RNA–Protein interactions for RNA: ENST00000373691.4

CXCR3-201, Transcript of C-X-C motif chemokine receptor 3, humanhuman

TSL 1 (best) BASIC

Gene CXCR3, Length 1,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR3-201ENST00000373691 LINC00846Q9NV44 126 aa13.63□□□□□ -0.23
CXCR3-201ENST00000373691 C6orf48Q9UBA6 75 aa13.63□□□□□ -0.23
CXCR3-201ENST00000373691 KPRPQ5T749 579 aaPredicted RBP13.62□□□□□ -0.23
CXCR3-201ENST00000373691 OTOGQ6ZRI0 2925 aa13.62□□□□□ -0.23
CXCR3-201ENST00000373691 RETNQ9HD89 108 aa13.61□□□□□ -0.23
CXCR3-201ENST00000373691 NSD1Q96L73 2696 aaPredicted RBP13.61□□□□□ -0.23
CXCR3-201ENST00000373691 VWFP04275 2813 aa13.61□□□□□ -0.23
CXCR3-201ENST00000373691 KRTAP10-11P60412 298 aa13.61□□□□□ -0.23
CXCR3-201ENST00000373691 WFDC10BQ8IUB3 73 aa13.6□□□□□ -0.23
CXCR3-201ENST00000373691 RPL18AQ02543 176 aaKnown RBP13.59□□□□□ -0.23
CXCR3-201ENST00000373691 OXLD1Q5BKU9 147 aa13.59□□□□□ -0.23
CXCR3-201ENST00000373691 KRTAP26-1Q6PEX3 210 aa13.59□□□□□ -0.23
CXCR3-201ENST00000373691 HIST1H4AP62805 103 aaKnown RBP13.58□□□□□ -0.24
CXCR3-201ENST00000373691 NBEAL2Q6ZNJ1 2754 aa13.58□□□□□ -0.24
CXCR3-201ENST00000373691 hADV29S1A0JD25 119 aa13.57□□□□□ -0.24
CXCR3-201ENST00000373691 SS18L2Q9UHA2 77 aa13.57□□□□□ -0.24
CXCR3-201ENST00000373691 EGFEM1PQ0D2K5 195 aa13.57□□□□□ -0.24
CXCR3-201ENST00000373691 Q6ZTC4 211 aa13.56□□□□□ -0.24
CXCR3-201ENST00000373691 H3BQ85 93 aa13.53□□□□□ -0.24
CXCR3-201ENST00000373691 ZNF561-AS1K7EIQ3 104 aa13.53□□□□□ -0.24
CXCR3-201ENST00000373691 TRAV23DV6A0A075B6W5 121 aa13.53□□□□□ -0.24
CXCR3-201ENST00000373691 IGKV3D-7A0A0C4DH55 119 aa13.53□□□□□ -0.24
CXCR3-201ENST00000373691 TRBV10-3A0A0K0K1G6 114 aa13.53□□□□□ -0.24
CXCR3-201ENST00000373691 CAMK2N2Q96S95 79 aa13.53□□□□□ -0.24
CXCR3-201ENST00000373691 TENM1Q9UKZ4 2725 aa13.52□□□□□ -0.25
CXCR3-201ENST00000373691 HIGD2BQ4VC39 106 aa13.51□□□□□ -0.25
CXCR3-201ENST00000373691 DIRC1Q969H9 104 aa13.51□□□□□ -0.25
CXCR3-201ENST00000373691 C2orf48Q96LS8 159 aa13.51□□□□□ -0.25
CXCR3-201ENST00000373691 XAGE1AQ9HD64 81 aa13.51□□□□□ -0.25
CXCR3-201ENST00000373691 ATOX1O00244 68 aa13.5□□□□□ -0.25
CXCR3-201ENST00000373691 ESRGQ1W209 222 aa13.5□□□□□ -0.25
CXCR3-201ENST00000373691 ATP5EP2Q5VTU8 51 aa13.5□□□□□ -0.25
CXCR3-201ENST00000373691 C3orf22Q8N5N4 141 aa13.5□□□□□ -0.25
CXCR3-201ENST00000373691 C15orf56Q8N910 161 aa13.5□□□□□ -0.25
CXCR3-201ENST00000373691 LOC110117498A0A087WWA1 95 aa13.48□□□□□ -0.25
CXCR3-201ENST00000373691 VPREB1P12018 145 aa13.48□□□□□ -0.25
CXCR3-201ENST00000373691 TRBV7-6A0A0J9YX20 115 aa13.48□□□□□ -0.25
CXCR3-201ENST00000373691 F8WDY8 70 aa13.48□□□□□ -0.25
CXCR3-201ENST00000373691 UQCRQO14949 82 aa13.48□□□□□ -0.25
CXCR3-201ENST00000373691 LINC01556Q5JQF7 62 aa13.48□□□□□ -0.25
CXCR3-201ENST00000373691 Q6ZRU5 148 aa13.47□□□□□ -0.25
CXCR3-201ENST00000373691 RBM3P98179 157 aaKnown RBP13.46□□□□□ -0.25
CXCR3-201ENST00000373691 Q6ZQT0 140 aa13.46□□□□□ -0.25
CXCR3-201ENST00000373691 ZNF73O43830 326 aaPredicted RBP13.46□□□□□ -0.26
CXCR3-201ENST00000373691 KRTAP24-1Q3LI83 254 aa13.46□□□□□ -0.26
CXCR3-201ENST00000373691 TEP1Q99973 2627 aaKnown RBP13.46□□□□□ -0.26
CXCR3-201ENST00000373691 M0R378 163 aa13.45□□□□□ -0.26
CXCR3-201ENST00000373691 COX7BP24311 80 aa13.45□□□□□ -0.26
CXCR3-201ENST00000373691 Q6ZQY7 126 aa13.45□□□□□ -0.26
CXCR3-201ENST00000373691 C1orf43Q9BWL3 253 aa13.45□□□□□ -0.26
CXCR3-201ENST00000373691 DEFB131BA0A096LNP1 70 aa13.44□□□□□ -0.26
CXCR3-201ENST00000373691 NDUFC2-KCTD14E9PQ53 114 aa13.44□□□□□ -0.26
CXCR3-201ENST00000373691 COX7CP15954 63 aa13.44□□□□□ -0.26
CXCR3-201ENST00000373691 ELOF1P60002 83 aaKnown RBP13.44□□□□□ -0.26
CXCR3-201ENST00000373691 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.44□□□□□ -0.26
CXCR3-201ENST00000373691 LAMTOR3Q9UHA4 124 aa13.44□□□□□ -0.26
CXCR3-201ENST00000373691 HIVEP1P15822 2718 aa13.44□□□□□ -0.26
CXCR3-201ENST00000373691 C9orf153Q5TBE3 101 aa13.42□□□□□ -0.26
CXCR3-201ENST00000373691 C11orf45Q8TAV5 145 aa13.42□□□□□ -0.26
CXCR3-201ENST00000373691 UBL5Q9BZL1 73 aa13.41□□□□□ -0.26
CXCR3-201ENST00000373691 ATRQ13535 2644 aa13.4□□□□□ -0.26
CXCR3-201ENST00000373691 GHRHP01286 108 aa13.4□□□□□ -0.26
CXCR3-201ENST00000373691 PDE6GP18545 87 aa13.4□□□□□ -0.26
CXCR3-201ENST00000373691 A0A087WVE0 104 aa13.4□□□□□ -0.26
CXCR3-201ENST00000373691 C3orf56Q8N813 242 aa13.4□□□□□ -0.26
CXCR3-201ENST00000373691 IGKV2D-24A0A075B6R9 120 aa13.38□□□□□ -0.27
CXCR3-201ENST00000373691 DNAH10OSP0CZ25 163 aa13.38□□□□□ -0.27
CXCR3-201ENST00000373691 DSCR8Q96T75 97 aa13.38□□□□□ -0.27
CXCR3-201ENST00000373691 USP17L23D6RBM5 183 aa13.36□□□□□ -0.27
CXCR3-201ENST00000373691 SYCNQ0VAF6 134 aa13.36□□□□□ -0.27
CXCR3-201ENST00000373691 Q6ZRP5 223 aa13.35□□□□□ -0.27
CXCR3-201ENST00000373691 CRYGAP11844 174 aa13.34□□□□□ -0.27
CXCR3-201ENST00000373691 LINC00528Q8N1L1 170 aa13.34□□□□□ -0.27
CXCR3-201ENST00000373691 SERP2Q8N6R1 65 aa13.33□□□□□ -0.27
CXCR3-201ENST00000373691 TRBV7-4A0A0J9YYF1 115 aa13.31□□□□□ -0.28
CXCR3-201ENST00000373691 M0R2N4 97 aa13.31□□□□□ -0.28
CXCR3-201ENST00000373691 TRAV10A0A0B4J240 114 aa13.3□□□□□ -0.28
CXCR3-201ENST00000373691 TLX1NBP0CAT3 122 aa13.29□□□□□ -0.28
CXCR3-201ENST00000373691 FAM19A1Q7Z5A9 133 aa13.29□□□□□ -0.28
CXCR3-201ENST00000373691 Q6ZVQ6 151 aa13.28□□□□□ -0.28
CXCR3-201ENST00000373691 UPK3BQ9BT76 320 aa13.27□□□□□ -0.29
CXCR3-201ENST00000373691 TRRAPQ9Y4A5 3859 aa13.27□□□□□ -0.29
CXCR3-201ENST00000373691 MAST4O15021 2626 aa13.26□□□□□ -0.29
CXCR3-201ENST00000373691 KCNQ1DNQ9H478 68 aa13.26□□□□□ -0.29
CXCR3-201ENST00000373691 PLA2G2DQ9UNK4 145 aa13.26□□□□□ -0.29
CXCR3-201ENST00000373691 F8P00451 2351 aa13.26□□□□□ -0.29
CXCR3-201ENST00000373691 NKAPP1Q8N9T2 125 aa13.25□□□□□ -0.29
CXCR3-201ENST00000373691 LINC01547P58512 204 aaPredicted RBP13.25□□□□□ -0.29
CXCR3-201ENST00000373691 LINC00588Q9Y4M8 146 aa13.25□□□□□ -0.29
CXCR3-201ENST00000373691 SERTAD4-AS1Q5TG53 156 aa13.23□□□□□ -0.29
CXCR3-201ENST00000373691 C7orf33Q8WU49 177 aa13.23□□□□□ -0.29
CXCR3-201ENST00000373691 CXCL6P80162 114 aa13.23□□□□□ -0.29
CXCR3-201ENST00000373691 MRAPQ8TCY5 172 aa13.23□□□□□ -0.29
CXCR3-201ENST00000373691 IGLV5-37A0A075B6J1 123 aa13.21□□□□□ -0.29
CXCR3-201ENST00000373691 BCE1O60756 84 aa13.21□□□□□ -0.29
CXCR3-201ENST00000373691 TM2D3Q9BRN9 247 aa13.21□□□□□ -0.29
CXCR3-201ENST00000373691 SMIM20Q8N5G0 67 aa13.21□□□□□ -0.3
CXCR3-201ENST00000373691 RMI2Q96E14 147 aa13.2□□□□□ -0.3
CXCR3-201ENST00000373691 HAMPP81172 84 aa13.19□□□□□ -0.3
CXCR3-201ENST00000373691 PRYO14603 147 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms