RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 IGKV2D-28P01615 120 aa3.87□□□□□ -1.79
LINC01541-202ENST00000568095 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.87□□□□□ -1.79
LINC01541-202ENST00000568095 TRAV13-1A0A0B4J241 112 aa3.87□□□□□ -1.79
LINC01541-202ENST00000568095 IGKV2-29A2NJV5 120 aaPredicted RBP3.87□□□□□ -1.79
LINC01541-202ENST00000568095 NDUFC2O95298 119 aa3.87□□□□□ -1.79
LINC01541-202ENST00000568095 LINC00167Q96N53 147 aa3.87□□□□□ -1.79
LINC01541-202ENST00000568095 IGHV3-53P01767 116 aa3.86□□□□□ -1.79
LINC01541-202ENST00000568095 FHL2Q14192 279 aa3.86□□□□□ -1.79
LINC01541-202ENST00000568095 SS18Q15532 418 aa3.86□□□□□ -1.79
LINC01541-202ENST00000568095 LY6EQ16553 131 aa3.86□□□□□ -1.79
LINC01541-202ENST00000568095 DSCR8Q96T75 97 aa3.86□□□□□ -1.79
LINC01541-202ENST00000568095 SPINK13Q1W4C9 94 aa3.86□□□□□ -1.79
LINC01541-202ENST00000568095 LINC00337Q8N6G1 96 aa3.86□□□□□ -1.79
LINC01541-202ENST00000568095 Q9HAA7 133 aa3.86□□□□□ -1.79
LINC01541-202ENST00000568095 IGKV3-7A0A075B6H7 116 aa3.86□□□□□ -1.79
LINC01541-202ENST00000568095 A0A087WYN8 130 aa3.86□□□□□ -1.79
LINC01541-202ENST00000568095 DNAJC9-AS1A6NH13 148 aa3.86□□□□□ -1.79
LINC01541-202ENST00000568095 H0YGX0 51 aa3.86□□□□□ -1.79
LINC01541-202ENST00000568095 BCE1O60756 84 aa3.86□□□□□ -1.79
LINC01541-202ENST00000568095 DNAL4O96015 105 aa3.86□□□□□ -1.79
LINC01541-202ENST00000568095 IGHV3-11P01762 117 aa3.86□□□□□ -1.79
LINC01541-202ENST00000568095 ATP5EP2Q5VTU8 51 aa3.86□□□□□ -1.79
LINC01541-202ENST00000568095 TRBV10-3A0A0K0K1G6 114 aa3.85□□□□□ -1.79
LINC01541-202ENST00000568095 RNASE1P07998 156 aaKnown RBP3.85□□□□□ -1.79
LINC01541-202ENST00000568095 SNRPD3P62318 126 aaKnown RBP3.85□□□□□ -1.79
LINC01541-202ENST00000568095 C10orf99Q6UWK7 81 aa3.85□□□□□ -1.79
LINC01541-202ENST00000568095 C16orf95Q9H693 158 aa3.85□□□□□ -1.79
LINC01541-202ENST00000568095 C14orf132Q9NPU4 83 aa3.85□□□□□ -1.79
LINC01541-202ENST00000568095 CCDC168Q8NDH2 2452 aa3.85□□□□□ -1.79
LINC01541-202ENST00000568095 A0A087WVE0 104 aa3.85□□□□□ -1.79
LINC01541-202ENST00000568095 IGKV3D-7A0A0C4DH55 119 aa3.85□□□□□ -1.79
LINC01541-202ENST00000568095 LY6G6DO95868 133 aa3.85□□□□□ -1.79
LINC01541-202ENST00000568095 CCKP06307 115 aa3.85□□□□□ -1.79
LINC01541-202ENST00000568095 SYNJ2BPP57105 145 aa3.85□□□□□ -1.79
LINC01541-202ENST00000568095 SMIM11BQ8TCY0 68 aa3.85□□□□□ -1.79
LINC01541-202ENST00000568095 SMR3AQ99954 134 aa3.85□□□□□ -1.79
LINC01541-202ENST00000568095 ACANP16112 2415 aa3.84□□□□□ -1.79
LINC01541-202ENST00000568095 C11orf72Q8NBR9 251 aa3.84□□□□□ -1.79
LINC01541-202ENST00000568095 IGHV3-73A0A0B4J1V6 119 aa3.84□□□□□ -1.79
LINC01541-202ENST00000568095 HRCT1Q6UXD1 115 aa3.84□□□□□ -1.79
LINC01541-202ENST00000568095 HILS1P60008 231 aa3.84□□□□□ -1.8
LINC01541-202ENST00000568095 TLN2Q9Y4G6 2542 aa3.83□□□□□ -1.8
LINC01541-202ENST00000568095 CYSRT1A8MQ03 144 aa3.83□□□□□ -1.8
LINC01541-202ENST00000568095 CRPP02741 224 aa3.83□□□□□ -1.8
LINC01541-202ENST00000568095 CDC42SE2Q9NRR3 84 aa3.83□□□□□ -1.8
LINC01541-202ENST00000568095 S100A7L2Q5SY68 101 aa3.83□□□□□ -1.8
LINC01541-202ENST00000568095 FAM236DA0A1B0GTK5 79 aa3.82□□□□□ -1.8
LINC01541-202ENST00000568095 RBMY1BA6NDE4 496 aaKnown RBP3.82□□□□□ -1.8
LINC01541-202ENST00000568095 RBMY1EA6NEQ0 496 aaKnown RBP3.82□□□□□ -1.8
LINC01541-202ENST00000568095 IGKV3-20P01619 116 aa3.82□□□□□ -1.8
LINC01541-202ENST00000568095 RBMY1DP0C7P1 496 aaKnown RBP3.82□□□□□ -1.8
LINC01541-202ENST00000568095 FAM236CP0DP71 79 aa3.82□□□□□ -1.8
LINC01541-202ENST00000568095 HOXD3P31249 432 aaPredicted RBP3.82□□□□□ -1.8
LINC01541-202ENST00000568095 SND1-IT1Q9HBX3 110 aa3.82□□□□□ -1.8
LINC01541-202ENST00000568095 SERP1Q9Y6X1 66 aa3.82□□□□□ -1.8
LINC01541-202ENST00000568095 SETXQ7Z333 2677 aaKnown RBP3.82□□□□□ -1.8
LINC01541-202ENST00000568095 NIPBLQ6KC79 2804 aaeCLIP3.82□□□□□ -1.8
LINC01541-202ENST00000568095 IGHV3-38A0A0C4DH36 116 aa3.82□□□□□ -1.8
LINC01541-202ENST00000568095 H7BZZ5 65 aa3.82□□□□□ -1.8
LINC01541-202ENST00000568095 NTM-AS1Q6ZSK4 140 aa3.82□□□□□ -1.8
LINC01541-202ENST00000568095 C11orf45Q8TAV5 145 aa3.82□□□□□ -1.8
LINC01541-202ENST00000568095 PRO0628Q9UI54 55 aa3.82□□□□□ -1.8
LINC01541-202ENST00000568095 FN1P02751 2386 aaKnown RBP3.82□□□□□ -1.8
LINC01541-202ENST00000568095 NCR3O14931 201 aa3.81□□□□□ -1.8
LINC01541-202ENST00000568095 UBE2E2Q96LR5 201 aa3.81□□□□□ -1.8
LINC01541-202ENST00000568095 SONP18583 2426 aaKnown RBP3.81□□□□□ -1.8
LINC01541-202ENST00000568095 KNCNA6PVL3 124 aa3.81□□□□□ -1.8
LINC01541-202ENST00000568095 XCL1P47992 114 aa3.81□□□□□ -1.8
LINC01541-202ENST00000568095 CCL18P55774 89 aa3.81□□□□□ -1.8
LINC01541-202ENST00000568095 KLKP1Q107X0 134 aa3.81□□□□□ -1.8
LINC01541-202ENST00000568095 MIR7-3HGQ8N6C7 128 aa3.81□□□□□ -1.8
LINC01541-202ENST00000568095 XCL2Q9UBD3 114 aa3.81□□□□□ -1.8
LINC01541-202ENST00000568095 A0A0U1RQV1 116 aa3.81□□□□□ -1.8
LINC01541-202ENST00000568095 JMJD7-PLA2G4BH0Y9G9 81 aa3.81□□□□□ -1.8
LINC01541-202ENST00000568095 C18orf65Q6ZTR6 163 aa3.81□□□□□ -1.8
LINC01541-202ENST00000568095 C4orf3Q8WVX3 66 aa3.81□□□□□ -1.8
LINC01541-202ENST00000568095 TENM1Q9UKZ4 2725 aa3.81□□□□□ -1.8
LINC01541-202ENST00000568095 TRBV10-1A0A0K0K1A3 114 aa3.8□□□□□ -1.8
LINC01541-202ENST00000568095 IBA57-AS1B1ANH7 110 aa3.8□□□□□ -1.8
LINC01541-202ENST00000568095 LECT2O14960 151 aa3.8□□□□□ -1.8
LINC01541-202ENST00000568095 PFN2P35080 140 aa3.8□□□□□ -1.8
LINC01541-202ENST00000568095 KRTAP10-3P60369 221 aa3.8□□□□□ -1.8
LINC01541-202ENST00000568095 COX7B2Q8TF08 81 aa3.8□□□□□ -1.8
LINC01541-202ENST00000568095 ORMDL1Q9P0S3 153 aa3.8□□□□□ -1.8
LINC01541-202ENST00000568095 TRBV6-4A0A1B0GX49 114 aa3.8□□□□□ -1.8
LINC01541-202ENST00000568095 K7EQD1 137 aa3.8□□□□□ -1.8
LINC01541-202ENST00000568095 C1orf195Q5TG92 126 aa3.8□□□□□ -1.8
LINC01541-202ENST00000568095 LINC00336Q6ZUF6 198 aa3.8□□□□□ -1.8
LINC01541-202ENST00000568095 LINC01006Q8NI28 216 aa3.8□□□□□ -1.8
LINC01541-202ENST00000568095 VWFP04275 2813 aa3.8□□□□□ -1.8
LINC01541-202ENST00000568095 FBN1P35555 2871 aaKnown RBP3.8□□□□□ -1.8
LINC01541-202ENST00000568095 TRAV7A0A075B6U4 112 aa3.79□□□□□ -1.8
LINC01541-202ENST00000568095 PRM2P04554 102 aa3.79□□□□□ -1.8
LINC01541-202ENST00000568095 TMEM243Q9BU79 118 aa3.79□□□□□ -1.8
LINC01541-202ENST00000568095 INAFM1C9JVW0 142 aa3.79□□□□□ -1.8
LINC01541-202ENST00000568095 NANOS2P60321 138 aaKnown RBP3.79□□□□□ -1.8
LINC01541-202ENST00000568095 RPL36AP83881 106 aaKnown RBP3.79□□□□□ -1.8
LINC01541-202ENST00000568095 FP248Q71RG6 208 aaPredicted RBP3.79□□□□□ -1.8
LINC01541-202ENST00000568095 FAM19A1Q7Z5A9 133 aa3.79□□□□□ -1.8
LINC01541-202ENST00000568095 RPL36ALQ969Q0 106 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms