RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 IGKV3-20P01619 116 aa3.41□□□□□ -1.86
CNGA1-202ENST00000402813 SDK1Q7Z5N4 2213 aa3.41□□□□□ -1.86
CNGA1-202ENST00000402813 LOC110117498A0A087WWA1 95 aa3.41□□□□□ -1.86
CNGA1-202ENST00000402813 SPRR4Q96PI1 79 aa3.41□□□□□ -1.86
CNGA1-202ENST00000402813 PRR9Q5T870 116 aa3.4□□□□□ -1.86
CNGA1-202ENST00000402813 LINC00308Q8TCZ7 52 aa3.4□□□□□ -1.86
CNGA1-202ENST00000402813 LINC00208Q96KT6 92 aa3.4□□□□□ -1.86
CNGA1-202ENST00000402813 CHD6Q8TD26 2715 aa3.4□□□□□ -1.87
CNGA1-202ENST00000402813 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.87
CNGA1-202ENST00000402813 IGKV3OR2-268A0A0C4DH90 116 aa3.4□□□□□ -1.87
CNGA1-202ENST00000402813 SPTBN4Q9H254 2564 aa3.39□□□□□ -1.87
CNGA1-202ENST00000402813 ARHGAP32A7KAX9 2087 aa3.39□□□□□ -1.87
CNGA1-202ENST00000402813 RANBP2P49792 3224 aaKnown RBP3.39□□□□□ -1.87
CNGA1-202ENST00000402813 RPL39LQ96EH5 51 aaKnown RBP3.39□□□□□ -1.87
CNGA1-202ENST00000402813 RHPN1-AS1Q9BWJ2 59 aa3.39□□□□□ -1.87
CNGA1-202ENST00000402813 PRO2289Q9P1D8 64 aa3.39□□□□□ -1.87
CNGA1-202ENST00000402813 ANKRD11Q6UB99 2663 aaPredicted RBP3.39□□□□□ -1.87
CNGA1-202ENST00000402813 SPINK7P58062 85 aa3.39□□□□□ -1.87
CNGA1-202ENST00000402813 UBL5Q9BZL1 73 aa3.39□□□□□ -1.87
CNGA1-202ENST00000402813 PSORS1C2Q9UIG4 136 aa3.39□□□□□ -1.87
CNGA1-202ENST00000402813 MGPP08493 103 aa3.38□□□□□ -1.87
CNGA1-202ENST00000402813 LCE1DQ5T752 114 aa3.38□□□□□ -1.87
CNGA1-202ENST00000402813 SPATA8Q6RVD6 105 aa3.38□□□□□ -1.87
CNGA1-202ENST00000402813 TNCP24821 2201 aa3.38□□□□□ -1.87
CNGA1-202ENST00000402813 SETXQ7Z333 2677 aaKnown RBP3.38□□□□□ -1.87
CNGA1-202ENST00000402813 PTPRZ1P23471 2315 aaPredicted RBP3.38□□□□□ -1.87
CNGA1-202ENST00000402813 BRWD1Q9NSI6 2320 aa3.38□□□□□ -1.87
CNGA1-202ENST00000402813 TRBV6-4A0A1B0GX49 114 aa3.38□□□□□ -1.87
CNGA1-202ENST00000402813 UQCR11O14957 56 aa3.38□□□□□ -1.87
CNGA1-202ENST00000402813 GAS8-AS1O95177 125 aa3.38□□□□□ -1.87
CNGA1-202ENST00000402813 FASNP49327 2511 aaKnown RBP3.38□□□□□ -1.87
CNGA1-202ENST00000402813 INTS1Q8N201 2190 aaKnown RBP3.38□□□□□ -1.87
CNGA1-202ENST00000402813 ACACBO00763 2458 aa3.37□□□□□ -1.87
CNGA1-202ENST00000402813 MAST4O15021 2626 aa3.37□□□□□ -1.87
CNGA1-202ENST00000402813 H0Y9P7 68 aa3.37□□□□□ -1.87
CNGA1-202ENST00000402813 C4orf3Q8WVX3 66 aa3.37□□□□□ -1.87
CNGA1-202ENST00000402813 MKI67P46013 3256 aaKnown RBP3.37□□□□□ -1.87
CNGA1-202ENST00000402813 ZFHX2Q9C0A1 2572 aaPredicted RBP3.37□□□□□ -1.87
CNGA1-202ENST00000402813 GVQW2A0A096LPI5 108 aaPredicted RBP3.36□□□□□ -1.87
CNGA1-202ENST00000402813 LINC00612Q8N6U2 182 aa3.36□□□□□ -1.87
CNGA1-202ENST00000402813 H3BUX3 64 aa3.36□□□□□ -1.87
CNGA1-202ENST00000402813 ZNF861PO60384 105 aa3.36□□□□□ -1.87
CNGA1-202ENST00000402813 Q8IZM0 81 aa3.36□□□□□ -1.87
CNGA1-202ENST00000402813 TPRP12270 2363 aaKnown RBP3.35□□□□□ -1.87
CNGA1-202ENST00000402813 HIGD2AQ9BW72 106 aa3.35□□□□□ -1.87
CNGA1-202ENST00000402813 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
CNGA1-202ENST00000402813 ZNF292O60281 2723 aa3.35□□□□□ -1.87
CNGA1-202ENST00000402813 ASH1LQ9NR48 2969 aaKnown RBP3.35□□□□□ -1.87
CNGA1-202ENST00000402813 LAMA2P24043 3122 aaKnown RBP3.35□□□□□ -1.87
CNGA1-202ENST00000402813 Q8N3U1 123 aa3.35□□□□□ -1.87
CNGA1-202ENST00000402813 KRTAP4-9Q9BYQ8 210 aa3.35□□□□□ -1.87
CNGA1-202ENST00000402813 TIMM8BQ9Y5J9 83 aaPredicted RBP3.35□□□□□ -1.87
CNGA1-202ENST00000402813 TECTAO75443 2155 aa3.35□□□□□ -1.87
CNGA1-202ENST00000402813 FLNBO75369 2602 aaKnown RBP3.35□□□□□ -1.87
CNGA1-202ENST00000402813 FAM186AA6NE01 2351 aa3.34□□□□□ -1.87
CNGA1-202ENST00000402813 A0A087WTM6 91 aa3.34□□□□□ -1.87
CNGA1-202ENST00000402813 DEFB124Q8NES8 71 aa3.34□□□□□ -1.87
CNGA1-202ENST00000402813 ARFGEF3Q5TH69 2177 aa3.34□□□□□ -1.87
CNGA1-202ENST00000402813 CACNA1DQ01668 2161 aa3.34□□□□□ -1.88
CNGA1-202ENST00000402813 HTTP42858 3142 aa3.33□□□□□ -1.88
CNGA1-202ENST00000402813 DNAJC13O75165 2243 aa3.33□□□□□ -1.88
CNGA1-202ENST00000402813 NAV3Q8IVL0 2385 aa3.33□□□□□ -1.88
CNGA1-202ENST00000402813 RPL39P62891 51 aaKnown RBP3.33□□□□□ -1.88
CNGA1-202ENST00000402813 R4GN34 69 aa3.33□□□□□ -1.88
CNGA1-202ENST00000402813 ZNF462Q96JM2 2506 aa3.33□□□□□ -1.88
CNGA1-202ENST00000402813 CHD9Q3L8U1 2897 aa3.33□□□□□ -1.88
CNGA1-202ENST00000402813 VCANP13611 3396 aa3.33□□□□□ -1.88
CNGA1-202ENST00000402813 RTTNQ86VV8 2226 aa3.33□□□□□ -1.88
CNGA1-202ENST00000402813 Q6ZTI0 123 aa3.33□□□□□ -1.88
CNGA1-202ENST00000402813 WFDC9Q8NEX5 89 aa3.32□□□□□ -1.88
CNGA1-202ENST00000402813 NCOR2Q9Y618 2525 aa3.31□□□□□ -1.88
CNGA1-202ENST00000402813 WFDC10AQ9H1F0 79 aa3.31□□□□□ -1.88
CNGA1-202ENST00000402813 USP24Q9UPU5 2620 aa3.31□□□□□ -1.88
CNGA1-202ENST00000402813 G3V318 75 aa3.31□□□□□ -1.88
CNGA1-202ENST00000402813 MAP1BP46821 2468 aaKnown RBP3.31□□□□□ -1.88
CNGA1-202ENST00000402813 NAV2Q8IVL1 2488 aa3.31□□□□□ -1.88
CNGA1-202ENST00000402813 CDKN2A-AS1Q9UH64 79 aa3.3□□□□□ -1.88
CNGA1-202ENST00000402813 A0A0J9YWU9 116 aa3.3□□□□□ -1.88
CNGA1-202ENST00000402813 H3BNG1 76 aa3.3□□□□□ -1.88
CNGA1-202ENST00000402813 MUC3AQ02505 3323 aa3.3□□□□□ -1.88
CNGA1-202ENST00000402813 RIF1Q5UIP0 2472 aaKnown RBP3.3□□□□□ -1.88
CNGA1-202ENST00000402813 EYSQ5T1H1 3165 aa3.3□□□□□ -1.88
CNGA1-202ENST00000402813 PRUNE2Q8WUY3 3088 aa3.3□□□□□ -1.88
CNGA1-202ENST00000402813 J3QKU1 62 aa3.3□□□□□ -1.88
CNGA1-202ENST00000402813 LAMA3Q16787 3333 aa3.29□□□□□ -1.88
CNGA1-202ENST00000402813 NBDYA0A0U1RRE5 68 aa3.29□□□□□ -1.88
CNGA1-202ENST00000402813 LINC00959A0A1B0GUT2 108 aa3.29□□□□□ -1.88
CNGA1-202ENST00000402813 KRTAP5-3Q6L8H2 238 aa3.29□□□□□ -1.88
CNGA1-202ENST00000402813 KRTAP19-1Q8IUB9 90 aa3.29□□□□□ -1.88
CNGA1-202ENST00000402813 APELAP0DMC3 54 aa3.29□□□□□ -1.88
CNGA1-202ENST00000402813 LINC00472Q9H8W2 130 aa3.29□□□□□ -1.88
CNGA1-202ENST00000402813 GCN1Q92616 2671 aaKnown RBP3.28□□□□□ -1.88
CNGA1-202ENST00000402813 A0A096LNT2 108 aa3.28□□□□□ -1.88
CNGA1-202ENST00000402813 SPINT4Q6UDR6 99 aa3.28□□□□□ -1.88
CNGA1-202ENST00000402813 USP9XQ93008 2570 aaPredicted RBP3.28□□□□□ -1.88
CNGA1-202ENST00000402813 GVINP1Q7Z2Y8 2422 aa3.28□□□□□ -1.88
CNGA1-202ENST00000402813 CACNA1HO95180 2353 aa3.28□□□□□ -1.88
CNGA1-202ENST00000402813 IGKV2-28A0A075B6P5 120 aa3.28□□□□□ -1.88
CNGA1-202ENST00000402813 IGKV2D-28P01615 120 aa3.28□□□□□ -1.88
CNGA1-202ENST00000402813 TRGV4A0A0C4DH28 118 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms