RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 FAM208AQ9UK61 1670 aaKnown RBP1.89□□□□□ -2.11
LSM5-205ENST00000409952 BOD1L1Q8NFC6 3051 aa1.89□□□□□ -2.11
LSM5-205ENST00000409952 ITPR2Q14571 2701 aa1.89□□□□□ -2.11
LSM5-205ENST00000409952 UTP20O75691 2785 aaKnown RBP1.88□□□□□ -2.11
LSM5-205ENST00000409952 ABCA4P78363 2273 aa1.88□□□□□ -2.11
LSM5-205ENST00000409952 PDZD2O15018 2839 aa1.88□□□□□ -2.11
LSM5-205ENST00000409952 MED13Q9UHV7 2174 aa1.88□□□□□ -2.11
LSM5-205ENST00000409952 HMGN4O00479 90 aa1.88□□□□□ -2.11
LSM5-205ENST00000409952 COX6CP09669 75 aa1.88□□□□□ -2.11
LSM5-205ENST00000409952 LYNX1P0DP58 116 aa1.88□□□□□ -2.11
LSM5-205ENST00000409952 C6orf52Q5T4I8 152 aa1.88□□□□□ -2.11
LSM5-205ENST00000409952 Q8N6K4 173 aa1.88□□□□□ -2.11
LSM5-205ENST00000409952 SERP2Q8N6R1 65 aa1.88□□□□□ -2.11
LSM5-205ENST00000409952 Q96NJ1 140 aa1.88□□□□□ -2.11
LSM5-205ENST00000409952 PRO1933Q9H354 126 aa1.88□□□□□ -2.11
LSM5-205ENST00000409952 TSC2P49815 1807 aa1.88□□□□□ -2.11
LSM5-205ENST00000409952 SPTBN1Q01082 2364 aaKnown RBP1.88□□□□□ -2.11
LSM5-205ENST00000409952 NIPBLQ6KC79 2804 aaeCLIP1.88□□□□□ -2.11
LSM5-205ENST00000409952 PCLOQ9Y6V0 5065 aa1.88□□□□□ -2.11
LSM5-205ENST00000409952 ZNF831Q5JPB2 1677 aa1.87□□□□□ -2.11
LSM5-205ENST00000409952 PATJQ8NI35 1801 aa1.87□□□□□ -2.11
LSM5-205ENST00000409952 HIVEP3Q5T1R4 2406 aa1.87□□□□□ -2.11
LSM5-205ENST00000409952 FAUP35544 74 aaKnown RBP1.87□□□□□ -2.11
LSM5-205ENST00000409952 TRGV9Q99603 122 aa1.87□□□□□ -2.11
LSM5-205ENST00000409952 V9GYH0 126 aa1.87□□□□□ -2.11
LSM5-205ENST00000409952 DMXL2Q8TDJ6 3036 aa1.87□□□□□ -2.11
LSM5-205ENST00000409952 CELSR2Q9HCU4 2923 aa1.87□□□□□ -2.11
LSM5-205ENST00000409952 AFDNP55196 1824 aaKnown RBP1.87□□□□□ -2.11
LSM5-205ENST00000409952 VWFP04275 2813 aa1.86□□□□□ -2.11
LSM5-205ENST00000409952 DDX60Q8IY21 1712 aaKnown RBP1.86□□□□□ -2.11
LSM5-205ENST00000409952 HIVEP2P31629 2446 aa1.86□□□□□ -2.11
LSM5-205ENST00000409952 SNRNP200O75643 2136 aaKnown RBP1.86□□□□□ -2.11
LSM5-205ENST00000409952 PYY3Q5JQD4 70 aa1.86□□□□□ -2.11
LSM5-205ENST00000409952 TMEM170BQ5T4T1 132 aa1.86□□□□□ -2.11
LSM5-205ENST00000409952 BAGE3Q86Y29 109 aa1.86□□□□□ -2.11
LSM5-205ENST00000409952 DMDP11532 3685 aa1.86□□□□□ -2.11
LSM5-205ENST00000409952 NBASA2RRP1 2371 aa1.86□□□□□ -2.11
LSM5-205ENST00000409952 COL6A6A6NMZ7 2263 aa1.86□□□□□ -2.11
LSM5-205ENST00000409952 MED13LQ71F56 2210 aa1.85□□□□□ -2.11
LSM5-205ENST00000409952 APOC3P02656 99 aa1.85□□□□□ -2.11
LSM5-205ENST00000409952 TRAPPC2P0DI81 140 aa1.85□□□□□ -2.11
LSM5-205ENST00000409952 TRAPPC2BP0DI82 140 aa1.85□□□□□ -2.11
LSM5-205ENST00000409952 KRTAP12-4P60329 112 aa1.85□□□□□ -2.11
LSM5-205ENST00000409952 SPINK13Q1W4C9 94 aa1.85□□□□□ -2.11
LSM5-205ENST00000409952 CACFD1Q9UGQ2 172 aa1.85□□□□□ -2.11
LSM5-205ENST00000409952 TGP01266 2768 aa1.85□□□□□ -2.11
LSM5-205ENST00000409952 CHD9Q3L8U1 2897 aa1.84□□□□□ -2.11
LSM5-205ENST00000409952 MAP2P11137 1827 aaKnown RBP1.84□□□□□ -2.11
LSM5-205ENST00000409952 CELSR1Q9NYQ6 3014 aa1.84□□□□□ -2.11
LSM5-205ENST00000409952 A0A096LNT2 108 aa1.84□□□□□ -2.11
LSM5-205ENST00000409952 TRGV1A0A0A0MS02 117 aa1.84□□□□□ -2.11
LSM5-205ENST00000409952 TMEM14DPA8MWL7 114 aa1.84□□□□□ -2.11
LSM5-205ENST00000409952 M0R135 149 aa1.84□□□□□ -2.11
LSM5-205ENST00000409952 PLAC4Q8WY50 150 aa1.84□□□□□ -2.11
LSM5-205ENST00000409952 AMELXQ99217 191 aa1.84□□□□□ -2.11
LSM5-205ENST00000409952 BPESC1Q9GZL8 116 aa1.84□□□□□ -2.11
LSM5-205ENST00000409952 UBR4Q5T4S7 5183 aa1.84□□□□□ -2.12
LSM5-205ENST00000409952 ACACAQ13085 2346 aa1.84□□□□□ -2.12
LSM5-205ENST00000409952 AKAP13Q12802 2813 aa1.84□□□□□ -2.12
LSM5-205ENST00000409952 DOCK1Q14185 1865 aa1.84□□□□□ -2.12
LSM5-205ENST00000409952 MYH8P13535 1937 aa1.83□□□□□ -2.12
LSM5-205ENST00000409952 ANKARQ7Z5J8 1434 aa1.83□□□□□ -2.12
LSM5-205ENST00000409952 ASXL3Q9C0F0 2248 aa1.83□□□□□ -2.12
LSM5-205ENST00000409952 CACNA1EQ15878 2313 aa1.83□□□□□ -2.12
LSM5-205ENST00000409952 OTOGQ6ZRI0 2925 aa1.83□□□□□ -2.12
LSM5-205ENST00000409952 IGLC7A0M8Q6 106 aa1.83□□□□□ -2.12
LSM5-205ENST00000409952 F8VRH5 84 aa1.83□□□□□ -2.12
LSM5-205ENST00000409952 ANGP03950 147 aaKnown RBP1.83□□□□□ -2.12
LSM5-205ENST00000409952 SFTA2Q6UW10 78 aa1.83□□□□□ -2.12
LSM5-205ENST00000409952 LCN9Q8WX39 176 aa1.83□□□□□ -2.12
LSM5-205ENST00000409952 CEP162Q5TB80 1403 aa1.83□□□□□ -2.12
LSM5-205ENST00000409952 ESPL1Q14674 2120 aa1.82□□□□□ -2.12
LSM5-205ENST00000409952 MED12Q93074 2177 aa1.82□□□□□ -2.12
LSM5-205ENST00000409952 HMCN1Q96RW7 5635 aa1.82□□□□□ -2.12
LSM5-205ENST00000409952 AHCTF1Q8WYP5 2266 aa1.82□□□□□ -2.12
LSM5-205ENST00000409952 DUOX1Q9NRD9 1551 aa1.82□□□□□ -2.12
LSM5-205ENST00000409952 A0A0G2JND7 137 aa1.82□□□□□ -2.12
LSM5-205ENST00000409952 SYS1-DBNDD2H3BUS1 97 aa1.82□□□□□ -2.12
LSM5-205ENST00000409952 K7EP34 96 aa1.82□□□□□ -2.12
LSM5-205ENST00000409952 ACYP2P14621 99 aa1.82□□□□□ -2.12
LSM5-205ENST00000409952 Q6ZSA8 131 aa1.82□□□□□ -2.12
LSM5-205ENST00000409952 VMO1Q7Z5L0 202 aa1.82□□□□□ -2.12
LSM5-205ENST00000409952 ADGRG4Q8IZF6 3080 aa1.82□□□□□ -2.12
LSM5-205ENST00000409952 DLG5Q8TDM6 1919 aa1.81□□□□□ -2.12
LSM5-205ENST00000409952 CTXND1A0A1B0GTU2 59 aa1.81□□□□□ -2.12
LSM5-205ENST00000409952 H7BZZ5 65 aa1.81□□□□□ -2.12
LSM5-205ENST00000409952 C20orf78Q9BR46 151 aa1.81□□□□□ -2.12
LSM5-205ENST00000409952 NXT2Q9NPJ8 142 aaKnown RBP1.81□□□□□ -2.12
LSM5-205ENST00000409952 CSPG4Q6UVK1 2322 aa1.81□□□□□ -2.12
LSM5-205ENST00000409952 HIVEP1P15822 2718 aa1.81□□□□□ -2.12
LSM5-205ENST00000409952 WDFY3Q8IZQ1 3526 aa1.8□□□□□ -2.12
LSM5-205ENST00000409952 PARP14Q460N5 1801 aa1.8□□□□□ -2.12
LSM5-205ENST00000409952 UQCRHLA0A096LP55 91 aa1.8□□□□□ -2.12
LSM5-205ENST00000409952 TRAV1-2A0A0B4J238 106 aa1.8□□□□□ -2.12
LSM5-205ENST00000409952 UQCR11O14957 56 aa1.8□□□□□ -2.12
LSM5-205ENST00000409952 LY6G6CO95867 125 aa1.8□□□□□ -2.12
LSM5-205ENST00000409952 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.8□□□□□ -2.12
LSM5-205ENST00000409952 BAGE2Q86Y30 109 aa1.8□□□□□ -2.12
LSM5-205ENST00000409952 LINC01558Q9Y6Z2 57 aa1.8□□□□□ -2.12
LSM5-205ENST00000409952 ARL2-SNX15V9GYD0 113 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms