RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 LINC00269Q8N2A0 174 aa7.79□□□□□ -1.16
SEC61A1-202ENST00000424880 HECTD1Q9ULT8 2610 aa7.79□□□□□ -1.16
SEC61A1-202ENST00000424880 STHQ8IWL8 128 aa7.79□□□□□ -1.16
SEC61A1-202ENST00000424880 TRGV4A0A0C4DH28 118 aa7.78□□□□□ -1.16
SEC61A1-202ENST00000424880 TRBV10-1A0A0K0K1A3 114 aa7.78□□□□□ -1.16
SEC61A1-202ENST00000424880 Q6ZQT0 140 aa7.78□□□□□ -1.16
SEC61A1-202ENST00000424880 B4DSR2 109 aa7.78□□□□□ -1.16
SEC61A1-202ENST00000424880 MTORP42345 2549 aa7.78□□□□□ -1.16
SEC61A1-202ENST00000424880 ODF3L2Q3SX64 289 aa7.77□□□□□ -1.17
SEC61A1-202ENST00000424880 Q6ZQY7 126 aa7.77□□□□□ -1.17
SEC61A1-202ENST00000424880 TRBV7-4A0A0J9YYF1 115 aa7.76□□□□□ -1.17
SEC61A1-202ENST00000424880 LINC00959A0A1B0GUT2 108 aa7.76□□□□□ -1.17
SEC61A1-202ENST00000424880 DEFB130BP0DP73 79 aa7.76□□□□□ -1.17
SEC61A1-202ENST00000424880 DEFB130AP0DP74 79 aa7.76□□□□□ -1.17
SEC61A1-202ENST00000424880 FLNBO75369 2602 aaKnown RBP7.76□□□□□ -1.17
SEC61A1-202ENST00000424880 ESM1Q9NQ30 184 aa7.75□□□□□ -1.17
SEC61A1-202ENST00000424880 MIFP14174 115 aa7.75□□□□□ -1.17
SEC61A1-202ENST00000424880 TRBV6-8A0A0A6YYG3 113 aa7.74□□□□□ -1.17
SEC61A1-202ENST00000424880 DSCR9P59020 149 aa7.74□□□□□ -1.17
SEC61A1-202ENST00000424880 LOC110117498A0A087WWA1 95 aa7.73□□□□□ -1.17
SEC61A1-202ENST00000424880 CXCL6P80162 114 aa7.73□□□□□ -1.17
SEC61A1-202ENST00000424880 C6orf223Q8N319 242 aa7.73□□□□□ -1.17
SEC61A1-202ENST00000424880 LINC01356Q8N9X3 169 aa7.73□□□□□ -1.17
SEC61A1-202ENST00000424880 IL17DQ8TAD2 202 aa7.73□□□□□ -1.17
SEC61A1-202ENST00000424880 ERC2-IT1O76042 136 aa7.73□□□□□ -1.17
SEC61A1-202ENST00000424880 DEFB114Q30KQ6 69 aa7.73□□□□□ -1.17
SEC61A1-202ENST00000424880 PRR15Q8IV56 129 aa7.73□□□□□ -1.17
SEC61A1-202ENST00000424880 F8P00451 2351 aa7.72□□□□□ -1.17
SEC61A1-202ENST00000424880 NREPQ16612 68 aa7.72□□□□□ -1.17
SEC61A1-202ENST00000424880 UNC79Q9P2D8 2635 aa7.72□□□□□ -1.17
SEC61A1-202ENST00000424880 BPY2O14599 106 aa7.72□□□□□ -1.17
SEC61A1-202ENST00000424880 LINC00575Q6W349 94 aa7.72□□□□□ -1.17
SEC61A1-202ENST00000424880 TMEM254Q8TBM7 123 aa7.72□□□□□ -1.17
SEC61A1-202ENST00000424880 ITPR2Q14571 2701 aa7.71□□□□□ -1.17
SEC61A1-202ENST00000424880 ITPR3Q14573 2671 aa7.71□□□□□ -1.17
SEC61A1-202ENST00000424880 KRTAP1-3Q8IUG1 177 aa7.71□□□□□ -1.18
SEC61A1-202ENST00000424880 IGHV4-31P0DP07 118 aa7.71□□□□□ -1.18
SEC61A1-202ENST00000424880 DEFB113Q30KQ7 82 aa7.71□□□□□ -1.18
SEC61A1-202ENST00000424880 C10orf25Q5T742 122 aa7.71□□□□□ -1.18
SEC61A1-202ENST00000424880 Q6ZRU5 148 aa7.71□□□□□ -1.18
SEC61A1-202ENST00000424880 LINC01006Q8NI28 216 aa7.71□□□□□ -1.18
SEC61A1-202ENST00000424880 HIGD2AQ9BW72 106 aa7.71□□□□□ -1.18
SEC61A1-202ENST00000424880 PDZD2O15018 2839 aa7.7□□□□□ -1.18
SEC61A1-202ENST00000424880 PLAC8L1A1L4L8 177 aa7.7□□□□□ -1.18
SEC61A1-202ENST00000424880 ZNF702PQ9H963 129 aa7.7□□□□□ -1.18
SEC61A1-202ENST00000424880 PRR4Q16378 134 aa7.7□□□□□ -1.18
SEC61A1-202ENST00000424880 XAGE1AQ9HD64 81 aa7.7□□□□□ -1.18
SEC61A1-202ENST00000424880 CELA1Q9UNI1 258 aa7.7□□□□□ -1.18
SEC61A1-202ENST00000424880 ACANP16112 2415 aa7.7□□□□□ -1.18
SEC61A1-202ENST00000424880 PMAIP1Q13794 54 aa7.69□□□□□ -1.18
SEC61A1-202ENST00000424880 ZNF561-AS1K7EIQ3 104 aa7.68□□□□□ -1.18
SEC61A1-202ENST00000424880 ESRGQ1W209 222 aa7.68□□□□□ -1.18
SEC61A1-202ENST00000424880 MUC7Q8TAX7 377 aa7.68□□□□□ -1.18
SEC61A1-202ENST00000424880 CYSRT1A8MQ03 144 aa7.68□□□□□ -1.18
SEC61A1-202ENST00000424880 C3orf84H3BNL1 204 aa7.68□□□□□ -1.18
SEC61A1-202ENST00000424880 UNQ6190/PRO20217Q6UXQ8 127 aa7.68□□□□□ -1.18
SEC61A1-202ENST00000424880 FSHBP01225 129 aa7.67□□□□□ -1.18
SEC61A1-202ENST00000424880 FLNAP21333 2647 aaKnown RBP7.67□□□□□ -1.18
SEC61A1-202ENST00000424880 HIVEP2P31629 2446 aa7.67□□□□□ -1.18
SEC61A1-202ENST00000424880 IGHV4-28A0A0C4DH34 117 aa7.67□□□□□ -1.18
SEC61A1-202ENST00000424880 PSPHP1O15172 72 aa7.67□□□□□ -1.18
SEC61A1-202ENST00000424880 GIG44P09565 113 aaPredicted RBP7.67□□□□□ -1.18
SEC61A1-202ENST00000424880 GYPEP15421 78 aa7.67□□□□□ -1.18
SEC61A1-202ENST00000424880 C9orf66Q5T8R8 295 aa7.66□□□□□ -1.18
SEC61A1-202ENST00000424880 DEFB4AO15263 64 aa7.65□□□□□ -1.18
SEC61A1-202ENST00000424880 Q6ZTC4 211 aa7.65□□□□□ -1.18
SEC61A1-202ENST00000424880 VWFP04275 2813 aa7.65□□□□□ -1.18
SEC61A1-202ENST00000424880 Q8IZM0 81 aa7.65□□□□□ -1.18
SEC61A1-202ENST00000424880 ANGP03950 147 aaKnown RBP7.65□□□□□ -1.19
SEC61A1-202ENST00000424880 PDE6GP18545 87 aa7.65□□□□□ -1.19
SEC61A1-202ENST00000424880 A8MU10 97 aa7.64□□□□□ -1.19
SEC61A1-202ENST00000424880 KIAA0087Q14695 138 aa7.64□□□□□ -1.19
SEC61A1-202ENST00000424880 Q6YL49 198 aa7.64□□□□□ -1.19
SEC61A1-202ENST00000424880 FAM30AQ9NZY2 134 aa7.64□□□□□ -1.19
SEC61A1-202ENST00000424880 KLK12Q9UKR0 248 aa7.64□□□□□ -1.19
SEC61A1-202ENST00000424880 CD164L2Q6UWJ8 174 aa7.64□□□□□ -1.19
SEC61A1-202ENST00000424880 FUSP35637 526 aaKnown RBP eCLIP7.63□□□□□ -1.192e-7■□□□□ 9.2
SEC61A1-202ENST00000424880 CHCHD10Q8WYQ3 142 aaPredicted RBP7.63□□□□□ -1.19
SEC61A1-202ENST00000424880 KRTAP21-3Q3LHN1 58 aa7.62□□□□□ -1.19
SEC61A1-202ENST00000424880 PRYO14603 147 aa7.62□□□□□ -1.19
SEC61A1-202ENST00000424880 PKD1L1Q8TDX9 2849 aa7.62□□□□□ -1.19
SEC61A1-202ENST00000424880 DEFB105AQ8NG35 78 aa7.61□□□□□ -1.19
SEC61A1-202ENST00000424880 Q1T7F1 81 aa7.61□□□□□ -1.19
SEC61A1-202ENST00000424880 CD164Q04900 197 aa7.6□□□□□ -1.19
SEC61A1-202ENST00000424880 ANK3Q12955 4377 aaKnown RBP7.6□□□□□ -1.19
SEC61A1-202ENST00000424880 H3BQ85 93 aa7.59□□□□□ -1.19
SEC61A1-202ENST00000424880 C16orf74Q96GX8 76 aa7.59□□□□□ -1.19
SEC61A1-202ENST00000424880 OCR1Q9BZK8 76 aa7.59□□□□□ -1.19
SEC61A1-202ENST00000424880 LINC00612Q8N6U2 182 aa7.59□□□□□ -1.19
SEC61A1-202ENST00000424880 REG3AQ06141 175 aa7.58□□□□□ -1.2
SEC61A1-202ENST00000424880 hDV103S1A0JD37 113 aa7.57□□□□□ -1.2
SEC61A1-202ENST00000424880 IGKV4-1P06312 121 aa7.57□□□□□ -1.2
SEC61A1-202ENST00000424880 C4orf3Q8WVX3 66 aa7.57□□□□□ -1.2
SEC61A1-202ENST00000424880 OTOGQ6ZRI0 2925 aa7.57□□□□□ -1.2
SEC61A1-202ENST00000424880 SMIM29Q86T20 159 aa7.57□□□□□ -1.2
SEC61A1-202ENST00000424880 SPAG11BQ08648 103 aa7.56□□□□□ -1.2
SEC61A1-202ENST00000424880 COX17Q14061 63 aa7.56□□□□□ -1.2
SEC61A1-202ENST00000424880 KRTAP1-1Q07627 177 aa7.56□□□□□ -1.2
SEC61A1-202ENST00000424880 Q6ZRP5 223 aa7.56□□□□□ -1.2
SEC61A1-202ENST00000424880 CSMD3Q7Z407 3707 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms