RNA–Protein interactions for RNA: ENST00000382381.7

ABCA3-202, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 6,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-202ENST00000382381 KIAA0087Q14695 138 aa9.03□□□□□ -0.96
ABCA3-202ENST00000382381 EPG5Q9HCE0 2579 aa9.02□□□□□ -0.97
ABCA3-202ENST00000382381 TMEM254Q8TBM7 123 aa9.02□□□□□ -0.97
ABCA3-202ENST00000382381 MOBPQ13875 183 aa9.02□□□□□ -0.97
ABCA3-202ENST00000382381 MUC7Q8TAX7 377 aa9.02□□□□□ -0.97
ABCA3-202ENST00000382381 CHTF8P0CG12 524 aa9.01□□□□□ -0.97
ABCA3-202ENST00000382381 SMIM29Q86T20 159 aa9.01□□□□□ -0.97
ABCA3-202ENST00000382381 C7orf65Q6ZTY9 151 aa9.01□□□□□ -0.97
ABCA3-202ENST00000382381 C1orf64Q8NEQ6 169 aa9.01□□□□□ -0.97
ABCA3-202ENST00000382381 MDFIQ99750 246 aa9□□□□□ -0.97
ABCA3-202ENST00000382381 MKI67P46013 3256 aaKnown RBP8.99□□□□□ -0.97
ABCA3-202ENST00000382381 FHL3Q13643 280 aa8.99□□□□□ -0.97
ABCA3-202ENST00000382381 USP24Q9UPU5 2620 aa8.98□□□□□ -0.97
ABCA3-202ENST00000382381 Q8N2B8 174 aa8.97□□□□□ -0.97
ABCA3-202ENST00000382381 CSDC2Q9Y534 153 aaKnown RBP8.96□□□□□ -0.97
ABCA3-202ENST00000382381 A0A1B0GUV1 79 aa8.96□□□□□ -0.98
ABCA3-202ENST00000382381 hDV103S1A0JD37 113 aa8.95□□□□□ -0.98
ABCA3-202ENST00000382381 LINC00167Q96N53 147 aa8.95□□□□□ -0.98
ABCA3-202ENST00000382381 PHF5AQ7RTV0 110 aaKnown RBP8.95□□□□□ -0.98
ABCA3-202ENST00000382381 SPAG11AQ6PDA7 123 aa8.94□□□□□ -0.98
ABCA3-202ENST00000382381 BRCA2P51587 3418 aa8.94□□□□□ -0.98
ABCA3-202ENST00000382381 SPATA3Q8NHX4 192 aa8.93□□□□□ -0.98
ABCA3-202ENST00000382381 RANBP2P49792 3224 aaKnown RBP8.93□□□□□ -0.98
ABCA3-202ENST00000382381 RPL37AP61513 92 aaKnown RBP8.93□□□□□ -0.98
ABCA3-202ENST00000382381 LAMA3Q16787 3333 aa8.92□□□□□ -0.98
ABCA3-202ENST00000382381 C6orf48Q9UBA6 75 aa8.91□□□□□ -0.98
ABCA3-202ENST00000382381 LIMD2Q9BT23 127 aa8.91□□□□□ -0.98
ABCA3-202ENST00000382381 A0A1B0GU69 56 aa8.91□□□□□ -0.98
ABCA3-202ENST00000382381 C11orf72Q8NBR9 251 aa8.9□□□□□ -0.98
ABCA3-202ENST00000382381 ST20-AS1Q8NBB2 130 aa8.89□□□□□ -0.99
ABCA3-202ENST00000382381 FAM218AQ96MZ4 157 aa8.89□□□□□ -0.99
ABCA3-202ENST00000382381 ANKRD17O75179 2603 aaKnown RBP8.89□□□□□ -0.99
ABCA3-202ENST00000382381 CHD7Q9P2D1 2997 aa8.89□□□□□ -0.99
ABCA3-202ENST00000382381 PCSK5Q92824 1860 aa8.88□□□□□ -0.99
ABCA3-202ENST00000382381 KIF25-AS1Q9Y6Z4 181 aa8.88□□□□□ -0.99
ABCA3-202ENST00000382381 IGHV3OR16-9A0A0B4J2B5 98 aa8.87□□□□□ -0.99
ABCA3-202ENST00000382381 HTTP42858 3142 aa8.87□□□□□ -0.99
ABCA3-202ENST00000382381 LINC00315P59091 139 aa8.87□□□□□ -0.99
ABCA3-202ENST00000382381 CDIP1Q9H305 208 aa8.86□□□□□ -0.99
ABCA3-202ENST00000382381 FLNBO75369 2602 aaKnown RBP8.86□□□□□ -0.99
ABCA3-202ENST00000382381 NHLRC4P0CG21 123 aaPredicted RBP8.85□□□□□ -0.99
ABCA3-202ENST00000382381 SERTAD4-AS1Q5TG53 156 aa8.85□□□□□ -0.99
ABCA3-202ENST00000382381 HECTD1Q9ULT8 2610 aa8.84□□□□□ -0.99
ABCA3-202ENST00000382381 C4orf26Q17RF5 130 aa8.83□□□□□ -1
ABCA3-202ENST00000382381 COX8CQ7Z4L0 72 aa8.83□□□□□ -1
ABCA3-202ENST00000382381 LINC00476Q8WZB0 136 aa8.82□□□□□ -1
ABCA3-202ENST00000382381 C16orf90A8MZG2 172 aa8.82□□□□□ -1
ABCA3-202ENST00000382381 EPM2AB3EWF7 344 aa8.82□□□□□ -1
ABCA3-202ENST00000382381 TYMSOSQ8TAI1 123 aa8.82□□□□□ -1
ABCA3-202ENST00000382381 MGAM2Q2M2H8 2515 aa8.81□□□□□ -1
ABCA3-202ENST00000382381 IGLV5-39A0A0G2JS06 123 aa8.81□□□□□ -1
ABCA3-202ENST00000382381 RTL8CO15255 209 aa8.81□□□□□ -1
ABCA3-202ENST00000382381 FAM168BA1KXE4 195 aa8.81□□□□□ -1
ABCA3-202ENST00000382381 SMCPP49901 116 aaPredicted RBP8.81□□□□□ -1
ABCA3-202ENST00000382381 CXCL6P80162 114 aa8.81□□□□□ -1
ABCA3-202ENST00000382381 ATP11AUNQ6ZP68 121 aa8.81□□□□□ -1
ABCA3-202ENST00000382381 Q96NJ1 140 aa8.8□□□□□ -1
ABCA3-202ENST00000382381 BPTFQ12830 3046 aa8.8□□□□□ -1
ABCA3-202ENST00000382381 PRRC2CQ9Y520 2896 aaKnown RBP8.79□□□□□ -1
ABCA3-202ENST00000382381 LINC00313P59037 77 aa8.79□□□□□ -1
ABCA3-202ENST00000382381 ACYP2P14621 99 aa8.78□□□□□ -1
ABCA3-202ENST00000382381 TM2D3Q9BRN9 247 aa8.78□□□□□ -1
ABCA3-202ENST00000382381 ATRQ13535 2644 aa8.78□□□□□ -1
ABCA3-202ENST00000382381 FAM229AH3BQW9 127 aa8.77□□□□□ -1
ABCA3-202ENST00000382381 F8WDY8 70 aa8.77□□□□□ -1.01
ABCA3-202ENST00000382381 COL27A1Q8IZC6 1860 aaPredicted RBP8.77□□□□□ -1.01
ABCA3-202ENST00000382381 LINC00588Q9Y4M8 146 aa8.76□□□□□ -1.01
ABCA3-202ENST00000382381 SPINT4Q6UDR6 99 aa8.76□□□□□ -1.01
ABCA3-202ENST00000382381 LINC01561Q8N1V8 128 aa8.75□□□□□ -1.01
ABCA3-202ENST00000382381 ELOF1P60002 83 aaKnown RBP8.74□□□□□ -1.01
ABCA3-202ENST00000382381 PRUNE2Q8WUY3 3088 aa8.74□□□□□ -1.01
ABCA3-202ENST00000382381 A0A0G2JQZ4 141 aa8.74□□□□□ -1.01
ABCA3-202ENST00000382381 A0A1W2PNN7 141 aa8.74□□□□□ -1.01
ABCA3-202ENST00000382381 Q6ZRX8 168 aa8.74□□□□□ -1.01
ABCA3-202ENST00000382381 NBDYA0A0U1RRE5 68 aa8.73□□□□□ -1.01
ABCA3-202ENST00000382381 Q6ZRP5 223 aa8.73□□□□□ -1.01
ABCA3-202ENST00000382381 Q6ZQT0 140 aa8.72□□□□□ -1.01
ABCA3-202ENST00000382381 DNAH10OSP0CZ25 163 aa8.72□□□□□ -1.01
ABCA3-202ENST00000382381 SSBP3-AS1Q7Z2R9 100 aa8.72□□□□□ -1.01
ABCA3-202ENST00000382381 Q8NBF4 154 aa8.71□□□□□ -1.02
ABCA3-202ENST00000382381 A0A0C4DFX4 3053 aa8.71□□□□□ -1.02
ABCA3-202ENST00000382381 J3QL48 77 aa8.71□□□□□ -1.02
ABCA3-202ENST00000382381 TRAV22A0A0B4J277 110 aa8.7□□□□□ -1.02
ABCA3-202ENST00000382381 C9orf92A6NGG3 77 aa8.7□□□□□ -1.02
ABCA3-202ENST00000382381 TP53AIP1Q9HCN2 124 aa8.7□□□□□ -1.02
ABCA3-202ENST00000382381 SMR3BP02814 79 aaPredicted RBP8.69□□□□□ -1.02
ABCA3-202ENST00000382381 TRBV7-4A0A0J9YYF1 115 aa8.69□□□□□ -1.02
ABCA3-202ENST00000382381 COX6B2Q6YFQ2 88 aa8.69□□□□□ -1.02
ABCA3-202ENST00000382381 FAM19A4Q96LR4 140 aa8.69□□□□□ -1.02
ABCA3-202ENST00000382381 APLNQ9ULZ1 77 aa8.67□□□□□ -1.02
ABCA3-202ENST00000382381 CHD9Q3L8U1 2897 aa8.67□□□□□ -1.02
ABCA3-202ENST00000382381 K7EQZ3 153 aa8.67□□□□□ -1.02
ABCA3-202ENST00000382381 Q8NAQ8 132 aa8.67□□□□□ -1.02
ABCA3-202ENST00000382381 ANAPC11Q9NYG5 84 aa8.67□□□□□ -1.02
ABCA3-202ENST00000382381 PRO0628Q9UI54 55 aa8.66□□□□□ -1.02
ABCA3-202ENST00000382381 MAST4O15021 2626 aa8.66□□□□□ -1.02
ABCA3-202ENST00000382381 LINC01600Q96MT4 127 aa8.66□□□□□ -1.02
ABCA3-202ENST00000382381 IGLV6-57P01721 117 aa8.65□□□□□ -1.02
ABCA3-202ENST00000382381 WWC2-AS2Q96NR7 200 aa8.65□□□□□ -1.02
ABCA3-202ENST00000382381 KRTAP10-11P60412 298 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms