RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 SPANXB1Q9NS25 103 aaPredicted RBP8.43□□□□□ -1.06
TNFAIP3-211ENST00000621150 VPS13DQ5THJ4 4388 aa8.42□□□□□ -1.06
TNFAIP3-211ENST00000621150 TRAV10A0A0B4J240 114 aa8.42□□□□□ -1.06
TNFAIP3-211ENST00000621150 A0A1B0GV90 55 aa8.41□□□□□ -1.06
TNFAIP3-211ENST00000621150 CCL25O15444 150 aa8.41□□□□□ -1.06
TNFAIP3-211ENST00000621150 FXYD2P54710 66 aa8.41□□□□□ -1.06
TNFAIP3-211ENST00000621150 CEND1Q8N111 149 aa8.41□□□□□ -1.06
TNFAIP3-211ENST00000621150 PRR34Q9NV39 138 aa8.41□□□□□ -1.06
TNFAIP3-211ENST00000621150 A0A087WZ39 114 aa8.4□□□□□ -1.06
TNFAIP3-211ENST00000621150 A0A0J9YXY3 114 aa8.4□□□□□ -1.06
TNFAIP3-211ENST00000621150 ESRGQ1W209 222 aa8.4□□□□□ -1.06
TNFAIP3-211ENST00000621150 LITAFQ99732 161 aa8.4□□□□□ -1.06
TNFAIP3-211ENST00000621150 NDUFA12Q9UI09 145 aa8.4□□□□□ -1.06
TNFAIP3-211ENST00000621150 K7EP13 123 aa8.4□□□□□ -1.07
TNFAIP3-211ENST00000621150 TAX1BP3O14907 124 aa8.4□□□□□ -1.07
TNFAIP3-211ENST00000621150 NDUFA1O15239 70 aa8.4□□□□□ -1.07
TNFAIP3-211ENST00000621150 SCGB1D4Q6XE38 83 aa8.4□□□□□ -1.07
TNFAIP3-211ENST00000621150 LINC00269Q8N2A0 174 aa8.4□□□□□ -1.07
TNFAIP3-211ENST00000621150 DNAH10Q8IVF4 4471 aa8.39□□□□□ -1.07
TNFAIP3-211ENST00000621150 IGKV3OR2-268A0A0C4DH90 116 aa8.39□□□□□ -1.07
TNFAIP3-211ENST00000621150 LINC01561Q8N1V8 128 aa8.39□□□□□ -1.07
TNFAIP3-211ENST00000621150 ZNF625Q96I27 306 aaPredicted RBP8.39□□□□□ -1.07
TNFAIP3-211ENST00000621150 ANGP03950 147 aaKnown RBP8.38□□□□□ -1.07
TNFAIP3-211ENST00000621150 REG3AQ06141 175 aa8.38□□□□□ -1.07
TNFAIP3-211ENST00000621150 WFDC10BQ8IUB3 73 aa8.38□□□□□ -1.07
TNFAIP3-211ENST00000621150 C15orf53Q8NAA6 179 aa8.38□□□□□ -1.07
TNFAIP3-211ENST00000621150 HIST1H4GQ99525 98 aa8.38□□□□□ -1.07
TNFAIP3-211ENST00000621150 A0A1B0GWB2 263 aa8.37□□□□□ -1.07
TNFAIP3-211ENST00000621150 IGHV3-30P01768 117 aa8.37□□□□□ -1.07
TNFAIP3-211ENST00000621150 IGHV3-30-5P0DP03 117 aa8.37□□□□□ -1.07
TNFAIP3-211ENST00000621150 SS18Q15532 418 aa8.37□□□□□ -1.07
TNFAIP3-211ENST00000621150 CLPSL2Q6UWE3 100 aa8.37□□□□□ -1.07
TNFAIP3-211ENST00000621150 DNAH6Q9C0G6 4158 aa8.37□□□□□ -1.07
TNFAIP3-211ENST00000621150 TIMM17BO60830 172 aa8.36□□□□□ -1.07
TNFAIP3-211ENST00000621150 ENHOQ6UWT2 76 aa8.36□□□□□ -1.07
TNFAIP3-211ENST00000621150 A6NDN8 102 aa8.36□□□□□ -1.07
TNFAIP3-211ENST00000621150 Q6ZVH6 145 aa8.36□□□□□ -1.07
TNFAIP3-211ENST00000621150 CHCHD10Q8WYQ3 142 aaPredicted RBP8.36□□□□□ -1.07
TNFAIP3-211ENST00000621150 XCL1P47992 114 aa8.35□□□□□ -1.07
TNFAIP3-211ENST00000621150 C5orf38Q86SI9 138 aa8.35□□□□□ -1.07
TNFAIP3-211ENST00000621150 SPANXDQ9BXN6 97 aa8.35□□□□□ -1.07
TNFAIP3-211ENST00000621150 SPANXCQ9NY87 97 aa8.35□□□□□ -1.07
TNFAIP3-211ENST00000621150 COX11Q9Y6N1 276 aa8.35□□□□□ -1.07
TNFAIP3-211ENST00000621150 HECTD4Q9Y4D8 3996 aa8.34□□□□□ -1.07
TNFAIP3-211ENST00000621150 IGLL5B9A064 214 aa8.34□□□□□ -1.07
TNFAIP3-211ENST00000621150 TMEM238C9JI98 176 aa8.34□□□□□ -1.07
TNFAIP3-211ENST00000621150 SEC61BP60468 96 aaKnown RBP8.34□□□□□ -1.07
TNFAIP3-211ENST00000621150 FOXI1Q12951 378 aa8.34□□□□□ -1.07
TNFAIP3-211ENST00000621150 LINC01556Q5JQF7 62 aa8.34□□□□□ -1.07
TNFAIP3-211ENST00000621150 ADAMTSL4-AS1Q5T5F5 129 aa8.34□□□□□ -1.07
TNFAIP3-211ENST00000621150 KLK12Q9UKR0 248 aa8.34□□□□□ -1.07
TNFAIP3-211ENST00000621150 APLNQ9ULZ1 77 aa8.34□□□□□ -1.07
TNFAIP3-211ENST00000621150 SRSF9Q13242 221 aaKnown RBP eCLIP8.33□□□□□ -1.08
TNFAIP3-211ENST00000621150 COX7B2Q8TF08 81 aa8.33□□□□□ -1.08
TNFAIP3-211ENST00000621150 IGHV3-33P01772 117 aa8.32□□□□□ -1.08
TNFAIP3-211ENST00000621150 DNAH10OSP0CZ25 163 aa8.32□□□□□ -1.08
TNFAIP3-211ENST00000621150 KRTAP26-1Q6PEX3 210 aa8.32□□□□□ -1.08
TNFAIP3-211ENST00000621150 KIAA0087Q14695 138 aa8.32□□□□□ -1.08
TNFAIP3-211ENST00000621150 NHP2Q9NX24 153 aaKnown RBP8.32□□□□□ -1.08
TNFAIP3-211ENST00000621150 LINC00588Q9Y4M8 146 aa8.32□□□□□ -1.08
TNFAIP3-211ENST00000621150 IGLV10-54A0A075B6I4 117 aa8.31□□□□□ -1.08
TNFAIP3-211ENST00000621150 TRAV8-4A0A0B4J246 113 aa8.31□□□□□ -1.08
TNFAIP3-211ENST00000621150 K7ERJ3 54 aa8.31□□□□□ -1.08
TNFAIP3-211ENST00000621150 COX7A2LO14548 114 aa8.31□□□□□ -1.08
TNFAIP3-211ENST00000621150 MIAQ16674 131 aa8.31□□□□□ -1.08
TNFAIP3-211ENST00000621150 Q8IZM0 81 aa8.31□□□□□ -1.08
TNFAIP3-211ENST00000621150 DNAH2Q9P225 4427 aa8.3□□□□□ -1.08
TNFAIP3-211ENST00000621150 SMIM13P0DJ93 91 aa8.3□□□□□ -1.08
TNFAIP3-211ENST00000621150 MUSTN1Q8IVN3 82 aa8.3□□□□□ -1.08
TNFAIP3-211ENST00000621150 UPK3BQ9BT76 320 aa8.3□□□□□ -1.08
TNFAIP3-211ENST00000621150 PPDPFQ9H3Y8 114 aa8.29□□□□□ -1.08
TNFAIP3-211ENST00000621150 SFTA2Q6UW10 78 aa8.29□□□□□ -1.08
TNFAIP3-211ENST00000621150 UBE2WQ96B02 151 aa8.29□□□□□ -1.08
TNFAIP3-211ENST00000621150 CFC1BP0CG36 223 aa8.28□□□□□ -1.08
TNFAIP3-211ENST00000621150 CFC1P0CG37 223 aa8.28□□□□□ -1.08
TNFAIP3-211ENST00000621150 IFITM1P13164 125 aa8.28□□□□□ -1.08
TNFAIP3-211ENST00000621150 TOMM7Q9P0U1 55 aa8.28□□□□□ -1.08
TNFAIP3-211ENST00000621150 FAT2Q9NYQ8 4349 aa8.27□□□□□ -1.09
TNFAIP3-211ENST00000621150 CRPP02741 224 aa8.27□□□□□ -1.09
TNFAIP3-211ENST00000621150 CCL18P55774 89 aa8.26□□□□□ -1.09
TNFAIP3-211ENST00000621150 RPL24P83731 157 aaKnown RBP8.26□□□□□ -1.09
TNFAIP3-211ENST00000621150 CIRBPQ14011 172 aaKnown RBP8.26□□□□□ -1.09
TNFAIP3-211ENST00000621150 SOSTDC1Q6X4U4 206 aa8.26□□□□□ -1.09
TNFAIP3-211ENST00000621150 RAB37Q96AX2 223 aa8.26□□□□□ -1.09
TNFAIP3-211ENST00000621150 A0A0B4J2C4 111 aa8.25□□□□□ -1.09
TNFAIP3-211ENST00000621150 IBA57-AS1B1ANH7 110 aa8.25□□□□□ -1.09
TNFAIP3-211ENST00000621150 SEC61GP60059 68 aa8.25□□□□□ -1.09
TNFAIP3-211ENST00000621150 DAND5Q8N907 189 aa8.25□□□□□ -1.09
TNFAIP3-211ENST00000621150 LINC00308Q8TCZ7 52 aa8.25□□□□□ -1.09
TNFAIP3-211ENST00000621150 H3BUT2 72 aa8.25□□□□□ -1.09
TNFAIP3-211ENST00000621150 CXCL5P42830 114 aa8.25□□□□□ -1.09
TNFAIP3-211ENST00000621150 LINC01620Q4KN68 170 aa8.25□□□□□ -1.09
TNFAIP3-211ENST00000621150 C6orf226Q5I0X4 101 aa8.25□□□□□ -1.09
TNFAIP3-211ENST00000621150 PKHD1P08F94 4074 aa8.24□□□□□ -1.09
TNFAIP3-211ENST00000621150 MEIG1Q5JSS6 88 aa8.24□□□□□ -1.09
TNFAIP3-211ENST00000621150 C2orf82Q6UX34 121 aa8.24□□□□□ -1.09
TNFAIP3-211ENST00000621150 NAA38Q9BRA0 125 aaKnown RBP8.24□□□□□ -1.09
TNFAIP3-211ENST00000621150 DNAH17Q9UFH2 4485 aa8.24□□□□□ -1.09
TNFAIP3-211ENST00000621150 A0A1W2PPM0 123 aa8.23□□□□□ -1.09
TNFAIP3-211ENST00000621150 PRSS2P07478 247 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms