RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 C1orf134Q5TEV5 83 aa9.88□□□□□ -0.83
RAPGEF1-202ENST00000372190 IGLV5-52A0A0A0MRZ9 124 aa9.88□□□□□ -0.83
RAPGEF1-202ENST00000372190 C11orf72Q8NBR9 251 aa9.87□□□□□ -0.83
RAPGEF1-202ENST00000372190 EXPH5Q8NEV8 1989 aa9.87□□□□□ -0.83
RAPGEF1-202ENST00000372190 CHCHD7Q9BUK0 85 aa9.86□□□□□ -0.83
RAPGEF1-202ENST00000372190 A0A096LNJ9 63 aa9.86□□□□□ -0.83
RAPGEF1-202ENST00000372190 C6orf223Q8N319 242 aa9.86□□□□□ -0.83
RAPGEF1-202ENST00000372190 FHL3Q13643 280 aa9.86□□□□□ -0.83
RAPGEF1-202ENST00000372190 LINC00337Q8N6G1 96 aa9.85□□□□□ -0.83
RAPGEF1-202ENST00000372190 COX8CQ7Z4L0 72 aa9.84□□□□□ -0.83
RAPGEF1-202ENST00000372190 ABCA2Q9BZC7 2435 aa9.84□□□□□ -0.83
RAPGEF1-202ENST00000372190 HCFC1P51610 2035 aa9.84□□□□□ -0.83
RAPGEF1-202ENST00000372190 LOC110117498A0A087WWA1 95 aa9.83□□□□□ -0.84
RAPGEF1-202ENST00000372190 TLN1Q9Y490 2541 aaKnown RBP9.83□□□□□ -0.84
RAPGEF1-202ENST00000372190 A0A0A0MQY5 61 aa9.83□□□□□ -0.84
RAPGEF1-202ENST00000372190 C2orf48Q96LS8 159 aa9.83□□□□□ -0.84
RAPGEF1-202ENST00000372190 KIAA0087Q14695 138 aa9.82□□□□□ -0.84
RAPGEF1-202ENST00000372190 Q6ZQT0 140 aa9.82□□□□□ -0.84
RAPGEF1-202ENST00000372190 RBM12B-AS1Q9P1G2 102 aa9.81□□□□□ -0.84
RAPGEF1-202ENST00000372190 APLNQ9ULZ1 77 aa9.81□□□□□ -0.84
RAPGEF1-202ENST00000372190 A8MTW9 85 aa9.8□□□□□ -0.84
RAPGEF1-202ENST00000372190 CDC42SE1Q9NRR8 79 aa9.8□□□□□ -0.84
RAPGEF1-202ENST00000372190 PLXNB1O43157 2135 aa9.78□□□□□ -0.84
RAPGEF1-202ENST00000372190 KLKP1Q107X0 134 aa9.78□□□□□ -0.84
RAPGEF1-202ENST00000372190 LINC01556Q5JQF7 62 aa9.77□□□□□ -0.85
RAPGEF1-202ENST00000372190 SORL1Q92673 2214 aa9.77□□□□□ -0.85
RAPGEF1-202ENST00000372190 EPM2AB3EWF7 344 aa9.76□□□□□ -0.85
RAPGEF1-202ENST00000372190 SMCR5Q8TEV8 140 aa9.76□□□□□ -0.85
RAPGEF1-202ENST00000372190 IGLV4-60A0A075B6I1 120 aa9.75□□□□□ -0.85
RAPGEF1-202ENST00000372190 GOLGB1Q14789 3259 aaKnown RBP9.75□□□□□ -0.85
RAPGEF1-202ENST00000372190 TET2Q6N021 2002 aaPredicted RBP9.75□□□□□ -0.85
RAPGEF1-202ENST00000372190 ANKRD11Q6UB99 2663 aaPredicted RBP9.75□□□□□ -0.85
RAPGEF1-202ENST00000372190 LYPD5Q6UWN5 251 aa9.74□□□□□ -0.85
RAPGEF1-202ENST00000372190 C9orf129Q5T035 196 aaKnown RBP9.73□□□□□ -0.85
RAPGEF1-202ENST00000372190 Q8NBF4 154 aa9.73□□□□□ -0.85
RAPGEF1-202ENST00000372190 LINC01546A6NGU7 62 aa9.72□□□□□ -0.85
RAPGEF1-202ENST00000372190 ZNF462Q96JM2 2506 aa9.71□□□□□ -0.85
RAPGEF1-202ENST00000372190 MOBPQ13875 183 aa9.71□□□□□ -0.85
RAPGEF1-202ENST00000372190 CSNK1G2-AS1Q8NCQ2 148 aa9.71□□□□□ -0.86
RAPGEF1-202ENST00000372190 MYO18BQ8IUG5 2567 aa9.7□□□□□ -0.86
RAPGEF1-202ENST00000372190 SPTBN4Q9H254 2564 aa9.7□□□□□ -0.86
RAPGEF1-202ENST00000372190 FAM218AQ96MZ4 157 aa9.7□□□□□ -0.86
RAPGEF1-202ENST00000372190 Q6ZSN1 163 aa9.7□□□□□ -0.86
RAPGEF1-202ENST00000372190 CEP295Q9C0D2 2601 aa9.69□□□□□ -0.86
RAPGEF1-202ENST00000372190 LINC00313P59037 77 aa9.69□□□□□ -0.86
RAPGEF1-202ENST00000372190 A0A1B0GUV1 79 aa9.68□□□□□ -0.86
RAPGEF1-202ENST00000372190 H7BZZ5 65 aa9.68□□□□□ -0.86
RAPGEF1-202ENST00000372190 IGLV5-39A0A0G2JS06 123 aa9.67□□□□□ -0.86
RAPGEF1-202ENST00000372190 TRBV7-4A0A0J9YYF1 115 aa9.67□□□□□ -0.86
RAPGEF1-202ENST00000372190 WWC2-AS2Q96NR7 200 aa9.66□□□□□ -0.86
RAPGEF1-202ENST00000372190 PCSK5Q92824 1860 aa9.66□□□□□ -0.86
RAPGEF1-202ENST00000372190 LRRK2Q5S007 2527 aa9.66□□□□□ -0.86
RAPGEF1-202ENST00000372190 C22orf24Q9Y442 160 aa9.65□□□□□ -0.86
RAPGEF1-202ENST00000372190 FAM229AH3BQW9 127 aa9.65□□□□□ -0.86
RAPGEF1-202ENST00000372190 A8MWP4 228 aa9.65□□□□□ -0.87
RAPGEF1-202ENST00000372190 JMJD1CQ15652 2540 aa9.64□□□□□ -0.87
RAPGEF1-202ENST00000372190 WDR87Q6ZQQ6 2873 aa9.64□□□□□ -0.87
RAPGEF1-202ENST00000372190 LINC00476Q8WZB0 136 aa9.63□□□□□ -0.87
RAPGEF1-202ENST00000372190 Q1T7F1 81 aa9.63□□□□□ -0.87
RAPGEF1-202ENST00000372190 Q6ZRU5 148 aa9.63□□□□□ -0.87
RAPGEF1-202ENST00000372190 CHD8Q9HCK8 2581 aa9.63□□□□□ -0.87
RAPGEF1-202ENST00000372190 COL27A1Q8IZC6 1860 aaPredicted RBP9.63□□□□□ -0.87
RAPGEF1-202ENST00000372190 KIF25-AS1Q9Y6Z4 181 aa9.62□□□□□ -0.87
RAPGEF1-202ENST00000372190 RPL37AP61513 92 aaKnown RBP9.61□□□□□ -0.87
RAPGEF1-202ENST00000372190 SPACA4Q8TDM5 124 aa9.61□□□□□ -0.87
RAPGEF1-202ENST00000372190 MRPL34Q9BQ48 92 aaKnown RBP9.6□□□□□ -0.87
RAPGEF1-202ENST00000372190 ZFYVE26Q68DK2 2539 aa9.59□□□□□ -0.87
RAPGEF1-202ENST00000372190 ABCA12Q86UK0 2595 aa9.58□□□□□ -0.88
RAPGEF1-202ENST00000372190 K7EQZ3 153 aa9.57□□□□□ -0.88
RAPGEF1-202ENST00000372190 AGRNO00468 2067 aa9.57□□□□□ -0.88
RAPGEF1-202ENST00000372190 MUC4Q99102 2169 aa9.55□□□□□ -0.88
RAPGEF1-202ENST00000372190 CENPFP49454 3210 aa9.54□□□□□ -0.88
RAPGEF1-202ENST00000372190 SPANXA2-OT1Q8N9U9 137 aa9.54□□□□□ -0.88
RAPGEF1-202ENST00000372190 LINC00315P59091 139 aa9.53□□□□□ -0.88
RAPGEF1-202ENST00000372190 LINC00167Q96N53 147 aa9.53□□□□□ -0.88
RAPGEF1-202ENST00000372190 H3BNG1 76 aa9.53□□□□□ -0.88
RAPGEF1-202ENST00000372190 Q6ZRX8 168 aa9.52□□□□□ -0.88
RAPGEF1-202ENST00000372190 DMAC1Q96GE9 116 aa9.52□□□□□ -0.89
RAPGEF1-202ENST00000372190 C16orf90A8MZG2 172 aa9.51□□□□□ -0.89
RAPGEF1-202ENST00000372190 NBDYA0A0U1RRE5 68 aa9.51□□□□□ -0.89
RAPGEF1-202ENST00000372190 C8orf17Q9NRJ1 99 aa9.51□□□□□ -0.89
RAPGEF1-202ENST00000372190 A0A096LNT2 108 aa9.5□□□□□ -0.89
RAPGEF1-202ENST00000372190 LINC00483Q53H64 154 aa9.5□□□□□ -0.89
RAPGEF1-202ENST00000372190 PKD1L2Q7Z442 2459 aa9.5□□□□□ -0.89
RAPGEF1-202ENST00000372190 MYO9AB2RTY4 2548 aa9.5□□□□□ -0.89
RAPGEF1-202ENST00000372190 IGLV5-45A0A087WSX0 123 aa9.5□□□□□ -0.89
RAPGEF1-202ENST00000372190 FASNP49327 2511 aaKnown RBP9.5□□□□□ -0.89
RAPGEF1-202ENST00000372190 IGHV3OR16-9A0A0B4J2B5 98 aa9.49□□□□□ -0.89
RAPGEF1-202ENST00000372190 Q96NJ1 140 aa9.49□□□□□ -0.89
RAPGEF1-202ENST00000372190 Q8NAQ8 132 aa9.49□□□□□ -0.89
RAPGEF1-202ENST00000372190 K7EIL1 84 aa9.48□□□□□ -0.89
RAPGEF1-202ENST00000372190 KRTAP10-11P60412 298 aa9.48□□□□□ -0.89
RAPGEF1-202ENST00000372190 RTL8CO15255 209 aa9.46□□□□□ -0.9
RAPGEF1-202ENST00000372190 TLN2Q9Y4G6 2542 aa9.46□□□□□ -0.9
RAPGEF1-202ENST00000372190 USP9XQ93008 2570 aaPredicted RBP9.46□□□□□ -0.9
RAPGEF1-202ENST00000372190 FN1P02751 2386 aaKnown RBP9.46□□□□□ -0.9
RAPGEF1-202ENST00000372190 FAM104AQ969W3 186 aa9.45□□□□□ -0.9
RAPGEF1-202ENST00000372190 LINC00588Q9Y4M8 146 aa9.45□□□□□ -0.9
RAPGEF1-202ENST00000372190 Q75L30 129 aa9.44□□□□□ -0.9
RAPGEF1-202ENST00000372190 ANKRD17O75179 2603 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms