RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 MDFIQ99750 246 aa11.13□□□□□ -0.63
BRD3-201ENST00000303407 TMEM254Q8TBM7 123 aa11.13□□□□□ -0.63
BRD3-201ENST00000303407 H0Y9P7 68 aa11.11□□□□□ -0.63
BRD3-201ENST00000303407 Q6ZQT0 140 aa11.1□□□□□ -0.63
BRD3-201ENST00000303407 PMAIP1Q13794 54 aa11.09□□□□□ -0.63
BRD3-201ENST00000303407 RETNLBQ9BQ08 111 aa11.08□□□□□ -0.64
BRD3-201ENST00000303407 SMIM29Q86T20 159 aa11.08□□□□□ -0.64
BRD3-201ENST00000303407 MYO9AB2RTY4 2548 aa11.08□□□□□ -0.64
BRD3-201ENST00000303407 PCOTHQ58A44 107 aa11.08□□□□□ -0.64
BRD3-201ENST00000303407 C5orf42Q9H799 3197 aa11.07□□□□□ -0.64
BRD3-201ENST00000303407 LOC110117498A0A087WWA1 95 aa11.07□□□□□ -0.64
BRD3-201ENST00000303407 LINC00588Q9Y4M8 146 aa11.07□□□□□ -0.64
BRD3-201ENST00000303407 PCNTO95613 3336 aa11.06□□□□□ -0.64
BRD3-201ENST00000303407 GVQW2A0A096LPI5 108 aaPredicted RBP11.06□□□□□ -0.64
BRD3-201ENST00000303407 Q6ZRX8 168 aa11.05□□□□□ -0.64
BRD3-201ENST00000303407 CHD7Q9P2D1 2997 aa11.04□□□□□ -0.64
BRD3-201ENST00000303407 PHF5AQ7RTV0 110 aaKnown RBP11.03□□□□□ -0.64
BRD3-201ENST00000303407 Q6ZRP5 223 aa11.02□□□□□ -0.64
BRD3-201ENST00000303407 GIG44P09565 113 aaPredicted RBP11.02□□□□□ -0.64
BRD3-201ENST00000303407 KRTAP10-3P60369 221 aa11.02□□□□□ -0.65
BRD3-201ENST00000303407 EIF4EBP3O60516 100 aaPredicted RBP11.02□□□□□ -0.65
BRD3-201ENST00000303407 IGLV6-57P01721 117 aa11.01□□□□□ -0.65
BRD3-201ENST00000303407 CRYGAP11844 174 aa11.01□□□□□ -0.65
BRD3-201ENST00000303407 ST20-AS1Q8NBB2 130 aa11.01□□□□□ -0.65
BRD3-201ENST00000303407 C19orf73Q9NVV2 129 aa10.99□□□□□ -0.65
BRD3-201ENST00000303407 ABCA12Q86UK0 2595 aa10.99□□□□□ -0.65
BRD3-201ENST00000303407 HTTP42858 3142 aa10.99□□□□□ -0.65
BRD3-201ENST00000303407 VPREB1P12018 145 aa10.99□□□□□ -0.65
BRD3-201ENST00000303407 C16orf90A8MZG2 172 aa10.98□□□□□ -0.65
BRD3-201ENST00000303407 LINC00476Q8WZB0 136 aa10.98□□□□□ -0.65
BRD3-201ENST00000303407 ZNF462Q96JM2 2506 aa10.98□□□□□ -0.65
BRD3-201ENST00000303407 USP9XQ93008 2570 aaPredicted RBP10.98□□□□□ -0.65
BRD3-201ENST00000303407 DNAH10OSP0CZ25 163 aa10.98□□□□□ -0.65
BRD3-201ENST00000303407 KRTAP10-11P60412 298 aa10.97□□□□□ -0.65
BRD3-201ENST00000303407 hDV103S1A0JD37 113 aa10.97□□□□□ -0.65
BRD3-201ENST00000303407 C1orf64Q8NEQ6 169 aa10.97□□□□□ -0.65
BRD3-201ENST00000303407 BCE1O60756 84 aa10.97□□□□□ -0.65
BRD3-201ENST00000303407 A0A1B0GW54 56 aa10.96□□□□□ -0.65
BRD3-201ENST00000303407 MOBPQ13875 183 aa10.96□□□□□ -0.65
BRD3-201ENST00000303407 FAM168BA1KXE4 195 aa10.96□□□□□ -0.66
BRD3-201ENST00000303407 Q8NBF4 154 aa10.95□□□□□ -0.66
BRD3-201ENST00000303407 NBDYA0A0U1RRE5 68 aa10.95□□□□□ -0.66
BRD3-201ENST00000303407 EPM2AB3EWF7 344 aa10.95□□□□□ -0.66
BRD3-201ENST00000303407 PSPHP1O15172 72 aa10.95□□□□□ -0.66
BRD3-201ENST00000303407 LIMD2Q9BT23 127 aa10.94□□□□□ -0.66
BRD3-201ENST00000303407 CHD8Q9HCK8 2581 aa10.93□□□□□ -0.66
BRD3-201ENST00000303407 SERTAD4-AS1Q5TG53 156 aa10.93□□□□□ -0.66
BRD3-201ENST00000303407 KRTAP1-3Q8IUG1 177 aa10.93□□□□□ -0.66
BRD3-201ENST00000303407 LRRK2Q5S007 2527 aa10.92□□□□□ -0.66
BRD3-201ENST00000303407 RTL8CO15255 209 aa10.92□□□□□ -0.66
BRD3-201ENST00000303407 MYO18BQ8IUG5 2567 aa10.92□□□□□ -0.66
BRD3-201ENST00000303407 ANKRD17O75179 2603 aaKnown RBP10.92□□□□□ -0.66
BRD3-201ENST00000303407 LINC00612Q8N6U2 182 aa10.92□□□□□ -0.66
BRD3-201ENST00000303407 TLN2Q9Y4G6 2542 aa10.91□□□□□ -0.66
BRD3-201ENST00000303407 CHTF8P0CG12 524 aa10.91□□□□□ -0.66
BRD3-201ENST00000303407 MUC4Q99102 2169 aa10.91□□□□□ -0.66
BRD3-201ENST00000303407 PRR34Q9NV39 138 aa10.9□□□□□ -0.66
BRD3-201ENST00000303407 SPTBN4Q9H254 2564 aa10.9□□□□□ -0.66
BRD3-201ENST00000303407 ZNF575Q86XF7 245 aa10.9□□□□□ -0.67
BRD3-201ENST00000303407 CHD9Q3L8U1 2897 aa10.88□□□□□ -0.67
BRD3-201ENST00000303407 C15orf56Q8N910 161 aa10.88□□□□□ -0.67
BRD3-201ENST00000303407 TM2D3Q9BRN9 247 aa10.88□□□□□ -0.67
BRD3-201ENST00000303407 USP9YO00507 2555 aaPredicted RBP10.88□□□□□ -0.67
BRD3-201ENST00000303407 IGLV1-50A0A075B6I6 118 aa10.87□□□□□ -0.67
BRD3-201ENST00000303407 RPL37AP61513 92 aaKnown RBP10.86□□□□□ -0.67
BRD3-201ENST00000303407 KCNQ1DNQ9H478 68 aa10.85□□□□□ -0.67
BRD3-201ENST00000303407 TP53AIP1Q9HCN2 124 aa10.85□□□□□ -0.67
BRD3-201ENST00000303407 FN1P02751 2386 aaKnown RBP10.85□□□□□ -0.67
BRD3-201ENST00000303407 DOPEY1Q5JWR5 2465 aa10.85□□□□□ -0.67
BRD3-201ENST00000303407 SPINK1P00995 79 aa10.84□□□□□ -0.67
BRD3-201ENST00000303407 JMJD1CQ15652 2540 aa10.84□□□□□ -0.67
BRD3-201ENST00000303407 LINC00528Q8N1L1 170 aa10.83□□□□□ -0.68
BRD3-201ENST00000303407 TRBV7-4A0A0J9YYF1 115 aa10.83□□□□□ -0.68
BRD3-201ENST00000303407 SPACA4Q8TDM5 124 aa10.82□□□□□ -0.68
BRD3-201ENST00000303407 K7EIL1 84 aa10.82□□□□□ -0.68
BRD3-201ENST00000303407 KRTAP1-1Q07627 177 aa10.82□□□□□ -0.68
BRD3-201ENST00000303407 C9orf129Q5T035 196 aaKnown RBP10.81□□□□□ -0.68
BRD3-201ENST00000303407 POLQO75417 2590 aa10.81□□□□□ -0.68
BRD3-201ENST00000303407 IGKV2D-30A0A075B6S6 120 aa10.8□□□□□ -0.68
BRD3-201ENST00000303407 IGKV2-30P06310 120 aa10.8□□□□□ -0.68
BRD3-201ENST00000303407 PRO0628Q9UI54 55 aa10.79□□□□□ -0.68
BRD3-201ENST00000303407 RPS28P62857 69 aaKnown RBP10.78□□□□□ -0.68
BRD3-201ENST00000303407 PKD1L2Q7Z442 2459 aa10.78□□□□□ -0.68
BRD3-201ENST00000303407 K7EQZ3 153 aa10.76□□□□□ -0.69
BRD3-201ENST00000303407 C4orf26Q17RF5 130 aa10.76□□□□□ -0.69
BRD3-201ENST00000303407 SETD2Q9BYW2 2564 aaPredicted RBP10.76□□□□□ -0.69
BRD3-201ENST00000303407 H3BPC8 53 aa10.75□□□□□ -0.69
BRD3-201ENST00000303407 C7orf65Q6ZTY9 151 aa10.75□□□□□ -0.69
BRD3-201ENST00000303407 TRAV22A0A0B4J277 110 aa10.73□□□□□ -0.69
BRD3-201ENST00000303407 A8MWP4 228 aa10.73□□□□□ -0.69
BRD3-201ENST00000303407 IGFL1Q6UW32 110 aa10.72□□□□□ -0.69
BRD3-201ENST00000303407 Q8N377 158 aa10.71□□□□□ -0.69
BRD3-201ENST00000303407 LINC00313P59037 77 aa10.71□□□□□ -0.69
BRD3-201ENST00000303407 ZFYVE26Q68DK2 2539 aa10.71□□□□□ -0.69
BRD3-201ENST00000303407 MKI67P46013 3256 aaKnown RBP10.71□□□□□ -0.69
BRD3-201ENST00000303407 TLX1NBP0CAT3 122 aa10.71□□□□□ -0.69
BRD3-201ENST00000303407 PLA2G2DQ9UNK4 145 aa10.7□□□□□ -0.7
BRD3-201ENST00000303407 ACYP2P14621 99 aa10.69□□□□□ -0.7
BRD3-201ENST00000303407 PRRC2CQ9Y520 2896 aaKnown RBP10.68□□□□□ -0.7
BRD3-201ENST00000303407 TYMSOSQ8TAI1 123 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms