RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 C6orf223Q8N319 242 aa11.26□□□□□ -0.61
LIMS2-208ENST00000410011 SERP2Q8N6R1 65 aa11.26□□□□□ -0.61
LIMS2-208ENST00000410011 LOC110117498A0A087WWA1 95 aa11.26□□□□□ -0.61
LIMS2-208ENST00000410011 ZNF561-AS1K7EIQ3 104 aa11.25□□□□□ -0.61
LIMS2-208ENST00000410011 ENHOQ6UWT2 76 aa11.25□□□□□ -0.61
LIMS2-208ENST00000410011 WIPF1O43516 503 aa11.25□□□□□ -0.61
LIMS2-208ENST00000410011 C3orf56Q8N813 242 aa11.25□□□□□ -0.61
LIMS2-208ENST00000410011 USP17L23D6RBM5 183 aa11.24□□□□□ -0.61
LIMS2-208ENST00000410011 RBM3P98179 157 aaKnown RBP11.24□□□□□ -0.61
LIMS2-208ENST00000410011 KLK12Q9UKR0 248 aa11.24□□□□□ -0.61
LIMS2-208ENST00000410011 ITPR2Q14571 2701 aa11.23□□□□□ -0.61
LIMS2-208ENST00000410011 WFDC9Q8NEX5 89 aa11.23□□□□□ -0.61
LIMS2-208ENST00000410011 UBL5Q9BZL1 73 aa11.23□□□□□ -0.61
LIMS2-208ENST00000410011 A0A087WVE0 104 aa11.23□□□□□ -0.61
LIMS2-208ENST00000410011 Q6ZQT0 140 aa11.23□□□□□ -0.61
LIMS2-208ENST00000410011 GCN1Q92616 2671 aaKnown RBP11.22□□□□□ -0.61
LIMS2-208ENST00000410011 PDE6GP18545 87 aa11.21□□□□□ -0.61
LIMS2-208ENST00000410011 H3BNG1 76 aa11.2□□□□□ -0.62
LIMS2-208ENST00000410011 UPK3BQ9BT76 320 aa11.2□□□□□ -0.62
LIMS2-208ENST00000410011 C6orf48Q9UBA6 75 aa11.2□□□□□ -0.62
LIMS2-208ENST00000410011 NBEAL2Q6ZNJ1 2754 aa11.2□□□□□ -0.62
LIMS2-208ENST00000410011 TRBV7-6A0A0J9YX20 115 aa11.19□□□□□ -0.62
LIMS2-208ENST00000410011 GHRHP01286 108 aa11.19□□□□□ -0.62
LIMS2-208ENST00000410011 HTN3P15516 51 aa11.19□□□□□ -0.62
LIMS2-208ENST00000410011 UNC79Q9P2D8 2635 aa11.19□□□□□ -0.62
LIMS2-208ENST00000410011 TRAV23DV6A0A075B6W5 121 aa11.17□□□□□ -0.62
LIMS2-208ENST00000410011 DIRC1Q969H9 104 aa11.17□□□□□ -0.62
LIMS2-208ENST00000410011 LAMTOR3Q9UHA4 124 aa11.17□□□□□ -0.62
LIMS2-208ENST00000410011 BCE1O60756 84 aa11.16□□□□□ -0.62
LIMS2-208ENST00000410011 RPS28P62857 69 aaKnown RBP11.16□□□□□ -0.62
LIMS2-208ENST00000410011 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.16□□□□□ -0.62
LIMS2-208ENST00000410011 INAFM1C9JVW0 142 aa11.15□□□□□ -0.62
LIMS2-208ENST00000410011 Q6ZQY7 126 aa11.15□□□□□ -0.62
LIMS2-208ENST00000410011 DSCR8Q96T75 97 aa11.15□□□□□ -0.62
LIMS2-208ENST00000410011 TMEM258P61165 79 aa11.14□□□□□ -0.63
LIMS2-208ENST00000410011 EGFEM1PQ0D2K5 195 aa11.14□□□□□ -0.63
LIMS2-208ENST00000410011 KRTAP26-1Q6PEX3 210 aa11.14□□□□□ -0.63
LIMS2-208ENST00000410011 ZNF73O43830 326 aaPredicted RBP11.13□□□□□ -0.63
LIMS2-208ENST00000410011 ELOF1P60002 83 aaKnown RBP11.13□□□□□ -0.63
LIMS2-208ENST00000410011 FAM19A1Q7Z5A9 133 aa11.13□□□□□ -0.63
LIMS2-208ENST00000410011 HELZ2Q9BYK8 2649 aaKnown RBP11.12□□□□□ -0.63
LIMS2-208ENST00000410011 VWFP04275 2813 aa11.12□□□□□ -0.63
LIMS2-208ENST00000410011 VPREB1P12018 145 aa11.12□□□□□ -0.63
LIMS2-208ENST00000410011 COX7BP24311 80 aa11.12□□□□□ -0.63
LIMS2-208ENST00000410011 XAGE1AQ9HD64 81 aa11.11□□□□□ -0.63
LIMS2-208ENST00000410011 F8WDY8 70 aa11.1□□□□□ -0.63
LIMS2-208ENST00000410011 J3KT08 172 aa11.1□□□□□ -0.63
LIMS2-208ENST00000410011 CYSTM1Q9H1C7 97 aa11.1□□□□□ -0.63
LIMS2-208ENST00000410011 TRBV7-4A0A0J9YYF1 115 aa11.1□□□□□ -0.63
LIMS2-208ENST00000410011 M0R378 163 aa11.1□□□□□ -0.63
LIMS2-208ENST00000410011 CAMK2N2Q96S95 79 aa11.1□□□□□ -0.63
LIMS2-208ENST00000410011 LINC01547P58512 204 aaPredicted RBP11.09□□□□□ -0.63
LIMS2-208ENST00000410011 CXCL6P80162 114 aa11.09□□□□□ -0.63
LIMS2-208ENST00000410011 KPRPQ5T749 579 aaPredicted RBP11.09□□□□□ -0.63
LIMS2-208ENST00000410011 Q6ZVQ6 151 aa11.08□□□□□ -0.64
LIMS2-208ENST00000410011 FASNP49327 2511 aaKnown RBP11.08□□□□□ -0.64
LIMS2-208ENST00000410011 WFDC10BQ8IUB3 73 aa11.08□□□□□ -0.64
LIMS2-208ENST00000410011 NDUFC2-KCTD14E9PQ53 114 aa11.07□□□□□ -0.64
LIMS2-208ENST00000410011 M0R2N4 97 aa11.07□□□□□ -0.64
LIMS2-208ENST00000410011 NOTCH2Q04721 2471 aa11.07□□□□□ -0.64
LIMS2-208ENST00000410011 C15orf56Q8N910 161 aa11.06□□□□□ -0.64
LIMS2-208ENST00000410011 Q6ZRU5 148 aa11.05□□□□□ -0.64
LIMS2-208ENST00000410011 HIGD2BQ4VC39 106 aa11.04□□□□□ -0.64
LIMS2-208ENST00000410011 LINC00528Q8N1L1 170 aa11.04□□□□□ -0.64
LIMS2-208ENST00000410011 DPH3Q96FX2 82 aa11.03□□□□□ -0.64
LIMS2-208ENST00000410011 KMT2BQ9UMN6 2715 aaPredicted RBP11.03□□□□□ -0.64
LIMS2-208ENST00000410011 TRAV7A0A075B6U4 112 aa11.02□□□□□ -0.65
LIMS2-208ENST00000410011 HAMPP81172 84 aa11.02□□□□□ -0.65
LIMS2-208ENST00000410011 LOC107984640A0A0U1RRK4 108 aa11.01□□□□□ -0.65
LIMS2-208ENST00000410011 LINC01556Q5JQF7 62 aa11.01□□□□□ -0.65
LIMS2-208ENST00000410011 ESRGQ1W209 222 aa11.01□□□□□ -0.65
LIMS2-208ENST00000410011 Q6ZTC4 211 aa11□□□□□ -0.65
LIMS2-208ENST00000410011 C1orf43Q9BWL3 253 aa11□□□□□ -0.65
LIMS2-208ENST00000410011 NSD1Q96L73 2696 aaPredicted RBP10.99□□□□□ -0.65
LIMS2-208ENST00000410011 Q6ZRP5 223 aa10.98□□□□□ -0.65
LIMS2-208ENST00000410011 TENM1Q9UKZ4 2725 aa10.98□□□□□ -0.65
LIMS2-208ENST00000410011 FAM19A5Q7Z5A7 132 aaPredicted RBP10.96□□□□□ -0.65
LIMS2-208ENST00000410011 KCNQ1DNQ9H478 68 aa10.96□□□□□ -0.65
LIMS2-208ENST00000410011 OTOGQ6ZRI0 2925 aa10.96□□□□□ -0.66
LIMS2-208ENST00000410011 KRTAP10-11P60412 298 aa10.96□□□□□ -0.66
LIMS2-208ENST00000410011 RETNQ9HD89 108 aa10.96□□□□□ -0.66
LIMS2-208ENST00000410011 SYCNQ0VAF6 134 aa10.95□□□□□ -0.66
LIMS2-208ENST00000410011 C20orf197Q8N268 126 aa10.94□□□□□ -0.66
LIMS2-208ENST00000410011 HIVEP1P15822 2718 aa10.94□□□□□ -0.66
LIMS2-208ENST00000410011 TLX1NBP0CAT3 122 aa10.93□□□□□ -0.66
LIMS2-208ENST00000410011 KLKP1Q107X0 134 aa10.93□□□□□ -0.66
LIMS2-208ENST00000410011 OXLD1Q5BKU9 147 aa10.93□□□□□ -0.66
LIMS2-208ENST00000410011 PLA2G2DQ9UNK4 145 aa10.93□□□□□ -0.66
LIMS2-208ENST00000410011 TEP1Q99973 2627 aaKnown RBP10.93□□□□□ -0.66
LIMS2-208ENST00000410011 HECTD1Q9ULT8 2610 aa10.92□□□□□ -0.66
LIMS2-208ENST00000410011 IGKV2D-24A0A075B6R9 120 aa10.92□□□□□ -0.66
LIMS2-208ENST00000410011 TRAV10A0A0B4J240 114 aa10.92□□□□□ -0.66
LIMS2-208ENST00000410011 DNAH10OSP0CZ25 163 aa10.92□□□□□ -0.66
LIMS2-208ENST00000410011 TRRAPQ9Y4A5 3859 aa10.92□□□□□ -0.66
LIMS2-208ENST00000410011 DEFB131BA0A096LNP1 70 aa10.91□□□□□ -0.66
LIMS2-208ENST00000410011 ATRQ13535 2644 aa10.91□□□□□ -0.66
LIMS2-208ENST00000410011 NKAPP1Q8N9T2 125 aa10.89□□□□□ -0.67
LIMS2-208ENST00000410011 A0A1B0GW54 56 aa10.89□□□□□ -0.67
LIMS2-208ENST00000410011 H7BZZ5 65 aa10.89□□□□□ -0.67
LIMS2-208ENST00000410011 C11orf45Q8TAV5 145 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms