RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 INAFM1C9JVW0 142 aa3.64□□□□□ -1.83
ATPAF1-212ENST00000542495 UBE2L6O14933 153 aa3.64□□□□□ -1.83
ATPAF1-212ENST00000542495 SNCGO76070 127 aa3.64□□□□□ -1.83
ATPAF1-212ENST00000542495 GAGE7O76087 117 aa3.64□□□□□ -1.83
ATPAF1-212ENST00000542495 NHLRC4P0CG21 123 aaPredicted RBP3.64□□□□□ -1.83
ATPAF1-212ENST00000542495 GAGE12FP0CL80 117 aa3.64□□□□□ -1.83
ATPAF1-212ENST00000542495 GAGE12GP0CL81 117 aa3.64□□□□□ -1.83
ATPAF1-212ENST00000542495 GAGE12IP0CL82 117 aa3.64□□□□□ -1.83
ATPAF1-212ENST00000542495 GAGE2BQ13066 116 aa3.64□□□□□ -1.83
ATPAF1-212ENST00000542495 FHL2Q14192 279 aa3.64□□□□□ -1.83
ATPAF1-212ENST00000542495 GAGE2EQ4V326 116 aa3.64□□□□□ -1.83
ATPAF1-212ENST00000542495 MEIG1Q5JSS6 88 aa3.64□□□□□ -1.83
ATPAF1-212ENST00000542495 FAM222AQ5U5X8 452 aa3.64□□□□□ -1.83
ATPAF1-212ENST00000542495 GAGE2DQ9UEU5 116 aa3.64□□□□□ -1.83
ATPAF1-212ENST00000542495 ANK3Q12955 4377 aaKnown RBP3.64□□□□□ -1.83
ATPAF1-212ENST00000542495 TRGV2A0A075B6R0 118 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 TRAV26-1A0A087WT03 109 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 TRBV6-8A0A0A6YYG3 113 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 IGHV3OR16-9A0A0B4J2B5 98 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 A0A0U1RRA0 63 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 RPL28P46779 137 aaKnown RBP3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 LINC00612Q8N6U2 182 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 C15orf53Q8NAA6 179 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 COX7B2Q8TF08 81 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 WFDC10AQ9H1F0 79 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 C22orf24Q9Y442 160 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 JMJD1CQ15652 2540 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 FBN3Q75N90 2809 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 IGLV4-60A0A075B6I1 120 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 IGKV2-28A0A075B6P5 120 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 A0A087WZ39 114 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 TRAV13-2A0A0B4J235 113 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 PRYO14603 147 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 IGKV2D-28P01615 120 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 ACYP1P07311 99 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 RPL35AP18077 110 aaKnown RBP3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 NDUFV3P56181 108 aaKnown RBP3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 LCE5AQ5TCM9 118 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 SDIM1Q6ZPB5 146 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 ANAPC13Q9BS18 74 aa3.63□□□□□ -1.83
ATPAF1-212ENST00000542495 TRGV4A0A0C4DH28 118 aa3.62□□□□□ -1.83
ATPAF1-212ENST00000542495 TRBV7-7A0A0K0K1E9 115 aa3.62□□□□□ -1.83
ATPAF1-212ENST00000542495 GAGE6Q13070 117 aa3.62□□□□□ -1.83
ATPAF1-212ENST00000542495 MIR7-3HGQ8N6C7 128 aa3.62□□□□□ -1.83
ATPAF1-212ENST00000542495 LINC00337Q8N6G1 96 aa3.62□□□□□ -1.83
ATPAF1-212ENST00000542495 KIR2DL5BQ8NHK3 375 aa3.62□□□□□ -1.83
ATPAF1-212ENST00000542495 FAM218AQ96MZ4 157 aa3.62□□□□□ -1.83
ATPAF1-212ENST00000542495 KRTAP23-1A1A580 65 aa3.61□□□□□ -1.83
ATPAF1-212ENST00000542495 IBA57-AS1B1ANH7 110 aa3.61□□□□□ -1.83
ATPAF1-212ENST00000542495 SERTAD4-AS1Q5TG53 156 aa3.61□□□□□ -1.83
ATPAF1-212ENST00000542495 TLN2Q9Y4G6 2542 aa3.61□□□□□ -1.83
ATPAF1-212ENST00000542495 FBN1P35555 2871 aaKnown RBP3.61□□□□□ -1.83
ATPAF1-212ENST00000542495 LINC00959A0A1B0GUT2 108 aa3.61□□□□□ -1.83
ATPAF1-212ENST00000542495 A0A1B0GUV1 79 aa3.61□□□□□ -1.83
ATPAF1-212ENST00000542495 CRPP02741 224 aa3.61□□□□□ -1.83
ATPAF1-212ENST00000542495 BAALC-AS2P0C853 105 aa3.61□□□□□ -1.83
ATPAF1-212ENST00000542495 CCL18P55774 89 aa3.61□□□□□ -1.83
ATPAF1-212ENST00000542495 HILS1P60008 231 aa3.61□□□□□ -1.83
ATPAF1-212ENST00000542495 TTC32Q5I0X7 151 aa3.61□□□□□ -1.83
ATPAF1-212ENST00000542495 LINC01561Q8N1V8 128 aa3.61□□□□□ -1.83
ATPAF1-212ENST00000542495 SND1-IT1Q9HBX3 110 aa3.61□□□□□ -1.83
ATPAF1-212ENST00000542495 COL6A5A8TX70 2615 aa3.6□□□□□ -1.83
ATPAF1-212ENST00000542495 SMIM11BQ8TCY0 68 aa3.6□□□□□ -1.83
ATPAF1-212ENST00000542495 CHCHD5Q9BSY4 110 aa3.6□□□□□ -1.83
ATPAF1-212ENST00000542495 IMUPQ9GZP8 106 aa3.6□□□□□ -1.83
ATPAF1-212ENST00000542495 SMIM9A6NGZ8 99 aa3.59□□□□□ -1.83
ATPAF1-212ENST00000542495 H0YGX0 51 aa3.59□□□□□ -1.83
ATPAF1-212ENST00000542495 LINC00158P58513 81 aa3.59□□□□□ -1.83
ATPAF1-212ENST00000542495 KRTAP10-3P60369 221 aa3.59□□□□□ -1.83
ATPAF1-212ENST00000542495 LINC00643Q86TS7 51 aa3.59□□□□□ -1.83
ATPAF1-212ENST00000542495 SMCR5Q8TEV8 140 aa3.59□□□□□ -1.83
ATPAF1-212ENST00000542495 OBSCN-AS1Q96MR7 158 aa3.59□□□□□ -1.83
ATPAF1-212ENST00000542495 TOMM7Q9P0U1 55 aa3.59□□□□□ -1.83
ATPAF1-212ENST00000542495 ATRQ13535 2644 aa3.59□□□□□ -1.83
ATPAF1-212ENST00000542495 IGKV3OR2-268A0A0C4DH90 116 aa3.58□□□□□ -1.84
ATPAF1-212ENST00000542495 USP17L23D6RBM5 183 aa3.58□□□□□ -1.84
ATPAF1-212ENST00000542495 INAFM2P0DMQ5 153 aa3.58□□□□□ -1.84
ATPAF1-212ENST00000542495 C5orf38Q86SI9 138 aa3.58□□□□□ -1.84
ATPAF1-212ENST00000542495 Q8IZM0 81 aa3.58□□□□□ -1.84
ATPAF1-212ENST00000542495 CUBNO60494 3623 aa3.58□□□□□ -1.84
ATPAF1-212ENST00000542495 WNK1Q9H4A3 2382 aa3.58□□□□□ -1.84
ATPAF1-212ENST00000542495 SONP18583 2426 aaKnown RBP3.58□□□□□ -1.84
ATPAF1-212ENST00000542495 A0A087WYN8 130 aa3.58□□□□□ -1.84
ATPAF1-212ENST00000542495 CCDC179H3BU77 68 aa3.58□□□□□ -1.84
ATPAF1-212ENST00000542495 DEFB130BP0DP73 79 aa3.58□□□□□ -1.84
ATPAF1-212ENST00000542495 DEFB130AP0DP74 79 aa3.58□□□□□ -1.84
ATPAF1-212ENST00000542495 WWC2-AS2Q96NR7 200 aa3.58□□□□□ -1.84
ATPAF1-212ENST00000542495 Q9HAA7 133 aa3.58□□□□□ -1.84
ATPAF1-212ENST00000542495 PRO0255Q9UI72 69 aa3.58□□□□□ -1.84
ATPAF1-212ENST00000542495 NOTCH3Q9UM47 2321 aa3.58□□□□□ -1.84
ATPAF1-212ENST00000542495 A0A0A0MQY5 61 aa3.57□□□□□ -1.84
ATPAF1-212ENST00000542495 KIAA0087Q14695 138 aa3.57□□□□□ -1.84
ATPAF1-212ENST00000542495 SS18Q15532 418 aa3.57□□□□□ -1.84
ATPAF1-212ENST00000542495 C6orf226Q5I0X4 101 aa3.57□□□□□ -1.84
ATPAF1-212ENST00000542495 LINC00167Q96N53 147 aa3.57□□□□□ -1.84
ATPAF1-212ENST00000542495 STAB1Q9NY15 2570 aa3.57□□□□□ -1.84
ATPAF1-212ENST00000542495 IGHV4-28A0A0C4DH34 117 aa3.56□□□□□ -1.84
ATPAF1-212ENST00000542495 LYRM9A8MSI8 78 aa3.56□□□□□ -1.84
ATPAF1-212ENST00000542495 PFN2P35080 140 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms