RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 KRTAP1-1Q07627 177 aa11.51□□□□□ -0.57
PCDHA13-202ENST00000409494 LINC00588Q9Y4M8 146 aa11.51□□□□□ -0.57
PCDHA13-202ENST00000409494 BRK1Q8WUW1 75 aa11.5□□□□□ -0.57
PCDHA13-202ENST00000409494 LIMD2Q9BT23 127 aa11.5□□□□□ -0.57
PCDHA13-202ENST00000409494 GVQW2A0A096LPI5 108 aaPredicted RBP11.49□□□□□ -0.57
PCDHA13-202ENST00000409494 LINC00846Q9NV44 126 aa11.49□□□□□ -0.57
PCDHA13-202ENST00000409494 TRAV7A0A075B6U4 112 aa11.49□□□□□ -0.57
PCDHA13-202ENST00000409494 A0A1B0GW54 56 aa11.48□□□□□ -0.57
PCDHA13-202ENST00000409494 K7EIL1 84 aa11.48□□□□□ -0.57
PCDHA13-202ENST00000409494 C6orf48Q9UBA6 75 aa11.48□□□□□ -0.57
PCDHA13-202ENST00000409494 LINC00612Q8N6U2 182 aa11.47□□□□□ -0.57
PCDHA13-202ENST00000409494 MPLKIPQ8TAP9 179 aa11.47□□□□□ -0.57
PCDHA13-202ENST00000409494 A0A0C4DFX4 3053 aa11.46□□□□□ -0.57
PCDHA13-202ENST00000409494 SOSTDC1Q6X4U4 206 aa11.46□□□□□ -0.58
PCDHA13-202ENST00000409494 HRCT1Q6UXD1 115 aa11.46□□□□□ -0.58
PCDHA13-202ENST00000409494 CIRBP-AS1Q8TBR5 109 aa11.45□□□□□ -0.58
PCDHA13-202ENST00000409494 SMCR5Q8TEV8 140 aa11.45□□□□□ -0.58
PCDHA13-202ENST00000409494 C16orf90A8MZG2 172 aa11.43□□□□□ -0.58
PCDHA13-202ENST00000409494 WFDC13Q8IUB5 93 aa11.43□□□□□ -0.58
PCDHA13-202ENST00000409494 LINC00167Q96N53 147 aa11.43□□□□□ -0.58
PCDHA13-202ENST00000409494 HELZ2Q9BYK8 2649 aaKnown RBP11.42□□□□□ -0.58
PCDHA13-202ENST00000409494 RANBP2P49792 3224 aaKnown RBP11.42□□□□□ -0.58
PCDHA13-202ENST00000409494 LITAFQ99732 161 aa11.41□□□□□ -0.58
PCDHA13-202ENST00000409494 KRTAP10-11P60412 298 aa11.41□□□□□ -0.58
PCDHA13-202ENST00000409494 TM2D3Q9BRN9 247 aa11.41□□□□□ -0.58
PCDHA13-202ENST00000409494 KRTAP10-3P60369 221 aa11.4□□□□□ -0.58
PCDHA13-202ENST00000409494 Q8N3U1 123 aa11.4□□□□□ -0.58
PCDHA13-202ENST00000409494 FAM218AQ96MZ4 157 aa11.4□□□□□ -0.58
PCDHA13-202ENST00000409494 RTL8CO15255 209 aa11.38□□□□□ -0.59
PCDHA13-202ENST00000409494 Q6ZVQ6 151 aa11.38□□□□□ -0.59
PCDHA13-202ENST00000409494 TRANK1O15050 2925 aa11.38□□□□□ -0.59
PCDHA13-202ENST00000409494 Q6ZRP5 223 aa11.37□□□□□ -0.59
PCDHA13-202ENST00000409494 Q8N9L7 120 aa11.37□□□□□ -0.59
PCDHA13-202ENST00000409494 FAM229AH3BQW9 127 aa11.37□□□□□ -0.59
PCDHA13-202ENST00000409494 PRLHP81277 87 aa11.37□□□□□ -0.59
PCDHA13-202ENST00000409494 GIG44P09565 113 aaPredicted RBP11.36□□□□□ -0.59
PCDHA13-202ENST00000409494 SMIM26A0A096LP01 95 aa11.36□□□□□ -0.59
PCDHA13-202ENST00000409494 A0A087WSZ3 146 aa11.36□□□□□ -0.59
PCDHA13-202ENST00000409494 SPTSSBQ8NFR3 76 aa11.35□□□□□ -0.59
PCDHA13-202ENST00000409494 PRR34Q9NV39 138 aa11.35□□□□□ -0.59
PCDHA13-202ENST00000409494 SERP1Q9Y6X1 66 aa11.35□□□□□ -0.59
PCDHA13-202ENST00000409494 FAM30AQ9NZY2 134 aa11.34□□□□□ -0.59
PCDHA13-202ENST00000409494 V9GYY9 64 aa11.34□□□□□ -0.59
PCDHA13-202ENST00000409494 ELOF1P60002 83 aaKnown RBP11.34□□□□□ -0.59
PCDHA13-202ENST00000409494 LINC01547P58512 204 aaPredicted RBP11.34□□□□□ -0.59
PCDHA13-202ENST00000409494 WIPF1O43516 503 aa11.31□□□□□ -0.6
PCDHA13-202ENST00000409494 Q6ZRX8 168 aa11.31□□□□□ -0.6
PCDHA13-202ENST00000409494 PRR15LQ9BU68 103 aa11.3□□□□□ -0.6
PCDHA13-202ENST00000409494 PRR4Q16378 134 aa11.3□□□□□ -0.6
PCDHA13-202ENST00000409494 CXCL6P80162 114 aa11.29□□□□□ -0.6
PCDHA13-202ENST00000409494 MKI67P46013 3256 aaKnown RBP11.28□□□□□ -0.6
PCDHA13-202ENST00000409494 CRYGAP11844 174 aa11.28□□□□□ -0.6
PCDHA13-202ENST00000409494 FLNAP21333 2647 aaKnown RBP11.28□□□□□ -0.6
PCDHA13-202ENST00000409494 KIAA0087Q14695 138 aa11.28□□□□□ -0.6
PCDHA13-202ENST00000409494 IGHV6-1A0A0B4J1U7 121 aa11.27□□□□□ -0.61
PCDHA13-202ENST00000409494 BCE1O60756 84 aa11.27□□□□□ -0.61
PCDHA13-202ENST00000409494 A0A0U1RQV1 116 aa11.26□□□□□ -0.61
PCDHA13-202ENST00000409494 Q8NBF4 154 aa11.25□□□□□ -0.61
PCDHA13-202ENST00000409494 ITPR3Q14573 2671 aa11.25□□□□□ -0.61
PCDHA13-202ENST00000409494 TMEM254Q8TBM7 123 aa11.24□□□□□ -0.61
PCDHA13-202ENST00000409494 K7ERS5 55 aa11.24□□□□□ -0.61
PCDHA13-202ENST00000409494 PLA2G1BP04054 148 aaKnown RBP11.24□□□□□ -0.61
PCDHA13-202ENST00000409494 LAMA3Q16787 3333 aa11.23□□□□□ -0.61
PCDHA13-202ENST00000409494 ZNF292O60281 2723 aa11.23□□□□□ -0.61
PCDHA13-202ENST00000409494 VPREB1P12018 145 aa11.23□□□□□ -0.61
PCDHA13-202ENST00000409494 EIF4EBP3O60516 100 aaPredicted RBP11.23□□□□□ -0.61
PCDHA13-202ENST00000409494 LAMA2P24043 3122 aaKnown RBP11.22□□□□□ -0.61
PCDHA13-202ENST00000409494 LINC00336Q6ZUF6 198 aa11.22□□□□□ -0.61
PCDHA13-202ENST00000409494 PHF5AQ7RTV0 110 aaKnown RBP11.22□□□□□ -0.61
PCDHA13-202ENST00000409494 MGAM2Q2M2H8 2515 aa11.21□□□□□ -0.62
PCDHA13-202ENST00000409494 IGLV6-57P01721 117 aa11.21□□□□□ -0.62
PCDHA13-202ENST00000409494 TLX1NBP0CAT3 122 aa11.2□□□□□ -0.62
PCDHA13-202ENST00000409494 ZNF575Q86XF7 245 aa11.2□□□□□ -0.62
PCDHA13-202ENST00000409494 LINC00208Q96KT6 92 aa11.2□□□□□ -0.62
PCDHA13-202ENST00000409494 HCG22E2RYF7 251 aa11.2□□□□□ -0.62
PCDHA13-202ENST00000409494 EPM2AB3EWF7 344 aa11.19□□□□□ -0.62
PCDHA13-202ENST00000409494 LOC110117498A0A087WWA1 95 aa11.18□□□□□ -0.62
PCDHA13-202ENST00000409494 Q6ZQT0 140 aa11.18□□□□□ -0.62
PCDHA13-202ENST00000409494 PLA2G2DQ9UNK4 145 aa11.18□□□□□ -0.62
PCDHA13-202ENST00000409494 MOBPQ13875 183 aa11.18□□□□□ -0.62
PCDHA13-202ENST00000409494 TP53AIP1Q9HCN2 124 aa11.18□□□□□ -0.62
PCDHA13-202ENST00000409494 CFAP46Q8IYW2 2715 aa11.18□□□□□ -0.62
PCDHA13-202ENST00000409494 KCNQ1DNQ9H478 68 aa11.18□□□□□ -0.62
PCDHA13-202ENST00000409494 BRCA2P51587 3418 aa11.17□□□□□ -0.62
PCDHA13-202ENST00000409494 C9orf163Q8N9P6 203 aa11.17□□□□□ -0.62
PCDHA13-202ENST00000409494 APLNQ9ULZ1 77 aa11.16□□□□□ -0.62
PCDHA13-202ENST00000409494 CFAP54Q96N23 3096 aa11.15□□□□□ -0.62
PCDHA13-202ENST00000409494 IGLV1-50A0A075B6I6 118 aa11.13□□□□□ -0.63
PCDHA13-202ENST00000409494 A0A087WTM6 91 aa11.13□□□□□ -0.63
PCDHA13-202ENST00000409494 TYMSOSQ8TAI1 123 aa11.13□□□□□ -0.63
PCDHA13-202ENST00000409494 RPS28P62857 69 aaKnown RBP11.13□□□□□ -0.63
PCDHA13-202ENST00000409494 C15orf56Q8N910 161 aa11.12□□□□□ -0.63
PCDHA13-202ENST00000409494 USP24Q9UPU5 2620 aa11.12□□□□□ -0.63
PCDHA13-202ENST00000409494 ATRQ13535 2644 aa11.12□□□□□ -0.63
PCDHA13-202ENST00000409494 LINC00476Q8WZB0 136 aa11.12□□□□□ -0.63
PCDHA13-202ENST00000409494 hDV103S1A0JD37 113 aa11.11□□□□□ -0.63
PCDHA13-202ENST00000409494 RPL37AP61513 92 aaKnown RBP11.1□□□□□ -0.63
PCDHA13-202ENST00000409494 TRBV7-4A0A0J9YYF1 115 aa11.1□□□□□ -0.63
PCDHA13-202ENST00000409494 A6NED7 52 aa11.1□□□□□ -0.63
PCDHA13-202ENST00000409494 CNBPP62633 177 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms