RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 SPANXA1Q9NS26 97 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 FKBP11Q9NYL4 201 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 COMMD3Q9UBI1 195 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 LY96Q9Y6Y9 160 aa1.94□□□□□ -2.1
PABPN1-204ENST00000554062 C3orf85A0A1B0GTC6 90 aa1.93□□□□□ -2.1
PABPN1-204ENST00000554062 DHFRP00374 187 aa1.93□□□□□ -2.1
PABPN1-204ENST00000554062 TRGC2P03986 189 aa1.93□□□□□ -2.1
PABPN1-204ENST00000554062 FXYD4P59646 89 aa1.93□□□□□ -2.1
PABPN1-204ENST00000554062 KRTAP12-1P59990 96 aa1.93□□□□□ -2.1
PABPN1-204ENST00000554062 RAB4BP61018 213 aa1.93□□□□□ -2.1
PABPN1-204ENST00000554062 LSM3P62310 102 aaKnown RBP1.93□□□□□ -2.1
PABPN1-204ENST00000554062 PDE6HQ13956 83 aa1.93□□□□□ -2.1
PABPN1-204ENST00000554062 TOMM20LQ6UXN7 152 aa1.93□□□□□ -2.1
PABPN1-204ENST00000554062 SNX29P2Q8IUI4 249 aa1.93□□□□□ -2.1
PABPN1-204ENST00000554062 WFDC10AQ9H1F0 79 aa1.93□□□□□ -2.1
PABPN1-204ENST00000554062 NAA60Q9H7X0 242 aa1.93□□□□□ -2.1
PABPN1-204ENST00000554062 LAMTOR2Q9Y2Q5 125 aa1.93□□□□□ -2.1
PABPN1-204ENST00000554062 TRAV12-1A0A0B4J245 112 aa1.92□□□□□ -2.1
PABPN1-204ENST00000554062 SMIM31A0A1B0GVY4 71 aa1.92□□□□□ -2.1
PABPN1-204ENST00000554062 OR2T8A6NH00 312 aa1.92□□□□□ -2.1
PABPN1-204ENST00000554062 TMEM256-PLSCR3K7ERE1 68 aa1.92□□□□□ -2.1
PABPN1-204ENST00000554062 CORTO00230 105 aa1.92□□□□□ -2.1
PABPN1-204ENST00000554062 TIMM17BO60830 172 aa1.92□□□□□ -2.1
PABPN1-204ENST00000554062 OR10J4P0C629 311 aa1.92□□□□□ -2.1
PABPN1-204ENST00000554062 AKAIN1P0CW23 69 aa1.92□□□□□ -2.1
PABPN1-204ENST00000554062 KRTAP12-3P60328 96 aa1.92□□□□□ -2.1
PABPN1-204ENST00000554062 TMEM128Q5BJH2 165 aa1.92□□□□□ -2.1
PABPN1-204ENST00000554062 RNASE10Q5GAN6 216 aaKnown RBP1.92□□□□□ -2.1
PABPN1-204ENST00000554062 DEFB121Q5J5C9 76 aa1.92□□□□□ -2.1
PABPN1-204ENST00000554062 RHPN1-AS1Q9BWJ2 59 aa1.92□□□□□ -2.1
PABPN1-204ENST00000554062 CACFD1Q9UGQ2 172 aa1.92□□□□□ -2.1
PABPN1-204ENST00000554062 TRAV1-1A0A0B4J248 108 aa1.91□□□□□ -2.1
PABPN1-204ENST00000554062 C17orf112F2Z3M2 114 aa1.91□□□□□ -2.1
PABPN1-204ENST00000554062 SNAPC5O75971 98 aa1.91□□□□□ -2.1
PABPN1-204ENST00000554062 NDUFB6O95139 128 aa1.91□□□□□ -2.1
PABPN1-204ENST00000554062 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
PABPN1-204ENST00000554062 LCE1BQ5T7P3 118 aa1.91□□□□□ -2.1
PABPN1-204ENST00000554062 TMEM14EPQ6UXP3 125 aa1.91□□□□□ -2.1
PABPN1-204ENST00000554062 TMEM254Q8TBM7 123 aa1.91□□□□□ -2.1
PABPN1-204ENST00000554062 SNURFQ9Y675 71 aa1.91□□□□□ -2.1
PABPN1-204ENST00000554062 U3KQ87 197 aa1.91□□□□□ -2.1
PABPN1-204ENST00000554062 LRP2P98164 4655 aa1.9□□□□□ -2.1
PABPN1-204ENST00000554062 TRAV30A0A087WSZ9 112 aa1.9□□□□□ -2.11
PABPN1-204ENST00000554062 C9orf170A2RU37 121 aa1.9□□□□□ -2.11
PABPN1-204ENST00000554062 TSTD3H0UI37 97 aa1.9□□□□□ -2.11
PABPN1-204ENST00000554062 HYPMO75409 117 aa1.9□□□□□ -2.11
PABPN1-204ENST00000554062 CST7O76096 145 aa1.9□□□□□ -2.11
PABPN1-204ENST00000554062 SFT2D2O95562 160 aa1.9□□□□□ -2.11
PABPN1-204ENST00000554062 SLC25A4P12235 298 aa1.9□□□□□ -2.11
PABPN1-204ENST00000554062 SMCO1Q147U7 214 aa1.9□□□□□ -2.11
PABPN1-204ENST00000554062 C2orf82Q6UX34 121 aa1.9□□□□□ -2.11
PABPN1-204ENST00000554062 OR2T35Q8NGX2 323 aa1.9□□□□□ -2.11
PABPN1-204ENST00000554062 ZNF625Q96I27 306 aaPredicted RBP1.9□□□□□ -2.11
PABPN1-204ENST00000554062 TRGV9Q99603 122 aa1.9□□□□□ -2.11
PABPN1-204ENST00000554062 BATF3Q9NR55 127 aa1.9□□□□□ -2.11
PABPN1-204ENST00000554062 COPZ2Q9P299 210 aa1.9□□□□□ -2.11
PABPN1-204ENST00000554062 SCP2D1Q9UJQ7 156 aa1.9□□□□□ -2.11
PABPN1-204ENST00000554062 PIGBOS1A0A0B4J2F0 54 aa1.89□□□□□ -2.11
PABPN1-204ENST00000554062 LOC105371267A0A1B0GV96 52 aa1.89□□□□□ -2.11
PABPN1-204ENST00000554062 NAP1L6A6NFF2 107 aa1.89□□□□□ -2.11
PABPN1-204ENST00000554062 GNG7O60262 68 aa1.89□□□□□ -2.11
PABPN1-204ENST00000554062 HIST1H2BKO60814 126 aa1.89□□□□□ -2.11
PABPN1-204ENST00000554062 HIST1H2BJP06899 126 aa1.89□□□□□ -2.11
PABPN1-204ENST00000554062 IL7P13232 177 aa1.89□□□□□ -2.11
PABPN1-204ENST00000554062 HLA-DRB4P13762 266 aa1.89□□□□□ -2.11
PABPN1-204ENST00000554062 S100GP29377 79 aa1.89□□□□□ -2.11
PABPN1-204ENST00000554062 SPINK9Q5DT21 86 aa1.89□□□□□ -2.11
PABPN1-204ENST00000554062 GDF5OSQ5U4N7 250 aa1.89□□□□□ -2.11
PABPN1-204ENST00000554062 PATE2Q6UY27 113 aa1.89□□□□□ -2.11
PABPN1-204ENST00000554062 SOSTDC1Q6X4U4 206 aa1.89□□□□□ -2.11
PABPN1-204ENST00000554062 PHF5AQ7RTV0 110 aaKnown RBP1.89□□□□□ -2.11
PABPN1-204ENST00000554062 DYNLRB2Q8TF09 96 aa1.89□□□□□ -2.11
PABPN1-204ENST00000554062 SPANXCQ9NY87 97 aa1.89□□□□□ -2.11
PABPN1-204ENST00000554062 APLNQ9ULZ1 77 aa1.89□□□□□ -2.11
PABPN1-204ENST00000554062 HSPB11Q9Y547 144 aa1.89□□□□□ -2.11
PABPN1-204ENST00000554062 HLA-DRB4X5D2U9 266 aa1.89□□□□□ -2.11
PABPN1-204ENST00000554062 SRRM2Q9UQ35 2752 aaKnown RBP1.89□□□□□ -2.11
PABPN1-204ENST00000554062 A0A1W2PRE2 83 aa1.88□□□□□ -2.11
PABPN1-204ENST00000554062 FAM25AB3EWG3 89 aa1.88□□□□□ -2.11
PABPN1-204ENST00000554062 FAM25CB3EWG5 89 aa1.88□□□□□ -2.11
PABPN1-204ENST00000554062 FAM25GB3EWG6 89 aa1.88□□□□□ -2.11
PABPN1-204ENST00000554062 CFDP00746 253 aaPredicted RBP1.88□□□□□ -2.11
PABPN1-204ENST00000554062 IFNA17P01571 189 aa1.88□□□□□ -2.11
PABPN1-204ENST00000554062 IL5P05113 134 aa1.88□□□□□ -2.11
PABPN1-204ENST00000554062 IGLC2P0DOY2 106 aa1.88□□□□□ -2.11
PABPN1-204ENST00000554062 SNCAP37840 140 aa1.88□□□□□ -2.11
PABPN1-204ENST00000554062 DEFB131AP59861 70 aa1.88□□□□□ -2.11
PABPN1-204ENST00000554062 DEFB135Q30KP9 77 aa1.88□□□□□ -2.11
PABPN1-204ENST00000554062 Q56UQ5 140 aa1.88□□□□□ -2.11
PABPN1-204ENST00000554062 UNQ6190/PRO20217Q6UXQ8 127 aa1.88□□□□□ -2.11
PABPN1-204ENST00000554062 FOXI2Q6ZQN5 318 aa1.88□□□□□ -2.11
PABPN1-204ENST00000554062 ZNF431Q8TF32 576 aaPredicted RBP1.88□□□□□ -2.11
PABPN1-204ENST00000554062 CIB3Q96Q77 187 aaPredicted RBP1.88□□□□□ -2.11
PABPN1-204ENST00000554062 GGACTQ9BVM4 153 aa1.88□□□□□ -2.11
PABPN1-204ENST00000554062 IGKV3D-7A0A0C4DH55 119 aa1.87□□□□□ -2.11
PABPN1-204ENST00000554062 IGKV3OR2-268A0A0C4DH90 116 aa1.87□□□□□ -2.11
PABPN1-204ENST00000554062 NUPR2A6NF83 97 aa1.87□□□□□ -2.11
PABPN1-204ENST00000554062 SNRPGP15A8MWD9 76 aa1.87□□□□□ -2.11
PABPN1-204ENST00000554062 BCL2P10415 239 aa1.87□□□□□ -2.11
PABPN1-204ENST00000554062 FAUP35544 74 aaKnown RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms