ -2.13
HMGB3P30-201ENST00000457863 BRD3OSQ6XYD6 125 aa1.77□□□□□ -2.13
HMGB3P30-201ENST00000457863 BAHCC1Q9P281 2608 aa1.77□□□□□ -2.13
HMGB3P30-201ENST00000457863 MRPL33O75394 65 aaKnown RBP1.76□□□□□ -2.13
HMGB3P30-201ENST00000457863 PCOTHQ58A44 107 aa1.76□□□□□ -2.13
HMGB3P30-201ENST00000457863 UBE2DNLQ8IWF7 75 aa1.76□□□□□ -2.13
HMGB3P30-201ENST00000457863 LCE3DQ9BYE3 92 aa1.76□□□□□ -2.13
HMGB3P30-201ENST00000457863 CNOT1A5YKK6 2376 aaKnown RBP1.76□□□□□ -2.13
HMGB3P30-201ENST00000457863 NAV3Q8IVL0 2385 aa1.75□□□□□ -2.13
HMGB3P30-201ENST00000457863 KRTAP5-8O75690 187 aa1.75□□□□□ -2.13
HMGB3P30-201ENST00000457863 FXYD6P3P58550 94 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms