RNA–Protein interactions for RNA: ENST00000410940.1

RNU4-78P-201, Transcript of RNA, U4 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU4-78P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-78P-201ENST00000410940 A0A087WXM4 84 aa0.84□□□□□ -2.27
RNU4-78P-201ENST00000410940 WFDC9Q8NEX5 89 aa0.84□□□□□ -2.27
RNU4-78P-201ENST00000410940 USP32Q8NFA0 1604 aa0.84□□□□□ -2.28
RNU4-78P-201ENST00000410940 UGGT2Q9NYU1 1516 aa0.84□□□□□ -2.28
RNU4-78P-201ENST00000410940 Q5BKY6 102 aa0.83□□□□□ -2.28
RNU4-78P-201ENST00000410940 COX6B2Q6YFQ2 88 aa0.83□□□□□ -2.28
RNU4-78P-201ENST00000410940 ZNF462Q96JM2 2506 aa0.83□□□□□ -2.28
RNU4-78P-201ENST00000410940 DUOX2Q9NRD8 1548 aa0.83□□□□□ -2.28
RNU4-78P-201ENST00000410940 AHCTF1Q8WYP5 2266 aa0.82□□□□□ -2.28
RNU4-78P-201ENST00000410940 PPRC1Q5VV67 1664 aaKnown RBP0.82□□□□□ -2.28
RNU4-78P-201ENST00000410940 RGPD1P0DJD0 1748 aa0.82□□□□□ -2.28
RNU4-78P-201ENST00000410940 LTN1O94822 1766 aa0.82□□□□□ -2.28
RNU4-78P-201ENST00000410940 RGPD2P0DJD1 1756 aa0.82□□□□□ -2.28
RNU4-78P-201ENST00000410940 TIAM2Q8IVF5 1701 aa0.81□□□□□ -2.28
RNU4-78P-201ENST00000410940 CD163L1Q9NR16 1453 aa0.81□□□□□ -2.28
RNU4-78P-201ENST00000410940 LCE6AA0A183 80 aa0.81□□□□□ -2.28
RNU4-78P-201ENST00000410940 CPSF4LA6NMK7 179 aaKnown RBP0.81□□□□□ -2.28
RNU4-78P-201ENST00000410940 PREX1Q8TCU6 1659 aa0.81□□□□□ -2.28
RNU4-78P-201ENST00000410940 POLR1AO95602 1720 aaPredicted RBP0.81□□□□□ -2.28
RNU4-78P-201ENST00000410940 LRRIQ1Q96JM4 1722 aa0.81□□□□□ -2.28
RNU4-78P-201ENST00000410940 TENM1Q9UKZ4 2725 aa0.8□□□□□ -2.28
RNU4-78P-201ENST00000410940 MRPL34Q9BQ48 92 aaKnown RBP0.8□□□□□ -2.28
RNU4-78P-201ENST00000410940 TTC28Q96AY4 2481 aa0.79□□□□□ -2.28
RNU4-78P-201ENST00000410940 COL14A1Q05707 1796 aaKnown RBP0.79□□□□□ -2.28
RNU4-78P-201ENST00000410940 SPINK4O60575 86 aa0.79□□□□□ -2.28
RNU4-78P-201ENST00000410940 SPINK1P00995 79 aa0.79□□□□□ -2.28
RNU4-78P-201ENST00000410940 PRH1P02810 166 aa0.79□□□□□ -2.28
RNU4-78P-201ENST00000410940 DEFA5Q01523 94 aa0.79□□□□□ -2.28
RNU4-78P-201ENST00000410940 MEGF8Q7Z7M0 2845 aa0.79□□□□□ -2.28
RNU4-78P-201ENST00000410940 CFAP43Q8NDM7 1665 aa0.78□□□□□ -2.28
RNU4-78P-201ENST00000410940 CACNA1HO95180 2353 aa0.78□□□□□ -2.28
RNU4-78P-201ENST00000410940 IFI6P09912 130 aa0.78□□□□□ -2.28
RNU4-78P-201ENST00000410940 SPRR1AP35321 89 aa0.78□□□□□ -2.28
RNU4-78P-201ENST00000410940 SMR3AQ99954 134 aa0.78□□□□□ -2.28
RNU4-78P-201ENST00000410940 NWD1Q149M9 1564 aa0.78□□□□□ -2.29
RNU4-78P-201ENST00000410940 EIF2AK4Q9P2K8 1649 aaKnown RBP0.78□□□□□ -2.29
RNU4-78P-201ENST00000410940 SCN11AQ9UI33 1791 aa0.78□□□□□ -2.29
RNU4-78P-201ENST00000410940 UBR3Q6ZT12 1888 aa0.78□□□□□ -2.29
RNU4-78P-201ENST00000410940 ANKRD36A6QL64 1941 aa0.77□□□□□ -2.29
RNU4-78P-201ENST00000410940 SPRR1BP22528 89 aa0.77□□□□□ -2.29
RNU4-78P-201ENST00000410940 NREPQ16612 68 aa0.77□□□□□ -2.29
RNU4-78P-201ENST00000410940 MYO5CQ9NQX4 1742 aa0.77□□□□□ -2.29
RNU4-78P-201ENST00000410940 PKD1L2Q7Z442 2459 aa0.76□□□□□ -2.29
RNU4-78P-201ENST00000410940 ARFGEF2Q9Y6D5 1785 aa0.76□□□□□ -2.29
RNU4-78P-201ENST00000410940 IQGAP3Q86VI3 1631 aa0.76□□□□□ -2.29
RNU4-78P-201ENST00000410940 THOC2Q8NI27 1593 aaKnown RBP0.76□□□□□ -2.29
RNU4-78P-201ENST00000410940 ERICH3Q5RHP9 1530 aa0.76□□□□□ -2.29
RNU4-78P-201ENST00000410940 DEFB109BQ30KR1 87 aa0.76□□□□□ -2.29
RNU4-78P-201ENST00000410940 GOLGA4Q13439 2230 aaKnown RBP0.76□□□□□ -2.29
RNU4-78P-201ENST00000410940 BCORQ6W2J9 1755 aa0.75□□□□□ -2.29
RNU4-78P-201ENST00000410940 DNMBPQ6XZF7 1577 aa0.75□□□□□ -2.29
RNU4-78P-201ENST00000410940 MACF1Q9UPN3 7388 aaKnown RBP0.75□□□□□ -2.29
RNU4-78P-201ENST00000410940 HEPN1Q6WQI6 88 aa0.75□□□□□ -2.29
RNU4-78P-201ENST00000410940 DEFB105AQ8NG35 78 aa0.75□□□□□ -2.29
RNU4-78P-201ENST00000410940 CACNA1AO00555 2505 aa0.75□□□□□ -2.29
RNU4-78P-201ENST00000410940 CICQ96RK0 1608 aaPredicted RBP0.75□□□□□ -2.29
RNU4-78P-201ENST00000410940 LMTK2Q8IWU2 1503 aa0.74□□□□□ -2.29
RNU4-78P-201ENST00000410940 ANKRD17O75179 2603 aaKnown RBP0.74□□□□□ -2.29
RNU4-78P-201ENST00000410940 SMIM31A0A1B0GVY4 71 aa0.74□□□□□ -2.29
RNU4-78P-201ENST00000410940 FBN2P35556 2912 aa0.74□□□□□ -2.29
RNU4-78P-201ENST00000410940 RALGAPBQ86X10 1494 aa0.73□□□□□ -2.29
RNU4-78P-201ENST00000410940 FMN2Q9NZ56 1722 aa0.73□□□□□ -2.29
RNU4-78P-201ENST00000410940 CDKN2A-AS1Q9UH64 79 aa0.73□□□□□ -2.29
RNU4-78P-201ENST00000410940 ADAMTS12P58397 1594 aa0.73□□□□□ -2.29
RNU4-78P-201ENST00000410940 EFCAB5A4FU69 1503 aa0.73□□□□□ -2.29
RNU4-78P-201ENST00000410940 HFM1A2PYH4 1435 aa0.72□□□□□ -2.29
RNU4-78P-201ENST00000410940 ZNF831Q5JPB2 1677 aa0.72□□□□□ -2.29
RNU4-78P-201ENST00000410940 KRTAP2-3P0C7H8 128 aa0.72□□□□□ -2.29
RNU4-78P-201ENST00000410940 KRTAP2-4Q9BYR9 128 aa0.72□□□□□ -2.29
RNU4-78P-201ENST00000410940 KRTAP2-1Q9BYU5 128 aa0.72□□□□□ -2.29
RNU4-78P-201ENST00000410940 NESP48681 1621 aa0.71□□□□□ -2.3
RNU4-78P-201ENST00000410940 NOTCH1P46531 2555 aa0.71□□□□□ -2.3
RNU4-78P-201ENST00000410940 NDUFA4O00483 81 aa0.71□□□□□ -2.3
RNU4-78P-201ENST00000410940 DOT1LQ8TEK3 1739 aa0.71□□□□□ -2.3
RNU4-78P-201ENST00000410940 ZC3H13Q5T200 1668 aaKnown RBP0.71□□□□□ -2.3
RNU4-78P-201ENST00000410940 AHNAKQ09666 5890 aaKnown RBP0.7□□□□□ -2.3
RNU4-78P-201ENST00000410940 PLCH1Q4KWH8 1693 aa0.7□□□□□ -2.3
RNU4-78P-201ENST00000410940 NHSQ6T4R5 1651 aa0.7□□□□□ -2.3
RNU4-78P-201ENST00000410940 TNRC6CQ9HCJ0 1690 aaKnown RBP0.7□□□□□ -2.3
RNU4-78P-201ENST00000410940 MRPL33O75394 65 aaKnown RBP0.7□□□□□ -2.3
RNU4-78P-201ENST00000410940 ATXN8Q156A1 80 aa0.7□□□□□ -2.3
RNU4-78P-201ENST00000410940 U3KQA8 63 aa0.7□□□□□ -2.3
RNU4-78P-201ENST00000410940 TSC2P49815 1807 aa0.7□□□□□ -2.3
RNU4-78P-201ENST00000410940 ABCA12Q86UK0 2595 aa0.7□□□□□ -2.3
RNU4-78P-201ENST00000410940 CDC42BPGQ6DT37 1551 aa0.7□□□□□ -2.3
RNU4-78P-201ENST00000410940 ASXL1Q8IXJ9 1541 aa0.69□□□□□ -2.3
RNU4-78P-201ENST00000410940 SYNE2Q8WXH0 6885 aaKnown RBP0.69□□□□□ -2.3
RNU4-78P-201ENST00000410940 POLQO75417 2590 aa0.69□□□□□ -2.3
RNU4-78P-201ENST00000410940 H3BVH4 76 aa0.69□□□□□ -2.3
RNU4-78P-201ENST00000410940 FXYD6Q9H0Q3 95 aa0.69□□□□□ -2.3
RNU4-78P-201ENST00000410940 SPTBN2O15020 2390 aa0.69□□□□□ -2.3
RNU4-78P-201ENST00000410940 MROH1Q8NDA8 1641 aa0.68□□□□□ -2.3
RNU4-78P-201ENST00000410940 CACNA1EQ15878 2313 aa0.68□□□□□ -2.3
RNU4-78P-201ENST00000410940 PIEZO2Q9H5I5 2752 aa0.68□□□□□ -2.3
RNU4-78P-201ENST00000410940 APLNQ9ULZ1 77 aa0.68□□□□□ -2.3
RNU4-78P-201ENST00000410940 INO80Q9ULG1 1556 aaPredicted RBP0.67□□□□□ -2.3
RNU4-78P-201ENST00000410940 C2CD3Q4AC94 2353 aa0.67□□□□□ -2.3
RNU4-78P-201ENST00000410940 BDP1A6H8Y1 2624 aa0.67□□□□□ -2.3
RNU4-78P-201ENST00000410940 A0A087WWC5 75 aa0.67□□□□□ -2.3
RNU4-78P-201ENST00000410940 C3orf79P0CE67 100 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms