RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 CFAP53Q96M91 514 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 LINC01600Q96MT4 127 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 TMEM191AQ9H0A3 160 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 DYNLRB1Q9NP97 96 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 SAR1AQ9NR31 198 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 DNAJC15Q9Y5T4 150 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 LINC01558Q9Y6Z2 57 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 POLR1AO95602 1720 aaPredicted RBP-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 ITSN1Q15811 1721 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 TLN2Q9Y4G6 2542 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 RANBP2P49792 3224 aaKnown RBP-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 REV3LO60673 3130 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 ZFYVE9O95405 1425 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 CLIP1P30622 1438 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 ZNF831Q5JPB2 1677 aa-0.65□□□□□ -2.51
RNU4-49P-201ENST00000516080 SYNJ1O43426 1573 aa-0.66□□□□□ -2.51
RNU4-49P-201ENST00000516080 PLB1Q6P1J6 1458 aa-0.66□□□□□ -2.51
RNU4-49P-201ENST00000516080 PLEKHH2Q8IVE3 1493 aa-0.66□□□□□ -2.51
RNU4-49P-201ENST00000516080 FRYQ5TBA9 3013 aa-0.66□□□□□ -2.51
RNU4-49P-201ENST00000516080 ANKRD30AQ9BXX3 1397 aa-0.66□□□□□ -2.51
RNU4-49P-201ENST00000516080 A0A087WVE0 104 aa-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 A0A1B0GWA3 101 aa-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 HCG22E2RYF7 251 aa-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 M0R129 80 aa-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 NDUFB6O95139 128 aa-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 POLR2HP52434 150 aaKnown RBP-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 RRAS2P62070 204 aaPredicted RBP-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 CCL7P80098 99 aa-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 MRPS25P82663 173 aaKnown RBP-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 REEP5Q00765 189 aa-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 TMEM78Q5T7P6 136 aa-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 PTRHD1Q6GMV3 140 aaKnown RBP-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 TMEM35BQ8NCS4 154 aa-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 MGST2Q99735 147 aa-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 COPZ2Q9P299 210 aa-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 UQCR10Q9UDW1 63 aa-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 LSM2Q9Y333 95 aaKnown RBP-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 EDC4Q6P2E9 1401 aaKnown RBP-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 NCOA3Q9Y6Q9 1424 aa-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 TRANK1O15050 2925 aa-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 C5orf42Q9H799 3197 aa-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 DIP2CQ9Y2E4 1556 aa-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 DNAH9Q9NYC9 4486 aa-0.66□□□□□ -2.52
RNU4-49P-201ENST00000516080 TOGARAM1Q9Y4F4 1720 aa-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 ABCC10Q5T3U5 1492 aa-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 USP32Q8NFA0 1604 aa-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 TMEM2Q9UHN6 1383 aa-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 TRBV20-1A0A075B6N2 111 aa-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 HMGN4O00479 90 aa-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 MT-ND4LP03901 98 aa-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 IGLC1P0CG04 106 aa-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 NMSQ5H8A3 153 aa-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 LELP1Q5T871 98 aa-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 SAMD13Q5VXD3 122 aa-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 MRPL54Q6P161 138 aaKnown RBP-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 MMGT1Q8N4V1 131 aa-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 SPRR4Q96PI1 79 aa-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 LLPHQ9BRT6 129 aaKnown RBP-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 NXT2Q9NPJ8 142 aaKnown RBP-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 UBE2D4Q9Y2X8 147 aa-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 ARL2-SNX15V9GYD0 113 aa-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 ABCC5O15440 1437 aa-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 CDC42BPGQ6DT37 1551 aa-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 SPTBN5Q9NRC6 3674 aaKnown RBP-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 ZNF518AQ6AHZ1 1483 aa-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 IFT140Q96RY7 1462 aa-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 ZFHX3Q15911 3703 aa-0.67□□□□□ -2.52
RNU4-49P-201ENST00000516080 MAPKBP1O60336 1514 aa-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 MAGI3Q5TCQ9 1506 aa-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 EHBP1L1Q8N3D4 1523 aa-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 CLTCQ00610 1675 aaKnown RBP-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 TOPAZ1Q8N9V7 1692 aa-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 ABCA13Q86UQ4 5058 aa-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 CFAP46Q8IYW2 2715 aa-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 LOC100130705A0A1B0GUX0 176 aa-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 SPAARA0A1B0GVQ0 90 aa-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 CEP290O15078 2479 aa-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 PLXNC1O60486 1568 aa-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 S100GP29377 79 aa-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 HIST1H1AQ02539 215 aaPredicted RBP-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 C9orf153Q5TBE3 101 aa-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 TMEM244Q5VVB8 128 aa-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 TRIQKQ629K1 86 aa-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 C6orf201Q7Z4U5 140 aa-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 C5orf38Q86SI9 138 aa-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 FAM223AQ8IWN6 122 aa-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 NALCNQ8IZF0 1738 aa-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 OR9Q1Q8NGQ5 310 aa-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 THEM6Q8WUY1 208 aa-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 LCN9Q8WX39 176 aa-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 PRG4Q92954 1404 aaPredicted RBP-0.68□□□□□ -2.52
RNU4-49P-201ENST00000516080 MYO9AB2RTY4 2548 aa-0.69□□□□□ -2.52
RNU4-49P-201ENST00000516080 TRBV7-7A0A0K0K1E9 115 aa-0.69□□□□□ -2.52
RNU4-49P-201ENST00000516080 A0A1W2PRE2 83 aa-0.69□□□□□ -2.52
RNU4-49P-201ENST00000516080 TMEM238C9JI98 176 aa-0.69□□□□□ -2.52
RNU4-49P-201ENST00000516080 J3QR89 54 aa-0.69□□□□□ -2.52
RNU4-49P-201ENST00000516080 GNGT1P63211 74 aa-0.69□□□□□ -2.52
RNU4-49P-201ENST00000516080 PRLHP81277 87 aa-0.69□□□□□ -2.52
RNU4-49P-201ENST00000516080 Q56UQ5 140 aa-0.69□□□□□ -2.52
RNU4-49P-201ENST00000516080 KCNRGQ8N5I3 272 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms