RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 RBM12B-AS1Q9P1G2 102 aa9.48□□□□□ -0.89
GABPB1-201ENST00000220429 Q9UF83 564 aa9.48□□□□□ -0.89
GABPB1-201ENST00000220429 ERC2-IT1O76042 136 aa9.48□□□□□ -0.89
GABPB1-201ENST00000220429 Q6ZSN1 163 aa9.48□□□□□ -0.89
GABPB1-201ENST00000220429 PRYO14603 147 aa9.47□□□□□ -0.89
GABPB1-201ENST00000220429 CXCL6P80162 114 aa9.47□□□□□ -0.89
GABPB1-201ENST00000220429 Q6ZVQ6 151 aa9.47□□□□□ -0.89
GABPB1-201ENST00000220429 Q6ZRP5 223 aa9.46□□□□□ -0.9
GABPB1-201ENST00000220429 GCN1Q92616 2671 aaKnown RBP9.46□□□□□ -0.9
GABPB1-201ENST00000220429 CCL18P55774 89 aa9.45□□□□□ -0.9
GABPB1-201ENST00000220429 Q6ZQT0 140 aa9.45□□□□□ -0.9
GABPB1-201ENST00000220429 Q8N814 137 aa9.44□□□□□ -0.9
GABPB1-201ENST00000220429 FAM19A3Q7Z5A8 133 aa9.44□□□□□ -0.9
GABPB1-201ENST00000220429 HIVEP2P31629 2446 aa9.43□□□□□ -0.9
GABPB1-201ENST00000220429 LINC00158P58513 81 aa9.43□□□□□ -0.9
GABPB1-201ENST00000220429 TRBV10-1A0A0K0K1A3 114 aa9.43□□□□□ -0.9
GABPB1-201ENST00000220429 hDV103S1A0JD37 113 aa9.43□□□□□ -0.9
GABPB1-201ENST00000220429 LRCOL1A6NCL2 159 aa9.42□□□□□ -0.9
GABPB1-201ENST00000220429 PSPHP1O15172 72 aa9.42□□□□□ -0.9
GABPB1-201ENST00000220429 IGHV3-53P01767 116 aa9.42□□□□□ -0.9
GABPB1-201ENST00000220429 KTN1-AS1Q86SY8 53 aa9.42□□□□□ -0.9
GABPB1-201ENST00000220429 HECTD1Q9ULT8 2610 aa9.42□□□□□ -0.9
GABPB1-201ENST00000220429 BPY2O14599 106 aa9.42□□□□□ -0.9
GABPB1-201ENST00000220429 SMR3AQ99954 134 aa9.41□□□□□ -0.9
GABPB1-201ENST00000220429 M0R2N4 97 aa9.41□□□□□ -0.9
GABPB1-201ENST00000220429 LOC110117498A0A087WWA1 95 aa9.4□□□□□ -0.9
GABPB1-201ENST00000220429 LY6G6DO95868 133 aa9.4□□□□□ -0.9
GABPB1-201ENST00000220429 WFDC10AQ9H1F0 79 aa9.4□□□□□ -0.9
GABPB1-201ENST00000220429 IGLV1-51P01701 117 aa9.39□□□□□ -0.91
GABPB1-201ENST00000220429 GIG44P09565 113 aaPredicted RBP9.39□□□□□ -0.91
GABPB1-201ENST00000220429 C11orf45Q8TAV5 145 aa9.39□□□□□ -0.91
GABPB1-201ENST00000220429 TRGV1A0A0A0MS02 117 aa9.39□□□□□ -0.91
GABPB1-201ENST00000220429 TRBV6-4A0A1B0GX49 114 aa9.39□□□□□ -0.91
GABPB1-201ENST00000220429 NOTCH2Q04721 2471 aa9.39□□□□□ -0.91
GABPB1-201ENST00000220429 C19orf73Q9NVV2 129 aa9.38□□□□□ -0.91
GABPB1-201ENST00000220429 TRAV22A0A0B4J277 110 aa9.37□□□□□ -0.91
GABPB1-201ENST00000220429 COX7B2Q8TF08 81 aa9.37□□□□□ -0.91
GABPB1-201ENST00000220429 OTOGQ6ZRI0 2925 aa9.37□□□□□ -0.91
GABPB1-201ENST00000220429 C2CD3Q4AC94 2353 aa9.37□□□□□ -0.91
GABPB1-201ENST00000220429 SCXQ7RTU7 201 aa9.37□□□□□ -0.91
GABPB1-201ENST00000220429 NTM-AS1Q6ZSK4 140 aa9.36□□□□□ -0.91
GABPB1-201ENST00000220429 LINC00588Q9Y4M8 146 aa9.36□□□□□ -0.91
GABPB1-201ENST00000220429 FN1P02751 2386 aaKnown RBP9.36□□□□□ -0.91
GABPB1-201ENST00000220429 CMC4P56277 68 aaPredicted RBP9.36□□□□□ -0.91
GABPB1-201ENST00000220429 TOMM7Q9P0U1 55 aa9.35□□□□□ -0.91
GABPB1-201ENST00000220429 KRTAP10-3P60369 221 aa9.35□□□□□ -0.91
GABPB1-201ENST00000220429 HIGD2AQ9BW72 106 aa9.35□□□□□ -0.91
GABPB1-201ENST00000220429 M0R378 163 aa9.34□□□□□ -0.91
GABPB1-201ENST00000220429 VWFP04275 2813 aa9.34□□□□□ -0.91
GABPB1-201ENST00000220429 A8MU10 97 aa9.34□□□□□ -0.91
GABPB1-201ENST00000220429 APOC4P55056 127 aa9.34□□□□□ -0.91
GABPB1-201ENST00000220429 UBE2BP63146 152 aa9.34□□□□□ -0.91
GABPB1-201ENST00000220429 C1orf64Q8NEQ6 169 aa9.34□□□□□ -0.91
GABPB1-201ENST00000220429 SYCNQ0VAF6 134 aa9.33□□□□□ -0.92
GABPB1-201ENST00000220429 OCR1Q9BZK8 76 aa9.33□□□□□ -0.92
GABPB1-201ENST00000220429 NOP10Q9NPE3 64 aaKnown RBP9.33□□□□□ -0.92
GABPB1-201ENST00000220429 K7EQD1 137 aa9.33□□□□□ -0.92
GABPB1-201ENST00000220429 LYRM9A8MSI8 78 aa9.32□□□□□ -0.92
GABPB1-201ENST00000220429 CSNK1G2-AS1Q8NCQ2 148 aa9.32□□□□□ -0.92
GABPB1-201ENST00000220429 NSD1Q96L73 2696 aaPredicted RBP9.32□□□□□ -0.92
GABPB1-201ENST00000220429 CD164L2Q6UWJ8 174 aa9.32□□□□□ -0.92
GABPB1-201ENST00000220429 NANOS2P60321 138 aaKnown RBP9.31□□□□□ -0.92
GABPB1-201ENST00000220429 C16orf74Q96GX8 76 aa9.31□□□□□ -0.92
GABPB1-201ENST00000220429 PDE6GP18545 87 aa9.3□□□□□ -0.92
GABPB1-201ENST00000220429 CDC42SE2Q9NRR3 84 aa9.3□□□□□ -0.92
GABPB1-201ENST00000220429 A8MUN3 132 aa9.29□□□□□ -0.92
GABPB1-201ENST00000220429 C9orf66Q5T8R8 295 aa9.29□□□□□ -0.92
GABPB1-201ENST00000220429 NDUFS5O43920 106 aa9.27□□□□□ -0.92
GABPB1-201ENST00000220429 TENM1Q9UKZ4 2725 aa9.27□□□□□ -0.93
GABPB1-201ENST00000220429 TRGV2A0A075B6R0 118 aa9.27□□□□□ -0.93
GABPB1-201ENST00000220429 NBEAL2Q6ZNJ1 2754 aa9.26□□□□□ -0.93
GABPB1-201ENST00000220429 INAFM1C9JVW0 142 aa9.25□□□□□ -0.93
GABPB1-201ENST00000220429 HIVEP1P15822 2718 aa9.25□□□□□ -0.93
GABPB1-201ENST00000220429 LOC100131303A0A0U1RQF7 123 aa9.25□□□□□ -0.93
GABPB1-201ENST00000220429 LINC00269Q8N2A0 174 aa9.25□□□□□ -0.93
GABPB1-201ENST00000220429 MUC7Q8TAX7 377 aa9.25□□□□□ -0.93
GABPB1-201ENST00000220429 TRRAPQ9Y4A5 3859 aa9.25□□□□□ -0.93
GABPB1-201ENST00000220429 PRR3P79522 188 aaKnown RBP9.25□□□□□ -0.93
GABPB1-201ENST00000220429 LINC00575Q6W349 94 aa9.25□□□□□ -0.93
GABPB1-201ENST00000220429 SPATA3Q8NHX4 192 aa9.25□□□□□ -0.93
GABPB1-201ENST00000220429 Q5VV11 94 aa9.24□□□□□ -0.93
GABPB1-201ENST00000220429 Q8N9L7 120 aa9.24□□□□□ -0.93
GABPB1-201ENST00000220429 PSCAO43653 123 aa9.24□□□□□ -0.93
GABPB1-201ENST00000220429 C16orf90A8MZG2 172 aa9.23□□□□□ -0.93
GABPB1-201ENST00000220429 ZNF73O43830 326 aaPredicted RBP9.23□□□□□ -0.93
GABPB1-201ENST00000220429 UBE2AP49459 152 aa9.23□□□□□ -0.93
GABPB1-201ENST00000220429 C6orf99Q4VX62 202 aa9.23□□□□□ -0.93
GABPB1-201ENST00000220429 IGKV4-1P06312 121 aa9.23□□□□□ -0.93
GABPB1-201ENST00000220429 PHF5AQ7RTV0 110 aaKnown RBP9.23□□□□□ -0.93
GABPB1-201ENST00000220429 SPTSSBQ8NFR3 76 aa9.23□□□□□ -0.93
GABPB1-201ENST00000220429 TRGV4A0A0C4DH28 118 aa9.22□□□□□ -0.93
GABPB1-201ENST00000220429 ATRQ13535 2644 aa9.2□□□□□ -0.94
GABPB1-201ENST00000220429 C8orf87E5RJ46 101 aa9.2□□□□□ -0.94
GABPB1-201ENST00000220429 H3BS24 57 aa9.2□□□□□ -0.94
GABPB1-201ENST00000220429 UBE2L6O14933 153 aa9.2□□□□□ -0.94
GABPB1-201ENST00000220429 ATP11AUNQ6ZP68 121 aa9.19□□□□□ -0.94
GABPB1-201ENST00000220429 TRBV6-8A0A0A6YYG3 113 aa9.19□□□□□ -0.94
GABPB1-201ENST00000220429 CHKB-CPT1BH3BT56 60 aa9.19□□□□□ -0.94
GABPB1-201ENST00000220429 TEP1Q99973 2627 aaKnown RBP9.19□□□□□ -0.94
GABPB1-201ENST00000220429 IGKV3OR2-268A0A0C4DH90 116 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms