RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 ERC2-IT1O76042 136 aa8.56□□□□□ -1.04
CTNNB1-201ENST00000349496 LMO4P61968 165 aa8.56□□□□□ -1.04
CTNNB1-201ENST00000349496 PSCAO43653 123 aa8.56□□□□□ -1.04
CTNNB1-201ENST00000349496 PRAC1Q96KF2 57 aa8.56□□□□□ -1.04
CTNNB1-201ENST00000349496 ZNF706Q9Y5V0 76 aaPredicted RBP8.56□□□□□ -1.04
CTNNB1-201ENST00000349496 Q6ZQT0 140 aa8.56□□□□□ -1.04
CTNNB1-201ENST00000349496 RNF5Q99942 180 aa8.56□□□□□ -1.04
CTNNB1-201ENST00000349496 PDE6GP18545 87 aa8.55□□□□□ -1.04
CTNNB1-201ENST00000349496 SPINK13Q1W4C9 94 aa8.55□□□□□ -1.04
CTNNB1-201ENST00000349496 C6orf99Q4VX62 202 aa8.55□□□□□ -1.04
CTNNB1-201ENST00000349496 LINC00242Q5T6M2 205 aa8.55□□□□□ -1.04
CTNNB1-201ENST00000349496 Q5VV11 94 aa8.55□□□□□ -1.04
CTNNB1-201ENST00000349496 LINC01006Q8NI28 216 aa8.55□□□□□ -1.04
CTNNB1-201ENST00000349496 LINC01554Q52M75 96 aa8.54□□□□□ -1.04
CTNNB1-201ENST00000349496 PHF5AQ7RTV0 110 aaKnown RBP8.54□□□□□ -1.04
CTNNB1-201ENST00000349496 FN1P02751 2386 aaKnown RBP8.53□□□□□ -1.04
CTNNB1-201ENST00000349496 H3BUX3 64 aa8.53□□□□□ -1.04
CTNNB1-201ENST00000349496 IGHV4-30-2A0A087WSY4 118 aa8.53□□□□□ -1.04
CTNNB1-201ENST00000349496 PRR3P79522 188 aaKnown RBP8.53□□□□□ -1.04
CTNNB1-201ENST00000349496 PRM2P04554 102 aa8.53□□□□□ -1.04
CTNNB1-201ENST00000349496 FBXL19-AS1Q494R0 122 aa8.53□□□□□ -1.04
CTNNB1-201ENST00000349496 MP68P56378 58 aa8.52□□□□□ -1.05
CTNNB1-201ENST00000349496 IGHV3OR16-12A0A075B7B8 117 aa8.52□□□□□ -1.05
CTNNB1-201ENST00000349496 FLNAP21333 2647 aaKnown RBP8.52□□□□□ -1.05
CTNNB1-201ENST00000349496 Q6ZQY7 126 aa8.52□□□□□ -1.05
CTNNB1-201ENST00000349496 NBEAL2Q6ZNJ1 2754 aa8.51□□□□□ -1.05
CTNNB1-201ENST00000349496 C9orf116Q5BN46 136 aaPredicted RBP8.51□□□□□ -1.05
CTNNB1-201ENST00000349496 IGLV5-39A0A0G2JS06 123 aa8.51□□□□□ -1.05
CTNNB1-201ENST00000349496 ITPR2Q14571 2701 aa8.5□□□□□ -1.05
CTNNB1-201ENST00000349496 C3orf84H3BNL1 204 aa8.5□□□□□ -1.05
CTNNB1-201ENST00000349496 TRBV6-4A0A1B0GX49 114 aa8.5□□□□□ -1.05
CTNNB1-201ENST00000349496 C5orf56Q8N8D9 126 aa8.49□□□□□ -1.05
CTNNB1-201ENST00000349496 APCP25054 2843 aa8.49□□□□□ -1.05
CTNNB1-201ENST00000349496 SMIM29Q86T20 159 aa8.49□□□□□ -1.05
CTNNB1-201ENST00000349496 ITPR3Q14573 2671 aa8.49□□□□□ -1.05
CTNNB1-201ENST00000349496 HIVEP2P31629 2446 aa8.49□□□□□ -1.05
CTNNB1-201ENST00000349496 HECTD1Q9ULT8 2610 aa8.48□□□□□ -1.05
CTNNB1-201ENST00000349496 DNAJC9-AS1A6NH13 148 aa8.48□□□□□ -1.05
CTNNB1-201ENST00000349496 INSP01308 110 aa8.48□□□□□ -1.05
CTNNB1-201ENST00000349496 CASC2Q6XLA1 102 aa8.48□□□□□ -1.05
CTNNB1-201ENST00000349496 MUC7Q8TAX7 377 aa8.48□□□□□ -1.05
CTNNB1-201ENST00000349496 CHCHD7Q9BUK0 85 aa8.48□□□□□ -1.05
CTNNB1-201ENST00000349496 A8MTW9 85 aa8.48□□□□□ -1.05
CTNNB1-201ENST00000349496 HIGD2BQ4VC39 106 aa8.48□□□□□ -1.05
CTNNB1-201ENST00000349496 B9D2Q9BPU9 175 aa8.48□□□□□ -1.05
CTNNB1-201ENST00000349496 RHPN1-AS1Q9BWJ2 59 aa8.47□□□□□ -1.05
CTNNB1-201ENST00000349496 LINC00208Q96KT6 92 aa8.47□□□□□ -1.05
CTNNB1-201ENST00000349496 CCL19Q99731 98 aa8.47□□□□□ -1.05
CTNNB1-201ENST00000349496 ESM1Q9NQ30 184 aa8.47□□□□□ -1.05
CTNNB1-201ENST00000349496 RETNLBQ9BQ08 111 aa8.46□□□□□ -1.05
CTNNB1-201ENST00000349496 A6NN06 94 aa8.46□□□□□ -1.06
CTNNB1-201ENST00000349496 NDUFB1O75438 58 aa8.46□□□□□ -1.06
CTNNB1-201ENST00000349496 IGHV4-59P01825 116 aa8.46□□□□□ -1.06
CTNNB1-201ENST00000349496 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.46□□□□□ -1.06
CTNNB1-201ENST00000349496 SPATA3Q8NHX4 192 aa8.46□□□□□ -1.06
CTNNB1-201ENST00000349496 CYP4F30PQ9H0H9 118 aa8.46□□□□□ -1.06
CTNNB1-201ENST00000349496 NDUFA4O00483 81 aa8.45□□□□□ -1.06
CTNNB1-201ENST00000349496 IGHV3-53P01767 116 aa8.45□□□□□ -1.06
CTNNB1-201ENST00000349496 MINOS1Q5TGZ0 78 aa8.45□□□□□ -1.06
CTNNB1-201ENST00000349496 OCR1Q9BZK8 76 aa8.45□□□□□ -1.06
CTNNB1-201ENST00000349496 MINOS1-NBL1R4GNA1 71 aa8.45□□□□□ -1.06
CTNNB1-201ENST00000349496 DEFB136Q30KP8 78 aa8.45□□□□□ -1.06
CTNNB1-201ENST00000349496 LINC00313P59037 77 aa8.44□□□□□ -1.06
CTNNB1-201ENST00000349496 FSHBP01225 129 aa8.44□□□□□ -1.06
CTNNB1-201ENST00000349496 HELZ2Q9BYK8 2649 aaKnown RBP8.44□□□□□ -1.06
CTNNB1-201ENST00000349496 C18orf65Q6ZTR6 163 aa8.43□□□□□ -1.06
CTNNB1-201ENST00000349496 WFDC10AQ9H1F0 79 aa8.43□□□□□ -1.06
CTNNB1-201ENST00000349496 IGLV5-45A0A087WSX0 123 aa8.43□□□□□ -1.06
CTNNB1-201ENST00000349496 LOC110117498A0A087WWA1 95 aa8.42□□□□□ -1.06
CTNNB1-201ENST00000349496 KRTAP10-9P60411 292 aa8.42□□□□□ -1.06
CTNNB1-201ENST00000349496 CDC42SE1Q9NRR8 79 aa8.42□□□□□ -1.06
CTNNB1-201ENST00000349496 TRGV2A0A075B6R0 118 aa8.42□□□□□ -1.06
CTNNB1-201ENST00000349496 TENM4Q6N022 2769 aa8.42□□□□□ -1.06
CTNNB1-201ENST00000349496 FASNP49327 2511 aaKnown RBP8.41□□□□□ -1.06
CTNNB1-201ENST00000349496 SPAG11BQ08648 103 aa8.41□□□□□ -1.06
CTNNB1-201ENST00000349496 K7EQD1 137 aa8.4□□□□□ -1.06
CTNNB1-201ENST00000349496 SETXQ7Z333 2677 aaKnown RBP8.4□□□□□ -1.06
CTNNB1-201ENST00000349496 ETDCA0A1B0GVM5 59 aa8.4□□□□□ -1.06
CTNNB1-201ENST00000349496 KLLNB2CW77 178 aa8.4□□□□□ -1.06
CTNNB1-201ENST00000349496 DEFB112Q30KQ8 113 aa8.4□□□□□ -1.06
CTNNB1-201ENST00000349496 FAM104AQ969W3 186 aa8.4□□□□□ -1.06
CTNNB1-201ENST00000349496 GCN1Q92616 2671 aaKnown RBP8.4□□□□□ -1.06
CTNNB1-201ENST00000349496 LINC00575Q6W349 94 aa8.39□□□□□ -1.07
CTNNB1-201ENST00000349496 MOBPQ13875 183 aa8.39□□□□□ -1.07
CTNNB1-201ENST00000349496 Q8N9P0 234 aaPredicted RBP8.39□□□□□ -1.07
CTNNB1-201ENST00000349496 KLK12Q9UKR0 248 aa8.39□□□□□ -1.07
CTNNB1-201ENST00000349496 LOC101927531A0A1B0GV80 90 aa8.38□□□□□ -1.07
CTNNB1-201ENST00000349496 IGKV4-1P06312 121 aa8.38□□□□□ -1.07
CTNNB1-201ENST00000349496 IGLV4-60A0A075B6I1 120 aa8.37□□□□□ -1.07
CTNNB1-201ENST00000349496 SPAG11AQ6PDA7 123 aa8.37□□□□□ -1.07
CTNNB1-201ENST00000349496 REG3AQ06141 175 aa8.37□□□□□ -1.07
CTNNB1-201ENST00000349496 C10orf25Q5T742 122 aa8.37□□□□□ -1.07
CTNNB1-201ENST00000349496 MSMBP08118 114 aa8.37□□□□□ -1.07
CTNNB1-201ENST00000349496 UBR5O95071 2799 aaPredicted RBP8.36□□□□□ -1.07
CTNNB1-201ENST00000349496 Q6ZSN1 163 aa8.36□□□□□ -1.07
CTNNB1-201ENST00000349496 COX7BP24311 80 aa8.36□□□□□ -1.07
CTNNB1-201ENST00000349496 TRGV1A0A0A0MS02 117 aa8.35□□□□□ -1.07
CTNNB1-201ENST00000349496 DEFB105AQ8NG35 78 aa8.35□□□□□ -1.07
CTNNB1-201ENST00000349496 DEFB116Q30KQ4 102 aa8.35□□□□□ -1.07
CTNNB1-201ENST00000349496 VWFP04275 2813 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms