RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 RPL37AP61513 92 aaKnown RBP0.84□□□□□ -2.27
TRAV40-201ENST00000390467 NREPQ16612 68 aa0.84□□□□□ -2.27
TRAV40-201ENST00000390467 C10orf113Q5VZT2 155 aa0.84□□□□□ -2.27
TRAV40-201ENST00000390467 TMEM263Q8WUH6 116 aaKnown RBP0.84□□□□□ -2.27
TRAV40-201ENST00000390467 SMIM4Q8WVI0 70 aa0.84□□□□□ -2.27
TRAV40-201ENST00000390467 OBSCN-AS1Q96MR7 158 aa0.84□□□□□ -2.27
TRAV40-201ENST00000390467 NHSL1Q5SYE7 1610 aa0.84□□□□□ -2.28
TRAV40-201ENST00000390467 CICQ96RK0 1608 aaPredicted RBP0.84□□□□□ -2.28
TRAV40-201ENST00000390467 COL4A2P08572 1712 aa0.84□□□□□ -2.28
TRAV40-201ENST00000390467 CDC42BPAQ5VT25 1732 aa0.84□□□□□ -2.28
TRAV40-201ENST00000390467 PKD1L3Q7Z443 1732 aa0.84□□□□□ -2.28
TRAV40-201ENST00000390467 URB1O60287 2271 aaKnown RBP0.84□□□□□ -2.28
TRAV40-201ENST00000390467 IQGAP2Q13576 1575 aa0.83□□□□□ -2.28
TRAV40-201ENST00000390467 ERCC6L2Q5T890 1561 aa0.83□□□□□ -2.28
TRAV40-201ENST00000390467 ANKRD36CQ5JPF3 1778 aa0.83□□□□□ -2.28
TRAV40-201ENST00000390467 ADCY10Q96PN6 1610 aa0.83□□□□□ -2.28
TRAV40-201ENST00000390467 PHRF1Q9P1Y6 1649 aaKnown RBP0.83□□□□□ -2.28
TRAV40-201ENST00000390467 TRGV2A0A075B6R0 118 aa0.83□□□□□ -2.28
TRAV40-201ENST00000390467 TRGV1A0A0A0MS02 117 aa0.83□□□□□ -2.28
TRAV40-201ENST00000390467 TRBV6-1A0A0K0K1D8 114 aa0.83□□□□□ -2.28
TRAV40-201ENST00000390467 LINC00959A0A1B0GUT2 108 aa0.83□□□□□ -2.28
TRAV40-201ENST00000390467 K7EMI3 77 aa0.83□□□□□ -2.28
TRAV40-201ENST00000390467 PRH1P02810 166 aa0.83□□□□□ -2.28
TRAV40-201ENST00000390467 ZNF625Q96I27 306 aaPredicted RBP0.83□□□□□ -2.28
TRAV40-201ENST00000390467 FMN2Q9NZ56 1722 aa0.83□□□□□ -2.28
TRAV40-201ENST00000390467 ZDBF2Q9HCK1 2354 aa0.83□□□□□ -2.28
TRAV40-201ENST00000390467 PAPPA2Q9BXP8 1791 aa0.83□□□□□ -2.28
TRAV40-201ENST00000390467 C3P01024 1663 aa0.82□□□□□ -2.28
TRAV40-201ENST00000390467 TECTAO75443 2155 aa0.82□□□□□ -2.28
TRAV40-201ENST00000390467 TRAV1-2A0A0B4J238 106 aa0.82□□□□□ -2.28
TRAV40-201ENST00000390467 FCER1GP30273 86 aa0.82□□□□□ -2.28
TRAV40-201ENST00000390467 COX17Q14061 63 aa0.82□□□□□ -2.28
TRAV40-201ENST00000390467 ENHOQ6UWT2 76 aa0.82□□□□□ -2.28
TRAV40-201ENST00000390467 Q6ZRN7 208 aaPredicted RBP0.82□□□□□ -2.28
TRAV40-201ENST00000390467 ABRACLQ9P1F3 81 aa0.82□□□□□ -2.28
TRAV40-201ENST00000390467 SLIT1O75093 1534 aa0.82□□□□□ -2.28
TRAV40-201ENST00000390467 NFAT5O94916 1531 aa0.82□□□□□ -2.28
TRAV40-201ENST00000390467 SAMD9Q5K651 1589 aa0.82□□□□□ -2.28
TRAV40-201ENST00000390467 EIF2AK4Q9P2K8 1649 aaKnown RBP0.82□□□□□ -2.28
TRAV40-201ENST00000390467 C5P01031 1676 aa0.81□□□□□ -2.28
TRAV40-201ENST00000390467 DOT1LQ8TEK3 1739 aa0.81□□□□□ -2.28
TRAV40-201ENST00000390467 FLG2Q5D862 2391 aaPredicted RBP0.81□□□□□ -2.28
TRAV40-201ENST00000390467 SMIM27A0A1W2PRY6 76 aa0.81□□□□□ -2.28
TRAV40-201ENST00000390467 ARL14EPLP0DKL9 152 aa0.81□□□□□ -2.28
TRAV40-201ENST00000390467 DEFB103AP81534 67 aa0.81□□□□□ -2.28
TRAV40-201ENST00000390467 COA5Q86WW8 74 aa0.81□□□□□ -2.28
TRAV40-201ENST00000390467 WFDC9Q8NEX5 89 aa0.81□□□□□ -2.28
TRAV40-201ENST00000390467 GAFA1Q96PS6 74 aa0.81□□□□□ -2.28
TRAV40-201ENST00000390467 TXNDC17Q9BRA2 123 aa0.81□□□□□ -2.28
TRAV40-201ENST00000390467 UBL5Q9BZL1 73 aa0.81□□□□□ -2.28
TRAV40-201ENST00000390467 NWD1Q149M9 1564 aa0.81□□□□□ -2.28
TRAV40-201ENST00000390467 BPTFQ12830 3046 aa0.81□□□□□ -2.28
TRAV40-201ENST00000390467 LY75O60449 1722 aa0.81□□□□□ -2.28
TRAV40-201ENST00000390467 TRPM2O94759 1503 aa0.8□□□□□ -2.28
TRAV40-201ENST00000390467 IGIPA6NJ69 53 aa0.8□□□□□ -2.28
TRAV40-201ENST00000390467 CAV3P56539 151 aa0.8□□□□□ -2.28
TRAV40-201ENST00000390467 DEFB112Q30KQ8 113 aa0.8□□□□□ -2.28
TRAV40-201ENST00000390467 CCL19Q99731 98 aa0.8□□□□□ -2.28
TRAV40-201ENST00000390467 CNOT1A5YKK6 2376 aaKnown RBP0.8□□□□□ -2.28
TRAV40-201ENST00000390467 NRAPQ86VF7 1730 aa0.8□□□□□ -2.28
TRAV40-201ENST00000390467 NRXN3Q9Y4C0 1643 aa0.79□□□□□ -2.28
TRAV40-201ENST00000390467 A0A096LNT2 108 aa0.79□□□□□ -2.28
TRAV40-201ENST00000390467 A0A1B0GU69 56 aa0.79□□□□□ -2.28
TRAV40-201ENST00000390467 LINC01546A6NGU7 62 aa0.79□□□□□ -2.28
TRAV40-201ENST00000390467 ACYP2P14621 99 aa0.79□□□□□ -2.28
TRAV40-201ENST00000390467 COX6B1P14854 86 aa0.79□□□□□ -2.28
TRAV40-201ENST00000390467 SERF2P84101 59 aa0.79□□□□□ -2.28
TRAV40-201ENST00000390467 C10orf99Q6UWK7 81 aa0.79□□□□□ -2.28
TRAV40-201ENST00000390467 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.79□□□□□ -2.28
TRAV40-201ENST00000390467 NAV3Q8IVL0 2385 aa0.79□□□□□ -2.28
TRAV40-201ENST00000390467 ABCC8Q09428 1581 aa0.79□□□□□ -2.28
TRAV40-201ENST00000390467 GVQW2A0A096LPI5 108 aaPredicted RBP0.78□□□□□ -2.28
TRAV40-201ENST00000390467 G3V318 75 aa0.78□□□□□ -2.28
TRAV40-201ENST00000390467 I3L3M4 83 aa0.78□□□□□ -2.28
TRAV40-201ENST00000390467 M0R1W7 72 aa0.78□□□□□ -2.28
TRAV40-201ENST00000390467 NDUFA4O00483 81 aa0.78□□□□□ -2.28
TRAV40-201ENST00000390467 COX7BP24311 80 aa0.78□□□□□ -2.28
TRAV40-201ENST00000390467 PLNP26678 52 aa0.78□□□□□ -2.28
TRAV40-201ENST00000390467 DEFB114Q30KQ6 69 aa0.78□□□□□ -2.28
TRAV40-201ENST00000390467 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.78□□□□□ -2.28
TRAV40-201ENST00000390467 Q6ZQY7 126 aa0.78□□□□□ -2.28
TRAV40-201ENST00000390467 Q6ZRX8 168 aa0.78□□□□□ -2.28
TRAV40-201ENST00000390467 PLAC4Q8WY50 150 aa0.78□□□□□ -2.28
TRAV40-201ENST00000390467 CACNA1EQ15878 2313 aa0.78□□□□□ -2.28
TRAV40-201ENST00000390467 TULP4Q9NRJ4 1543 aa0.78□□□□□ -2.28
TRAV40-201ENST00000390467 FAM208AQ9UK61 1670 aaKnown RBP0.78□□□□□ -2.29
TRAV40-201ENST00000390467 LRRC37A2A6NM11 1700 aa0.78□□□□□ -2.29
TRAV40-201ENST00000390467 COL6A6A6NMZ7 2263 aa0.77□□□□□ -2.29
TRAV40-201ENST00000390467 DOPEY2Q9Y3R5 2298 aa0.77□□□□□ -2.29
TRAV40-201ENST00000390467 NCR3O14931 201 aa0.77□□□□□ -2.29
TRAV40-201ENST00000390467 SNRPGP62308 76 aaKnown RBP0.77□□□□□ -2.29
TRAV40-201ENST00000390467 SMIM11BQ8TCY0 68 aa0.77□□□□□ -2.29
TRAV40-201ENST00000390467 KCNQ1DNQ9H478 68 aa0.77□□□□□ -2.29
TRAV40-201ENST00000390467 DDX60LQ5H9U9 1706 aaKnown RBP0.77□□□□□ -2.29
TRAV40-201ENST00000390467 PLXNB2O15031 1838 aa0.77□□□□□ -2.29
TRAV40-201ENST00000390467 CACNA1BQ00975 2339 aa0.76□□□□□ -2.29
TRAV40-201ENST00000390467 KIF21BO75037 1637 aa0.76□□□□□ -2.29
TRAV40-201ENST00000390467 DEPDC5O75140 1603 aa0.76□□□□□ -2.29
TRAV40-201ENST00000390467 SSC5DA1L4H1 1573 aa0.76□□□□□ -2.29
TRAV40-201ENST00000390467 ETDCA0A1B0GVM5 59 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms