RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	CACNA1C	Q13936	2221 aa		0.45	□□□□□ -2.34
RDX-215	ENST00000533961	RGPD8	O14715	1765 aa	Predicted RBP	0.45	□□□□□ -2.34
RDX-215	ENST00000533961	RGPD5	Q99666	1765 aa		0.45	□□□□□ -2.34
RDX-215	ENST00000533961	PAPPA2	Q9BXP8	1791 aa		0.45	□□□□□ -2.34
RDX-215	ENST00000533961	LRRIQ1	Q96JM4	1722 aa		0.44	□□□□□ -2.34
RDX-215	ENST00000533961	ABCC1	P33527	1531 aa		0.44	□□□□□ -2.34
RDX-215	ENST00000533961	NEXMIF	Q5QGS0	1516 aa		0.44	□□□□□ -2.34
RDX-215	ENST00000533961	TULP4	Q9NRJ4	1543 aa		0.44	□□□□□ -2.34
RDX-215	ENST00000533961	CCDC88B	A6NC98	1476 aa		0.44	□□□□□ -2.34
RDX-215	ENST00000533961	C7orf77	A4D0Y5	90 aa		0.44	□□□□□ -2.34
RDX-215	ENST00000533961		F8WEM9	126 aa		0.44	□□□□□ -2.34
RDX-215	ENST00000533961		H3BQF6	201 aa		0.44	□□□□□ -2.34
RDX-215	ENST00000533961	SPATA8	Q6RVD6	105 aa		0.44	□□□□□ -2.34
RDX-215	ENST00000533961	SFTA2	Q6UW10	78 aa		0.44	□□□□□ -2.34
RDX-215	ENST00000533961	ST20	Q9HBF5	79 aa		0.44	□□□□□ -2.34
RDX-215	ENST00000533961	ABCA8	O94911	1581 aa		0.44	□□□□□ -2.34
RDX-215	ENST00000533961	KNDC1	Q76NI1	1749 aa		0.44	□□□□□ -2.34
RDX-215	ENST00000533961	PKD1L3	Q7Z443	1732 aa		0.44	□□□□□ -2.34
RDX-215	ENST00000533961	ZDBF2	Q9HCK1	2354 aa		0.43	□□□□□ -2.34
RDX-215	ENST00000533961	PPRC1	Q5VV67	1664 aa	Known RBP	0.43	□□□□□ -2.34
RDX-215	ENST00000533961	RGPD2	P0DJD1	1756 aa		0.43	□□□□□ -2.34
RDX-215	ENST00000533961		A0A0D9SG42	100 aa		0.43	□□□□□ -2.34
RDX-215	ENST00000533961	TRBV6-1	A0A0K0K1D8	114 aa		0.43	□□□□□ -2.34
RDX-215	ENST00000533961	KANTR	A0A1W2PQU2	76 aa		0.43	□□□□□ -2.34
RDX-215	ENST00000533961		M0R3E3	92 aa		0.43	□□□□□ -2.34
RDX-215	ENST00000533961	NMS	Q5H8A3	153 aa		0.43	□□□□□ -2.34
RDX-215	ENST00000533961	C10orf113	Q5VZT2	155 aa		0.43	□□□□□ -2.34
RDX-215	ENST00000533961		Q6JHZ5	121 aa		0.43	□□□□□ -2.34
RDX-215	ENST00000533961	LINC00643	Q86TS7	51 aa		0.43	□□□□□ -2.34
RDX-215	ENST00000533961	UBE2DNL	Q8IWF7	75 aa		0.43	□□□□□ -2.34
RDX-215	ENST00000533961	PSENEN	Q9NZ42	101 aa		0.43	□□□□□ -2.34
RDX-215	ENST00000533961	UBE2D4	Q9Y2X8	147 aa		0.43	□□□□□ -2.34
RDX-215	ENST00000533961	KNTC1	P50748	2209 aa		0.43	□□□□□ -2.34
RDX-215	ENST00000533961	SAMD9	Q5K651	1589 aa		0.43	□□□□□ -2.34
RDX-215	ENST00000533961	MDN1	Q9NU22	5596 aa		0.43	□□□□□ -2.34
RDX-215	ENST00000533961	PCLO	Q9Y6V0	5065 aa		0.43	□□□□□ -2.34
RDX-215	ENST00000533961	ANKRD36	A6QL64	1941 aa		0.42	□□□□□ -2.34
RDX-215	ENST00000533961	LTN1	O94822	1766 aa		0.42	□□□□□ -2.34
RDX-215	ENST00000533961	SCN11A	Q9UI33	1791 aa		0.42	□□□□□ -2.34
RDX-215	ENST00000533961	ATP7B	P35670	1465 aa		0.42	□□□□□ -2.34
RDX-215	ENST00000533961	LRRC37A	A6NMS7	1700 aa		0.42	□□□□□ -2.34
RDX-215	ENST00000533961	QSER1	Q2KHR3	1735 aa		0.42	□□□□□ -2.34
RDX-215	ENST00000533961	ANKAR	Q7Z5J8	1434 aa		0.42	□□□□□ -2.34
RDX-215	ENST00000533961		A0A087WVE0	104 aa		0.42	□□□□□ -2.34
RDX-215	ENST00000533961		H0Y9P7	68 aa		0.42	□□□□□ -2.34
RDX-215	ENST00000533961	KMT2D	O14686	5537 aa		0.42	□□□□□ -2.34
RDX-215	ENST00000533961	S100A3	P33764	101 aa		0.42	□□□□□ -2.34
RDX-215	ENST00000533961	ADIRF	Q15847	76 aa		0.42	□□□□□ -2.34
RDX-215	ENST00000533961	SPCS1	Q9Y6A9	102 aa		0.42	□□□□□ -2.34
RDX-215	ENST00000533961	APC	P25054	2843 aa		0.42	□□□□□ -2.34
RDX-215	ENST00000533961	NKTR	P30414	1462 aa	Known RBP	0.41	□□□□□ -2.34
RDX-215	ENST00000533961	NAV3	Q8IVL0	2385 aa		0.41	□□□□□ -2.34
RDX-215	ENST00000533961	ERCC6L2	Q5T890	1561 aa		0.41	□□□□□ -2.34
RDX-215	ENST00000533961	MYMX	A0A1B0GTQ4	84 aa		0.41	□□□□□ -2.34
RDX-215	ENST00000533961		D6R8Y8	96 aa		0.41	□□□□□ -2.34
RDX-215	ENST00000533961	LEPROTL1	O95214	131 aa		0.41	□□□□□ -2.34
RDX-215	ENST00000533961	HAMP	P81172	84 aa		0.41	□□□□□ -2.34
RDX-215	ENST00000533961	WFDC2	Q14508	124 aa		0.41	□□□□□ -2.34
RDX-215	ENST00000533961	DEFB121	Q5J5C9	76 aa		0.41	□□□□□ -2.34
RDX-215	ENST00000533961	MUSTN1	Q8IVN3	82 aa		0.41	□□□□□ -2.34
RDX-215	ENST00000533961	CNFN	Q9BYD5	112 aa		0.41	□□□□□ -2.34
RDX-215	ENST00000533961	MAGI3	Q5TCQ9	1506 aa		0.41	□□□□□ -2.34
RDX-215	ENST00000533961	KIAA0556	O60303	1618 aa		0.41	□□□□□ -2.34
RDX-215	ENST00000533961	PAPPA	Q13219	1627 aa		0.41	□□□□□ -2.34
RDX-215	ENST00000533961	CCDC141	Q6ZP82	1450 aa		0.41	□□□□□ -2.34
RDX-215	ENST00000533961	URB2	Q14146	1524 aa	Known RBP	0.4	□□□□□ -2.35
RDX-215	ENST00000533961		A0A0D9SFI3	127 aa		0.4	□□□□□ -2.35
RDX-215	ENST00000533961	TRBV7-4	A0A0J9YYF1	115 aa		0.4	□□□□□ -2.35
RDX-215	ENST00000533961	IQCF6	A8MYZ5	107 aa		0.4	□□□□□ -2.35
RDX-215	ENST00000533961	IGLC2	P0DOY2	106 aa		0.4	□□□□□ -2.35
RDX-215	ENST00000533961	IGLC3	P0DOY3	106 aa		0.4	□□□□□ -2.35
RDX-215	ENST00000533961	PLGLA	Q15195	96 aa		0.4	□□□□□ -2.35
RDX-215	ENST00000533961	BVES-AS1	Q5T3Y7	98 aa		0.4	□□□□□ -2.35
RDX-215	ENST00000533961	C6orf201	Q7Z4U5	140 aa		0.4	□□□□□ -2.35
RDX-215	ENST00000533961	DEFB123	Q8N688	67 aa		0.4	□□□□□ -2.35
RDX-215	ENST00000533961	FAM103A1	Q9BTL3	118 aa	Known RBP	0.4	□□□□□ -2.35
RDX-215	ENST00000533961	TIAM2	Q8IVF5	1701 aa		0.4	□□□□□ -2.35
RDX-215	ENST00000533961	DNMBP	Q6XZF7	1577 aa		0.4	□□□□□ -2.35
RDX-215	ENST00000533961	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	0.4	□□□□□ -2.35
RDX-215	ENST00000533961	SETBP1	Q9Y6X0	1596 aa		0.4	□□□□□ -2.35
RDX-215	ENST00000533961	KIAA1109	Q2LD37	5005 aa		0.4	□□□□□ -2.35
RDX-215	ENST00000533961	CAD	P27708	2225 aa		0.4	□□□□□ -2.35
RDX-215	ENST00000533961	SLIT1	O75093	1534 aa		0.39	□□□□□ -2.35
RDX-215	ENST00000533961	PIK3C2B	O00750	1634 aa		0.39	□□□□□ -2.35
RDX-215	ENST00000533961	BIVM-ERCC5	R4GMW8	1640 aa		0.39	□□□□□ -2.35
RDX-215	ENST00000533961	POLR1A	O95602	1720 aa	Predicted RBP	0.39	□□□□□ -2.35
RDX-215	ENST00000533961	RGPD1	P0DJD0	1748 aa		0.39	□□□□□ -2.35
RDX-215	ENST00000533961	MYO5C	Q9NQX4	1742 aa		0.39	□□□□□ -2.35
RDX-215	ENST00000533961	CEBPZOS	A8MTT3	80 aa		0.39	□□□□□ -2.35
RDX-215	ENST00000533961		I3L2K1	104 aa		0.39	□□□□□ -2.35
RDX-215	ENST00000533961	SPINK7	P58062	85 aa		0.39	□□□□□ -2.35
RDX-215	ENST00000533961	SSBP3-AS1	Q7Z2R9	100 aa		0.39	□□□□□ -2.35
RDX-215	ENST00000533961	DEFB107A	Q8IZN7	70 aa		0.39	□□□□□ -2.35
RDX-215	ENST00000533961	FDCSP	Q8NFU4	85 aa		0.39	□□□□□ -2.35
RDX-215	ENST00000533961	DNAJC13	O75165	2243 aa		0.39	□□□□□ -2.35
RDX-215	ENST00000533961	MYO7A	Q13402	2215 aa		0.39	□□□□□ -2.35
RDX-215	ENST00000533961	JMJD1C	Q15652	2540 aa		0.39	□□□□□ -2.35
RDX-215	ENST00000533961	ZNF462	Q96JM2	2506 aa		0.39	□□□□□ -2.35
RDX-215	ENST00000533961	ARFGEF2	Q9Y6D5	1785 aa		0.38	□□□□□ -2.35
RDX-215	ENST00000533961	ZC3H13	Q5T200	1668 aa	Known RBP	0.38	□□□□□ -2.35

Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms