RNA–Protein interactions for RNA: ENST00000204005.13

LTBP4-201, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP4, Length 5,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-201ENST00000204005 C1orf137Q5JT78 98 aa13.11□□□□□ -0.31
LTBP4-201ENST00000204005 Q6ZVQ6 151 aa13.11□□□□□ -0.31
LTBP4-201ENST00000204005 HELZ2Q9BYK8 2649 aaKnown RBP13.11□□□□□ -0.31
LTBP4-201ENST00000204005 C10orf25Q5T742 122 aa13.11□□□□□ -0.31
LTBP4-201ENST00000204005 CENPEQ02224 2701 aa13.1□□□□□ -0.31
LTBP4-201ENST00000204005 SPINK6Q6UWN8 80 aa13.09□□□□□ -0.31
LTBP4-201ENST00000204005 HRCT1Q6UXD1 115 aa13.08□□□□□ -0.32
LTBP4-201ENST00000204005 FAM30AQ9NZY2 134 aa13.08□□□□□ -0.32
LTBP4-201ENST00000204005 SERP1Q9Y6X1 66 aa13.08□□□□□ -0.32
LTBP4-201ENST00000204005 SMIM26A0A096LP01 95 aa13.07□□□□□ -0.32
LTBP4-201ENST00000204005 KRTAP1-3Q8IUG1 177 aa13.07□□□□□ -0.32
LTBP4-201ENST00000204005 CSNK1G2-AS1Q8NCQ2 148 aa13.07□□□□□ -0.32
LTBP4-201ENST00000204005 LINC01547P58512 204 aaPredicted RBP13.07□□□□□ -0.32
LTBP4-201ENST00000204005 A0A0C4DFX4 3053 aa13.06□□□□□ -0.32
LTBP4-201ENST00000204005 ITPR3Q14573 2671 aa13.06□□□□□ -0.32
LTBP4-201ENST00000204005 MDFIQ99750 246 aa13.05□□□□□ -0.32
LTBP4-201ENST00000204005 C6orf48Q9UBA6 75 aa13.04□□□□□ -0.32
LTBP4-201ENST00000204005 USP24Q9UPU5 2620 aa13.04□□□□□ -0.32
LTBP4-201ENST00000204005 C22orf24Q9Y442 160 aa13.03□□□□□ -0.32
LTBP4-201ENST00000204005 MGAM2Q2M2H8 2515 aa13.03□□□□□ -0.32
LTBP4-201ENST00000204005 CFAP46Q8IYW2 2715 aa13.02□□□□□ -0.32
LTBP4-201ENST00000204005 CXCL6P80162 114 aa13.01□□□□□ -0.33
LTBP4-201ENST00000204005 V9GYY9 64 aa13□□□□□ -0.33
LTBP4-201ENST00000204005 PRR4Q16378 134 aa13□□□□□ -0.33
LTBP4-201ENST00000204005 C19orf73Q9NVV2 129 aa13□□□□□ -0.33
LTBP4-201ENST00000204005 CRYGAP11844 174 aa12.99□□□□□ -0.33
LTBP4-201ENST00000204005 Q9BRP9 147 aa12.99□□□□□ -0.33
LTBP4-201ENST00000204005 PRUNE2Q8WUY3 3088 aa12.98□□□□□ -0.33
LTBP4-201ENST00000204005 MGAQ8IWI9 3026 aa12.98□□□□□ -0.33
LTBP4-201ENST00000204005 KRTAP10-3P60369 221 aa12.96□□□□□ -0.33
LTBP4-201ENST00000204005 KRTAP1-1Q07627 177 aa12.96□□□□□ -0.33
LTBP4-201ENST00000204005 SPATA3Q8NHX4 192 aa12.96□□□□□ -0.33
LTBP4-201ENST00000204005 GIG44P09565 113 aaPredicted RBP12.96□□□□□ -0.34
LTBP4-201ENST00000204005 A0A0U1RQV1 116 aa12.96□□□□□ -0.34
LTBP4-201ENST00000204005 LINC00588Q9Y4M8 146 aa12.96□□□□□ -0.34
LTBP4-201ENST00000204005 ATRQ13535 2644 aa12.95□□□□□ -0.34
LTBP4-201ENST00000204005 EIF4EBP3O60516 100 aaPredicted RBP12.95□□□□□ -0.34
LTBP4-201ENST00000204005 PRLHP81277 87 aa12.95□□□□□ -0.34
LTBP4-201ENST00000204005 TMEM254Q8TBM7 123 aa12.95□□□□□ -0.34
LTBP4-201ENST00000204005 ZNF575Q86XF7 245 aa12.94□□□□□ -0.34
LTBP4-201ENST00000204005 LINC00167Q96N53 147 aa12.93□□□□□ -0.34
LTBP4-201ENST00000204005 SPTSSBQ8NFR3 76 aa12.92□□□□□ -0.34
LTBP4-201ENST00000204005 CASC2Q6XLA1 102 aa12.91□□□□□ -0.34
LTBP4-201ENST00000204005 CIRBP-AS1Q8TBR5 109 aa12.91□□□□□ -0.34
LTBP4-201ENST00000204005 SMCR5Q8TEV8 140 aa12.91□□□□□ -0.34
LTBP4-201ENST00000204005 LAMA2P24043 3122 aaKnown RBP12.9□□□□□ -0.34
LTBP4-201ENST00000204005 A0A087WSZ3 146 aa12.9□□□□□ -0.34
LTBP4-201ENST00000204005 TRBV7-6A0A0J9YX20 115 aa12.9□□□□□ -0.34
LTBP4-201ENST00000204005 BCE1O60756 84 aa12.9□□□□□ -0.34
LTBP4-201ENST00000204005 Q6ZQT0 140 aa12.9□□□□□ -0.34
LTBP4-201ENST00000204005 KRTAP10-11P60412 298 aa12.89□□□□□ -0.35
LTBP4-201ENST00000204005 DNAH10OSP0CZ25 163 aa12.89□□□□□ -0.35
LTBP4-201ENST00000204005 LINC00208Q96KT6 92 aa12.89□□□□□ -0.35
LTBP4-201ENST00000204005 LOC110117498A0A087WWA1 95 aa12.88□□□□□ -0.35
LTBP4-201ENST00000204005 GVQW2A0A096LPI5 108 aaPredicted RBP12.88□□□□□ -0.35
LTBP4-201ENST00000204005 NBDYA0A0U1RRE5 68 aa12.88□□□□□ -0.35
LTBP4-201ENST00000204005 ELOF1P60002 83 aaKnown RBP12.88□□□□□ -0.35
LTBP4-201ENST00000204005 Q8N9L7 120 aa12.87□□□□□ -0.35
LTBP4-201ENST00000204005 LINC00612Q8N6U2 182 aa12.87□□□□□ -0.35
LTBP4-201ENST00000204005 KIAA0087Q14695 138 aa12.86□□□□□ -0.35
LTBP4-201ENST00000204005 K7EIL1 84 aa12.84□□□□□ -0.35
LTBP4-201ENST00000204005 UNC80Q8N2C7 3258 aa12.84□□□□□ -0.35
LTBP4-201ENST00000204005 WDFY4Q6ZS81 3184 aa12.84□□□□□ -0.35
LTBP4-201ENST00000204005 SEC61GP60059 68 aa12.83□□□□□ -0.36
LTBP4-201ENST00000204005 MAST4O15021 2626 aa12.82□□□□□ -0.36
LTBP4-201ENST00000204005 RPS28P62857 69 aaKnown RBP12.81□□□□□ -0.36
LTBP4-201ENST00000204005 CFAP54Q96N23 3096 aa12.81□□□□□ -0.36
LTBP4-201ENST00000204005 HCG22E2RYF7 251 aa12.8□□□□□ -0.36
LTBP4-201ENST00000204005 C16orf90A8MZG2 172 aa12.79□□□□□ -0.36
LTBP4-201ENST00000204005 DEFB116Q30KQ4 102 aa12.79□□□□□ -0.36
LTBP4-201ENST00000204005 PRR34Q9NV39 138 aa12.78□□□□□ -0.36
LTBP4-201ENST00000204005 IGHV6-1A0A0B4J1U7 121 aa12.78□□□□□ -0.36
LTBP4-201ENST00000204005 IGLV6-57P01721 117 aa12.77□□□□□ -0.36
LTBP4-201ENST00000204005 TRIOO75962 3097 aa12.77□□□□□ -0.37
LTBP4-201ENST00000204005 Q6ZRX8 168 aa12.77□□□□□ -0.37
LTBP4-201ENST00000204005 A0A1B0GW54 56 aa12.77□□□□□ -0.37
LTBP4-201ENST00000204005 A6NED7 52 aa12.77□□□□□ -0.37
LTBP4-201ENST00000204005 Q6ZRP5 223 aa12.76□□□□□ -0.37
LTBP4-201ENST00000204005 SMIM29Q86T20 159 aa12.75□□□□□ -0.37
LTBP4-201ENST00000204005 AKAP13Q12802 2813 aa12.75□□□□□ -0.37
LTBP4-201ENST00000204005 VPREB1P12018 145 aa12.74□□□□□ -0.37
LTBP4-201ENST00000204005 H0Y9P7 68 aa12.73□□□□□ -0.37
LTBP4-201ENST00000204005 PHF5AQ7RTV0 110 aaKnown RBP12.73□□□□□ -0.37
LTBP4-201ENST00000204005 RTL8CO15255 209 aa12.73□□□□□ -0.37
LTBP4-201ENST00000204005 C1orf195Q5TG92 126 aa12.73□□□□□ -0.37
LTBP4-201ENST00000204005 SVIPQ8NHG7 77 aa12.71□□□□□ -0.37
LTBP4-201ENST00000204005 WWC2-AS2Q96NR7 200 aa12.71□□□□□ -0.37
LTBP4-201ENST00000204005 DSPP15924 2871 aaKnown RBP12.71□□□□□ -0.37
LTBP4-201ENST00000204005 PRR15LQ9BU68 103 aa12.7□□□□□ -0.38
LTBP4-201ENST00000204005 Q8NBF4 154 aa12.69□□□□□ -0.38
LTBP4-201ENST00000204005 TM2D3Q9BRN9 247 aa12.68□□□□□ -0.38
LTBP4-201ENST00000204005 hDV103S1A0JD37 113 aa12.67□□□□□ -0.38
LTBP4-201ENST00000204005 CDH23Q9H251 3354 aa12.67□□□□□ -0.38
LTBP4-201ENST00000204005 LIMD2Q9BT23 127 aa12.67□□□□□ -0.38
LTBP4-201ENST00000204005 XIRP2A4UGR9 3374 aa12.66□□□□□ -0.38
LTBP4-201ENST00000204005 EPM2AB3EWF7 344 aa12.65□□□□□ -0.38
LTBP4-201ENST00000204005 CHTF8P0CG12 524 aa12.65□□□□□ -0.38
LTBP4-201ENST00000204005 PSPHP1O15172 72 aa12.64□□□□□ -0.39
LTBP4-201ENST00000204005 MOBPQ13875 183 aa12.64□□□□□ -0.39
LTBP4-201ENST00000204005 PCOTHQ58A44 107 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms