RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 RPL37AP8A6NKH3 93 aa13.19□□□□□ -0.3
TRAF4-205ENST00000444415 KRTAP1-4P0C5Y4 121 aa13.17□□□□□ -0.3
TRAF4-205ENST00000444415 DIRC1Q969H9 104 aa13.17□□□□□ -0.3
TRAF4-205ENST00000444415 A0A0U1RRA0 63 aa13.16□□□□□ -0.3
TRAF4-205ENST00000444415 PLNP26678 52 aa13.16□□□□□ -0.3
TRAF4-205ENST00000444415 DPM2O94777 84 aa13.16□□□□□ -0.3
TRAF4-205ENST00000444415 SMIM13P0DJ93 91 aa13.15□□□□□ -0.3
TRAF4-205ENST00000444415 NKAPP1Q8N9T2 125 aa13.15□□□□□ -0.3
TRAF4-205ENST00000444415 NDUFA12Q9UI09 145 aa13.15□□□□□ -0.3
TRAF4-205ENST00000444415 ZNF861PO60384 105 aa13.14□□□□□ -0.31
TRAF4-205ENST00000444415 IGKCP01834 107 aa13.14□□□□□ -0.31
TRAF4-205ENST00000444415 S100A1P23297 94 aa13.14□□□□□ -0.31
TRAF4-205ENST00000444415 LINC00158P58513 81 aa13.14□□□□□ -0.31
TRAF4-205ENST00000444415 MAP1LC3CQ9BXW4 147 aa13.14□□□□□ -0.31
TRAF4-205ENST00000444415 LEPROTO15243 131 aa13.13□□□□□ -0.31
TRAF4-205ENST00000444415 BCE1O60756 84 aa13.13□□□□□ -0.31
TRAF4-205ENST00000444415 COA6Q5JTJ3 125 aaKnown RBP13.13□□□□□ -0.31
TRAF4-205ENST00000444415 IGKV2-28A0A075B6P5 120 aa13.12□□□□□ -0.31
TRAF4-205ENST00000444415 IGKV2D-28P01615 120 aa13.12□□□□□ -0.31
TRAF4-205ENST00000444415 SYS1-DBNDD2H3BUS1 97 aa13.11□□□□□ -0.31
TRAF4-205ENST00000444415 KRTAP13-1Q8IUC0 172 aa13.11□□□□□ -0.31
TRAF4-205ENST00000444415 IGLV1-50A0A075B6I6 118 aa13.1□□□□□ -0.31
TRAF4-205ENST00000444415 ATP6V1G1O75348 118 aa13.1□□□□□ -0.31
TRAF4-205ENST00000444415 HERV-K104P63124 156 aa13.1□□□□□ -0.31
TRAF4-205ENST00000444415 UBR4Q5T4S7 5183 aa13.1□□□□□ -0.31
TRAF4-205ENST00000444415 MIR7-3HGQ8N6C7 128 aa13.1□□□□□ -0.31
TRAF4-205ENST00000444415 PRR26Q8N8Z3 221 aa13.1□□□□□ -0.31
TRAF4-205ENST00000444415 J3QQQ9 107 aa13.09□□□□□ -0.31
TRAF4-205ENST00000444415 MEIG1Q5JSS6 88 aa13.09□□□□□ -0.31
TRAF4-205ENST00000444415 PLEKHB2Q96CS7 222 aa13.09□□□□□ -0.31
TRAF4-205ENST00000444415 LRP2P98164 4655 aa13.08□□□□□ -0.31
TRAF4-205ENST00000444415 MYMXA0A1B0GTQ4 84 aa13.08□□□□□ -0.32
TRAF4-205ENST00000444415 RPL24P83731 157 aaKnown RBP13.08□□□□□ -0.32
TRAF4-205ENST00000444415 LINC01545Q5VT33 79 aa13.07□□□□□ -0.32
TRAF4-205ENST00000444415 TMEM238C9JI98 176 aa13.06□□□□□ -0.32
TRAF4-205ENST00000444415 C3orf79P0CE67 100 aa13.04□□□□□ -0.32
TRAF4-205ENST00000444415 HERVK_113P61574 105 aa13.04□□□□□ -0.32
TRAF4-205ENST00000444415 DAND5Q8N907 189 aa13.04□□□□□ -0.32
TRAF4-205ENST00000444415 E9PLD3 99 aa13.04□□□□□ -0.32
TRAF4-205ENST00000444415 M0R378 163 aa13.04□□□□□ -0.32
TRAF4-205ENST00000444415 TMEM126AQ9H061 195 aa13.04□□□□□ -0.32
TRAF4-205ENST00000444415 RPL28P46779 137 aaKnown RBP13.03□□□□□ -0.32
TRAF4-205ENST00000444415 NMUP48645 174 aa13.02□□□□□ -0.33
TRAF4-205ENST00000444415 PET117Q6UWS5 81 aa13.02□□□□□ -0.33
TRAF4-205ENST00000444415 BOD1L2Q8IYS8 172 aa13.02□□□□□ -0.33
TRAF4-205ENST00000444415 LOC107984156A0A0G2JMH3 177 aa13□□□□□ -0.33
TRAF4-205ENST00000444415 LINC00587B1AMM8 73 aa13□□□□□ -0.33
TRAF4-205ENST00000444415 LGALS3P17931 250 aaKnown RBP13□□□□□ -0.33
TRAF4-205ENST00000444415 PRLHP81277 87 aa13□□□□□ -0.33
TRAF4-205ENST00000444415 ARL17AQ8IVW1 177 aa13□□□□□ -0.33
TRAF4-205ENST00000444415 NCR3O14931 201 aa12.98□□□□□ -0.33
TRAF4-205ENST00000444415 EIF4EBP3O60516 100 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-205ENST00000444415 UBE2AP49459 152 aa12.97□□□□□ -0.33
TRAF4-205ENST00000444415 A0A087X002 238 aa12.97□□□□□ -0.33
TRAF4-205ENST00000444415 IGKV2D-26A0A0A0MRZ7 120 aa12.97□□□□□ -0.33
TRAF4-205ENST00000444415 A0A0J9YXY3 114 aa12.97□□□□□ -0.33
TRAF4-205ENST00000444415 KRTDAPP60985 99 aa12.96□□□□□ -0.34
TRAF4-205ENST00000444415 ADAMTSL4-AS1Q5T5F5 129 aa12.96□□□□□ -0.34
TRAF4-205ENST00000444415 SOSTDC1Q6X4U4 206 aa12.96□□□□□ -0.34
TRAF4-205ENST00000444415 FAM19A1Q7Z5A9 133 aa12.96□□□□□ -0.34
TRAF4-205ENST00000444415 LPAP08519 4548 aa12.96□□□□□ -0.34
TRAF4-205ENST00000444415 TTTY13Q9BZ97 58 aa12.94□□□□□ -0.34
TRAF4-205ENST00000444415 ANAPC11Q9NYG5 84 aa12.94□□□□□ -0.34
TRAF4-205ENST00000444415 LITAFQ99732 161 aa12.93□□□□□ -0.34
TRAF4-205ENST00000444415 TRBV10-3A0A0K0K1G6 114 aa12.91□□□□□ -0.34
TRAF4-205ENST00000444415 SPRR1AP35321 89 aa12.91□□□□□ -0.34
TRAF4-205ENST00000444415 KRTAP4-16G5E9R7 235 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-205ENST00000444415 KCNQ1DNQ9H478 68 aa12.91□□□□□ -0.34
TRAF4-205ENST00000444415 PRYO14603 147 aa12.89□□□□□ -0.35
TRAF4-205ENST00000444415 RPL13AP40429 203 aaKnown RBP12.89□□□□□ -0.35
TRAF4-205ENST00000444415 NPC2P61916 151 aa12.89□□□□□ -0.35
TRAF4-205ENST00000444415 KRTAP13-2Q52LG2 175 aa12.88□□□□□ -0.35
TRAF4-205ENST00000444415 HIST3H2BBQ8N257 126 aa12.88□□□□□ -0.35
TRAF4-205ENST00000444415 ANKRD39Q53RE8 183 aa12.87□□□□□ -0.35
TRAF4-205ENST00000444415 TRBV10-2A0A0K0K1G8 114 aa12.86□□□□□ -0.35
TRAF4-205ENST00000444415 ATOH7Q8N100 152 aa12.86□□□□□ -0.35
TRAF4-205ENST00000444415 NDUFC2O95298 119 aa12.85□□□□□ -0.35
TRAF4-205ENST00000444415 LINC00337Q8N6G1 96 aa12.85□□□□□ -0.35
TRAF4-205ENST00000444415 HIST1H2BLQ99880 126 aa12.85□□□□□ -0.35
TRAF4-205ENST00000444415 SPANXB1Q9NS25 103 aaPredicted RBP12.85□□□□□ -0.35
TRAF4-205ENST00000444415 ZNF815PA8K554 130 aa12.85□□□□□ -0.35
TRAF4-205ENST00000444415 CRYGAP11844 174 aa12.84□□□□□ -0.35
TRAF4-205ENST00000444415 MIEN1Q9BRT3 115 aa12.84□□□□□ -0.35
TRAF4-205ENST00000444415 HIGD2AQ9BW72 106 aa12.84□□□□□ -0.35
TRAF4-205ENST00000444415 TIMM17BO60830 172 aa12.83□□□□□ -0.36
TRAF4-205ENST00000444415 IGLV6-57P01721 117 aa12.83□□□□□ -0.36
TRAF4-205ENST00000444415 DDTP30046 118 aa12.83□□□□□ -0.36
TRAF4-205ENST00000444415 LINC00308Q8TCZ7 52 aa12.82□□□□□ -0.36
TRAF4-205ENST00000444415 C20orf202A1L168 122 aa12.81□□□□□ -0.36
TRAF4-205ENST00000444415 FAM229BQ4G0N7 80 aa12.81□□□□□ -0.36
TRAF4-205ENST00000444415 SMCR5Q8TEV8 140 aa12.79□□□□□ -0.36
TRAF4-205ENST00000444415 TYMSOSQ8TAI1 123 aa12.78□□□□□ -0.36
TRAF4-205ENST00000444415 B5MCH6 92 aa12.78□□□□□ -0.36
TRAF4-205ENST00000444415 SPRR4Q96PI1 79 aa12.78□□□□□ -0.36
TRAF4-205ENST00000444415 ETDCA0A1B0GVM5 59 aa12.77□□□□□ -0.37
TRAF4-205ENST00000444415 PCP2Q8IVA1 136 aa12.77□□□□□ -0.37
TRAF4-205ENST00000444415 RNF213Q63HN8 5207 aa12.75□□□□□ -0.37
TRAF4-205ENST00000444415 Q9BRP9 147 aa12.75□□□□□ -0.37
TRAF4-205ENST00000444415 SPANXCQ9NY87 97 aa12.75□□□□□ -0.37
TRAF4-205ENST00000444415 ERC2-IT1O76042 136 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms