RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 C9orf118A6NHY6 69 aa8.39□□□□□ -1.07
SHMT2-230ENST00000557427 DNAH10OSP0CZ25 163 aa8.39□□□□□ -1.07
SHMT2-230ENST00000557427 SMIM13P0DJ93 91 aa8.39□□□□□ -1.07
SHMT2-230ENST00000557427 AMMECR1LQ6DCA0 310 aa8.39□□□□□ -1.07
SHMT2-230ENST00000557427 WFDC10BQ8IUB3 73 aa8.39□□□□□ -1.07
SHMT2-230ENST00000557427 TMEM101Q96IK0 257 aa8.39□□□□□ -1.07
SHMT2-230ENST00000557427 GEMIN7Q9H840 131 aaKnown RBP8.39□□□□□ -1.07
SHMT2-230ENST00000557427 CDC42SE2Q9NRR3 84 aa8.39□□□□□ -1.07
SHMT2-230ENST00000557427 FAT3Q8TDW7 4589 aa8.38□□□□□ -1.07
SHMT2-230ENST00000557427 PTTG1IPP53801 180 aa8.38□□□□□ -1.07
SHMT2-230ENST00000557427 HERVK_113P63121 156 aa8.38□□□□□ -1.07
SHMT2-230ENST00000557427 IGHV3-30-3P0DP02 117 aa8.37□□□□□ -1.07
SHMT2-230ENST00000557427 LINC00242Q5T6M2 205 aa8.37□□□□□ -1.07
SHMT2-230ENST00000557427 SH2D6Q7Z4S9 175 aa8.37□□□□□ -1.07
SHMT2-230ENST00000557427 ATP6V0E2Q8NHE4 81 aa8.37□□□□□ -1.07
SHMT2-230ENST00000557427 A0A1B0GWB2 263 aa8.36□□□□□ -1.07
SHMT2-230ENST00000557427 UBE2V1Q13404 147 aa8.36□□□□□ -1.07
SHMT2-230ENST00000557427 A0A087WTM6 91 aa8.35□□□□□ -1.07
SHMT2-230ENST00000557427 TMEM238LA0A1B0GVL6 79 aa8.35□□□□□ -1.07
SHMT2-230ENST00000557427 A6NJY4 79 aa8.35□□□□□ -1.07
SHMT2-230ENST00000557427 K7EP13 123 aa8.35□□□□□ -1.07
SHMT2-230ENST00000557427 SRSF9Q13242 221 aaKnown RBP eCLIP8.35□□□□□ -1.07
SHMT2-230ENST00000557427 VAMP3Q15836 100 aa8.35□□□□□ -1.07
SHMT2-230ENST00000557427 NHP2Q9NX24 153 aaKnown RBP8.35□□□□□ -1.07
SHMT2-230ENST00000557427 CDKN2A-AS1Q9UH64 79 aa8.35□□□□□ -1.07
SHMT2-230ENST00000557427 DNAH8Q96JB1 4490 aa8.35□□□□□ -1.07
SHMT2-230ENST00000557427 IGHV3-64A0A075B6Q5 118 aa8.34□□□□□ -1.07
SHMT2-230ENST00000557427 TRAV8-3A0A0A6YYJ7 113 aa8.34□□□□□ -1.07
SHMT2-230ENST00000557427 GAGE6Q13070 117 aa8.34□□□□□ -1.07
SHMT2-230ENST00000557427 CHCHD5Q9BSY4 110 aa8.34□□□□□ -1.07
SHMT2-230ENST00000557427 IGLV5-39A0A0G2JS06 123 aa8.33□□□□□ -1.08
SHMT2-230ENST00000557427 A0A0J9YXY3 114 aa8.33□□□□□ -1.08
SHMT2-230ENST00000557427 TMEM238C9JI98 176 aa8.33□□□□□ -1.08
SHMT2-230ENST00000557427 IGHV3-30P01768 117 aa8.33□□□□□ -1.08
SHMT2-230ENST00000557427 SPINK8P0C7L1 97 aa8.33□□□□□ -1.08
SHMT2-230ENST00000557427 IGHV3-30-5P0DP03 117 aa8.33□□□□□ -1.08
SHMT2-230ENST00000557427 COX6A2Q02221 97 aa8.33□□□□□ -1.08
SHMT2-230ENST00000557427 C10orf126Q8N4M7 172 aa8.33□□□□□ -1.08
SHMT2-230ENST00000557427 RAB37Q96AX2 223 aa8.33□□□□□ -1.08
SHMT2-230ENST00000557427 FAM30AQ9NZY2 134 aa8.33□□□□□ -1.08
SHMT2-230ENST00000557427 LRP2P98164 4655 aa8.33□□□□□ -1.08
SHMT2-230ENST00000557427 TRAV13-1A0A0B4J241 112 aa8.32□□□□□ -1.08
SHMT2-230ENST00000557427 H3BUT2 72 aa8.32□□□□□ -1.08
SHMT2-230ENST00000557427 IGHV3-33P01772 117 aa8.32□□□□□ -1.08
SHMT2-230ENST00000557427 NDUFA12Q9UI09 145 aa8.32□□□□□ -1.08
SHMT2-230ENST00000557427 A0A1B0GUV1 79 aa8.31□□□□□ -1.08
SHMT2-230ENST00000557427 A0A1W2PPM0 123 aa8.31□□□□□ -1.08
SHMT2-230ENST00000557427 K7ERJ3 54 aa8.31□□□□□ -1.08
SHMT2-230ENST00000557427 NDUFA1O15239 70 aa8.31□□□□□ -1.08
SHMT2-230ENST00000557427 CCL25O15444 150 aa8.31□□□□□ -1.08
SHMT2-230ENST00000557427 TIMM17BO60830 172 aa8.31□□□□□ -1.08
SHMT2-230ENST00000557427 LELP1Q5T871 98 aa8.31□□□□□ -1.08
SHMT2-230ENST00000557427 IGLV4-60A0A075B6I1 120 aa8.3□□□□□ -1.08
SHMT2-230ENST00000557427 SMIM1B2RUZ4 78 aa8.3□□□□□ -1.08
SHMT2-230ENST00000557427 PLA2G1BP04054 148 aaKnown RBP8.3□□□□□ -1.08
SHMT2-230ENST00000557427 GTF2H5Q6ZYL4 71 aa8.3□□□□□ -1.08
SHMT2-230ENST00000557427 LITAFQ99732 161 aa8.29□□□□□ -1.08
SHMT2-230ENST00000557427 SPANXDQ9BXN6 97 aa8.29□□□□□ -1.08
SHMT2-230ENST00000557427 Q9HAA7 133 aa8.29□□□□□ -1.08
SHMT2-230ENST00000557427 SPANXCQ9NY87 97 aa8.29□□□□□ -1.08
SHMT2-230ENST00000557427 GAGE10A6NGK3 116 aa8.28□□□□□ -1.08
SHMT2-230ENST00000557427 K7EP34 96 aa8.28□□□□□ -1.08
SHMT2-230ENST00000557427 OXTP01178 125 aa8.28□□□□□ -1.08
SHMT2-230ENST00000557427 FABP2P12104 132 aa8.28□□□□□ -1.08
SHMT2-230ENST00000557427 KRTAP10-4P60372 401 aaPredicted RBP8.28□□□□□ -1.08
SHMT2-230ENST00000557427 LINC01556Q5JQF7 62 aa8.28□□□□□ -1.08
SHMT2-230ENST00000557427 Q8N3U1 123 aa8.28□□□□□ -1.08
SHMT2-230ENST00000557427 IBA57-AS1B1ANH7 110 aa8.27□□□□□ -1.09
SHMT2-230ENST00000557427 PSCAO43653 123 aa8.27□□□□□ -1.09
SHMT2-230ENST00000557427 RBX1P62877 108 aa8.27□□□□□ -1.09
SHMT2-230ENST00000557427 RPL24P83731 157 aaKnown RBP8.27□□□□□ -1.09
SHMT2-230ENST00000557427 LINC00528Q8N1L1 170 aa8.27□□□□□ -1.09
SHMT2-230ENST00000557427 NAA38Q9BRA0 125 aaKnown RBP8.27□□□□□ -1.09
SHMT2-230ENST00000557427 IGHV3OR16-9A0A0B4J2B5 98 aa8.26□□□□□ -1.09
SHMT2-230ENST00000557427 LINC00959A0A1B0GUT2 108 aa8.26□□□□□ -1.09
SHMT2-230ENST00000557427 MUSTN1Q8IVN3 82 aa8.26□□□□□ -1.09
SHMT2-230ENST00000557427 SPCS1Q9Y6A9 102 aa8.26□□□□□ -1.09
SHMT2-230ENST00000557427 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.25□□□□□ -1.09
SHMT2-230ENST00000557427 A0A0B4J2C4 111 aa8.25□□□□□ -1.09
SHMT2-230ENST00000557427 TMEM262E9PQX1 116 aa8.25□□□□□ -1.09
SHMT2-230ENST00000557427 IFITM1P13164 125 aa8.25□□□□□ -1.09
SHMT2-230ENST00000557427 HERV-K104P63124 156 aa8.25□□□□□ -1.09
SHMT2-230ENST00000557427 SS18Q15532 418 aa8.25□□□□□ -1.09
SHMT2-230ENST00000557427 MIAQ16674 131 aa8.25□□□□□ -1.09
SHMT2-230ENST00000557427 LINC01561Q8N1V8 128 aa8.25□□□□□ -1.09
SHMT2-230ENST00000557427 A0A087WZ39 114 aa8.24□□□□□ -1.09
SHMT2-230ENST00000557427 A4D1N5 150 aa8.24□□□□□ -1.09
SHMT2-230ENST00000557427 APOMO95445 188 aa8.24□□□□□ -1.09
SHMT2-230ENST00000557427 CFC1BP0CG36 223 aa8.24□□□□□ -1.09
SHMT2-230ENST00000557427 CFC1P0CG37 223 aa8.24□□□□□ -1.09
SHMT2-230ENST00000557427 CIRBPQ14011 172 aaKnown RBP8.24□□□□□ -1.09
SHMT2-230ENST00000557427 ZNF625Q96I27 306 aaPredicted RBP8.24□□□□□ -1.09
SHMT2-230ENST00000557427 IGLV5-52A0A0A0MRZ9 124 aa8.23□□□□□ -1.09
SHMT2-230ENST00000557427 ADAMTSL4-AS1Q5T5F5 129 aa8.23□□□□□ -1.09
SHMT2-230ENST00000557427 COX7B2Q8TF08 81 aa8.23□□□□□ -1.09
SHMT2-230ENST00000557427 PPDPFQ9H3Y8 114 aa8.23□□□□□ -1.09
SHMT2-230ENST00000557427 PRO1854Q9UHT4 67 aa8.23□□□□□ -1.09
SHMT2-230ENST00000557427 PKHD1L1Q86WI1 4243 aa8.22□□□□□ -1.09
SHMT2-230ENST00000557427 IGKV3OR2-268A0A0C4DH90 116 aa8.22□□□□□ -1.09
SHMT2-230ENST00000557427 TSPAN13O95857 204 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms