RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 LRBAP50851 2863 aa10.25□□□□□ -0.77
RPRD1A-202ENST00000399022 NDUFS5O43920 106 aa10.25□□□□□ -0.77
RPRD1A-202ENST00000399022 COX17Q14061 63 aa10.25□□□□□ -0.77
RPRD1A-202ENST00000399022 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.25□□□□□ -0.77
RPRD1A-202ENST00000399022 NANOS2P60321 138 aaKnown RBP10.24□□□□□ -0.77
RPRD1A-202ENST00000399022 PSPHP1O15172 72 aa10.24□□□□□ -0.77
RPRD1A-202ENST00000399022 Q8N9L7 120 aa10.24□□□□□ -0.77
RPRD1A-202ENST00000399022 IGKV2-28A0A075B6P5 120 aa10.23□□□□□ -0.77
RPRD1A-202ENST00000399022 CYSRT1A8MQ03 144 aa10.23□□□□□ -0.77
RPRD1A-202ENST00000399022 IGKV2D-28P01615 120 aa10.23□□□□□ -0.77
RPRD1A-202ENST00000399022 LINC00575Q6W349 94 aa10.23□□□□□ -0.77
RPRD1A-202ENST00000399022 IGHV3OR16-9A0A0B4J2B5 98 aa10.22□□□□□ -0.77
RPRD1A-202ENST00000399022 COL12A1Q99715 3063 aa10.22□□□□□ -0.77
RPRD1A-202ENST00000399022 MUC7Q8TAX7 377 aa10.22□□□□□ -0.77
RPRD1A-202ENST00000399022 SEC61GP60059 68 aa10.21□□□□□ -0.77
RPRD1A-202ENST00000399022 PMAIP1Q13794 54 aa10.21□□□□□ -0.77
RPRD1A-202ENST00000399022 OXLD1Q5BKU9 147 aa10.21□□□□□ -0.77
RPRD1A-202ENST00000399022 ESRGQ1W209 222 aa10.21□□□□□ -0.78
RPRD1A-202ENST00000399022 WFDC10BQ8IUB3 73 aa10.21□□□□□ -0.78
RPRD1A-202ENST00000399022 WFDC13Q8IUB5 93 aa10.21□□□□□ -0.78
RPRD1A-202ENST00000399022 TRAV10A0A0B4J240 114 aa10.2□□□□□ -0.78
RPRD1A-202ENST00000399022 ATRQ13535 2644 aa10.2□□□□□ -0.78
RPRD1A-202ENST00000399022 CHKB-CPT1BH3BT56 60 aa10.2□□□□□ -0.78
RPRD1A-202ENST00000399022 FLNCQ14315 2725 aa10.19□□□□□ -0.78
RPRD1A-202ENST00000399022 LINC00336Q6ZUF6 198 aa10.19□□□□□ -0.78
RPRD1A-202ENST00000399022 C11orf45Q8TAV5 145 aa10.18□□□□□ -0.78
RPRD1A-202ENST00000399022 CHD6Q8TD26 2715 aa10.18□□□□□ -0.78
RPRD1A-202ENST00000399022 WDFY3Q8IZQ1 3526 aa10.17□□□□□ -0.78
RPRD1A-202ENST00000399022 DEFB131BA0A096LNP1 70 aa10.17□□□□□ -0.78
RPRD1A-202ENST00000399022 A6NED7 52 aa10.17□□□□□ -0.78
RPRD1A-202ENST00000399022 HELZ2Q9BYK8 2649 aaKnown RBP10.17□□□□□ -0.78
RPRD1A-202ENST00000399022 IGHV4-30-4P0DP06 118 aa10.17□□□□□ -0.78
RPRD1A-202ENST00000399022 M0R378 163 aa10.16□□□□□ -0.78
RPRD1A-202ENST00000399022 TM2D3Q9BRN9 247 aa10.16□□□□□ -0.78
RPRD1A-202ENST00000399022 CXCL6P80162 114 aa10.16□□□□□ -0.78
RPRD1A-202ENST00000399022 C6orf223Q8N319 242 aa10.16□□□□□ -0.78
RPRD1A-202ENST00000399022 C2orf48Q96LS8 159 aa10.16□□□□□ -0.78
RPRD1A-202ENST00000399022 H0Y9J4 135 aa10.15□□□□□ -0.78
RPRD1A-202ENST00000399022 NDUFB1O75438 58 aa10.15□□□□□ -0.78
RPRD1A-202ENST00000399022 C9orf129Q5T035 196 aaKnown RBP10.15□□□□□ -0.78
RPRD1A-202ENST00000399022 KPRPQ5T749 579 aaPredicted RBP10.15□□□□□ -0.79
RPRD1A-202ENST00000399022 SPATA3Q8NHX4 192 aa10.14□□□□□ -0.79
RPRD1A-202ENST00000399022 IGSF10Q6WRI0 2623 aa10.14□□□□□ -0.79
RPRD1A-202ENST00000399022 RETNQ9HD89 108 aa10.14□□□□□ -0.79
RPRD1A-202ENST00000399022 HIGD2AQ9BW72 106 aa10.14□□□□□ -0.79
RPRD1A-202ENST00000399022 C16orf95Q9H693 158 aa10.14□□□□□ -0.79
RPRD1A-202ENST00000399022 LINC00474Q9P2X8 69 aa10.14□□□□□ -0.79
RPRD1A-202ENST00000399022 BCE1O60756 84 aa10.13□□□□□ -0.79
RPRD1A-202ENST00000399022 FSHBP01225 129 aa10.13□□□□□ -0.79
RPRD1A-202ENST00000399022 A0A0J9YWU9 116 aa10.13□□□□□ -0.79
RPRD1A-202ENST00000399022 A0A096LNI7 61 aa10.12□□□□□ -0.79
RPRD1A-202ENST00000399022 Q6ZQT0 140 aa10.12□□□□□ -0.79
RPRD1A-202ENST00000399022 MGAM2Q2M2H8 2515 aa10.12□□□□□ -0.79
RPRD1A-202ENST00000399022 LELP1Q5T871 98 aa10.12□□□□□ -0.79
RPRD1A-202ENST00000399022 MUC3AQ02505 3323 aa10.12□□□□□ -0.79
RPRD1A-202ENST00000399022 LINC01600Q96MT4 127 aa10.11□□□□□ -0.79
RPRD1A-202ENST00000399022 LINC00208Q96KT6 92 aa10.1□□□□□ -0.79
RPRD1A-202ENST00000399022 IGKV2-24A0A0C4DH68 120 aa10.09□□□□□ -0.79
RPRD1A-202ENST00000399022 SYCNQ0VAF6 134 aa10.09□□□□□ -0.79
RPRD1A-202ENST00000399022 A0A096LNT2 108 aa10.09□□□□□ -0.79
RPRD1A-202ENST00000399022 RPL37AP8A6NKH3 93 aa10.09□□□□□ -0.79
RPRD1A-202ENST00000399022 A0A1B0GUV1 79 aa10.08□□□□□ -0.8
RPRD1A-202ENST00000399022 H7BZZ5 65 aa10.07□□□□□ -0.8
RPRD1A-202ENST00000399022 C1orf137Q5JT78 98 aa10.07□□□□□ -0.8
RPRD1A-202ENST00000399022 PRR15LQ9BU68 103 aa10.07□□□□□ -0.8
RPRD1A-202ENST00000399022 TEX15Q9BXT5 2789 aa10.05□□□□□ -0.8
RPRD1A-202ENST00000399022 IGKV4-1P06312 121 aa10.04□□□□□ -0.8
RPRD1A-202ENST00000399022 SMIM29Q86T20 159 aa10.04□□□□□ -0.8
RPRD1A-202ENST00000399022 CYSTM1Q9H1C7 97 aa10.04□□□□□ -0.8
RPRD1A-202ENST00000399022 DHRS4-AS1Q9P1J3 65 aa10.04□□□□□ -0.8
RPRD1A-202ENST00000399022 Q6ZTC4 211 aa10.04□□□□□ -0.8
RPRD1A-202ENST00000399022 UBE2AP49459 152 aa10.03□□□□□ -0.8
RPRD1A-202ENST00000399022 MAST4O15021 2626 aa10.03□□□□□ -0.8
RPRD1A-202ENST00000399022 KLKP1Q107X0 134 aa10.03□□□□□ -0.8
RPRD1A-202ENST00000399022 WIPF1O43516 503 aa10.03□□□□□ -0.8
RPRD1A-202ENST00000399022 ITPR1Q14643 2758 aa10.02□□□□□ -0.8
RPRD1A-202ENST00000399022 LOC110117498A0A087WWA1 95 aa10.02□□□□□ -0.8
RPRD1A-202ENST00000399022 EGFEM1PQ0D2K5 195 aa10.01□□□□□ -0.81
RPRD1A-202ENST00000399022 C10orf25Q5T742 122 aa10.01□□□□□ -0.81
RPRD1A-202ENST00000399022 TEP1Q99973 2627 aaKnown RBP10.01□□□□□ -0.81
RPRD1A-202ENST00000399022 DEFB116Q30KQ4 102 aa10□□□□□ -0.81
RPRD1A-202ENST00000399022 ASPMQ8IZT6 3477 aa10□□□□□ -0.81
RPRD1A-202ENST00000399022 GCN1Q92616 2671 aaKnown RBP9.99□□□□□ -0.81
RPRD1A-202ENST00000399022 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.99□□□□□ -0.81
RPRD1A-202ENST00000399022 X6R8D5 127 aa9.98□□□□□ -0.81
RPRD1A-202ENST00000399022 PLAC8L1A1L4L8 177 aa9.97□□□□□ -0.81
RPRD1A-202ENST00000399022 NBEAL2Q6ZNJ1 2754 aa9.95□□□□□ -0.82
RPRD1A-202ENST00000399022 LYPD5Q6UWN5 251 aa9.95□□□□□ -0.82
RPRD1A-202ENST00000399022 FAM104AQ969W3 186 aa9.94□□□□□ -0.82
RPRD1A-202ENST00000399022 KIAA0087Q14695 138 aa9.93□□□□□ -0.82
RPRD1A-202ENST00000399022 DCHS1Q96JQ0 3298 aa9.93□□□□□ -0.82
RPRD1A-202ENST00000399022 DMDP11532 3685 aa9.93□□□□□ -0.82
RPRD1A-202ENST00000399022 Q5XG85 94 aa9.92□□□□□ -0.82
RPRD1A-202ENST00000399022 Q6ZRU5 148 aa9.92□□□□□ -0.82
RPRD1A-202ENST00000399022 HCG22E2RYF7 251 aa9.92□□□□□ -0.82
RPRD1A-202ENST00000399022 GIG44P09565 113 aaPredicted RBP9.92□□□□□ -0.82
RPRD1A-202ENST00000399022 A0A087WSZ3 146 aa9.91□□□□□ -0.82
RPRD1A-202ENST00000399022 B9D2Q9BPU9 175 aa9.91□□□□□ -0.82
RPRD1A-202ENST00000399022 M0R2N4 97 aa9.9□□□□□ -0.82
RPRD1A-202ENST00000399022 H0Y9P7 68 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms