RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 UBE2BP63146 152 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 SPINK14Q6IE38 97 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 TMEM254Q8TBM7 123 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 HECTD4Q9Y4D8 3996 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 PKD1P98161 4303 aa2.01□□□□□ -2.09
NEDD4-204ENST00000503468 MUC4Q99102 2169 aa2□□□□□ -2.09
NEDD4-204ENST00000503468 TRAV12-3A0A0B4J271 114 aa2□□□□□ -2.09
NEDD4-204ENST00000503468 CLPSL1A2RUU4 121 aa2□□□□□ -2.09
NEDD4-204ENST00000503468 TRBV12-3P01733 135 aa2□□□□□ -2.09
NEDD4-204ENST00000503468 RPL11P62913 178 aaKnown RBP2□□□□□ -2.09
NEDD4-204ENST00000503468 SUMO4Q6EEV6 95 aa2□□□□□ -2.09
NEDD4-204ENST00000503468 RPL39LQ96EH5 51 aaKnown RBP2□□□□□ -2.09
NEDD4-204ENST00000503468 C11orf21Q9P2W6 132 aa2□□□□□ -2.09
NEDD4-204ENST00000503468 TSHBP01222 138 aa2□□□□□ -2.09
NEDD4-204ENST00000503468 CYP4F30PQ9H0H9 118 aa2□□□□□ -2.09
NEDD4-204ENST00000503468 LECT2O14960 151 aa2□□□□□ -2.09
NEDD4-204ENST00000503468 RNASE3P12724 160 aaKnown RBP2□□□□□ -2.09
NEDD4-204ENST00000503468 ASB16-AS1Q495Z4 193 aa2□□□□□ -2.09
NEDD4-204ENST00000503468 CTSZQ9UBR2 303 aa2□□□□□ -2.09
NEDD4-204ENST00000503468 STARD9Q9P2P6 4700 aa2□□□□□ -2.09
NEDD4-204ENST00000503468 IGHV3-21A0A0B4J1V1 117 aa2□□□□□ -2.09
NEDD4-204ENST00000503468 IGHV3-72A0A0B4J1Y9 119 aa2□□□□□ -2.09
NEDD4-204ENST00000503468 A0A0U1RRA0 63 aa2□□□□□ -2.09
NEDD4-204ENST00000503468 FUSP35637 526 aaKnown RBP eCLIP2□□□□□ -2.09
NEDD4-204ENST00000503468 PRR15Q8IV56 129 aa2□□□□□ -2.09
NEDD4-204ENST00000503468 LINC01356Q8N9X3 169 aa2□□□□□ -2.09
NEDD4-204ENST00000503468 IGFL4Q6B9Z1 124 aa2□□□□□ -2.09
NEDD4-204ENST00000503468 DEFB127Q9H1M4 99 aa2□□□□□ -2.09
NEDD4-204ENST00000503468 CDKN2A-AS1Q9UH64 79 aa2□□□□□ -2.09
NEDD4-204ENST00000503468 ZFHX3Q15911 3703 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 LINC01548A6NM66 108 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 CCL21O00585 134 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 PAX4O43316 350 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 IGHV4-38-2P0DP08 117 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 COX7A1P24310 79 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 ELOF1P60002 83 aaKnown RBP1.99□□□□□ -2.09
NEDD4-204ENST00000503468 RPL39P62891 51 aaKnown RBP1.99□□□□□ -2.09
NEDD4-204ENST00000503468 HAMPP81172 84 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 FHL2Q14192 279 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 FAM74A4Q5TZK3 123 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 LIMD2Q9BT23 127 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 TRAV23DV6A0A075B6W5 121 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 LOC110117498A0A087WWA1 95 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 C19orf84I3L1E1 186 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 GAS8-AS1O95177 125 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 CMC4P56277 68 aaPredicted RBP1.99□□□□□ -2.09
NEDD4-204ENST00000503468 C9orf106Q8NAJ2 232 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 PRAC2D3DTV9 90 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 KRTAP26-1Q6PEX3 210 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 NTM-AS1Q6ZSK4 140 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 Q96MF0 132 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 C14orf132Q9NPU4 83 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 MYO15AQ9UKN7 3530 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 DSCR9P59020 149 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 C9orf66Q5T8R8 295 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 LINC01560Q8TB33 94 aa1.99□□□□□ -2.09
NEDD4-204ENST00000503468 TRBV6-4A0A1B0GX49 114 aa1.98□□□□□ -2.09
NEDD4-204ENST00000503468 H3BPC8 53 aa1.98□□□□□ -2.09
NEDD4-204ENST00000503468 CCL24O00175 119 aa1.98□□□□□ -2.09
NEDD4-204ENST00000503468 STHQ8IWL8 128 aa1.98□□□□□ -2.09
NEDD4-204ENST00000503468 MIR7-3HGQ8N6C7 128 aa1.98□□□□□ -2.09
NEDD4-204ENST00000503468 WFDC11Q8NEX6 87 aa1.98□□□□□ -2.09
NEDD4-204ENST00000503468 ZNF625Q96I27 306 aaPredicted RBP1.98□□□□□ -2.09
NEDD4-204ENST00000503468 SRRM2Q9UQ35 2752 aaKnown RBP1.98□□□□□ -2.09
NEDD4-204ENST00000503468 EIF4EBP3O60516 100 aaPredicted RBP1.98□□□□□ -2.09
NEDD4-204ENST00000503468 LPAL2Q16609 132 aa1.98□□□□□ -2.09
NEDD4-204ENST00000503468 ATP11AUNQ6ZP68 121 aa1.98□□□□□ -2.09
NEDD4-204ENST00000503468 A6NDX4 124 aa1.98□□□□□ -2.09
NEDD4-204ENST00000503468 F8WEM9 126 aa1.98□□□□□ -2.09
NEDD4-204ENST00000503468 LINC00482Q8N8I6 264 aa1.98□□□□□ -2.09
NEDD4-204ENST00000503468 SMAD5-AS1Q9Y6J3 95 aa1.98□□□□□ -2.09
NEDD4-204ENST00000503468 F8P00451 2351 aa1.98□□□□□ -2.09
NEDD4-204ENST00000503468 IGHV7-81A0A0B4J1V7 117 aa1.98□□□□□ -2.09
NEDD4-204ENST00000503468 LY6HO94772 140 aa1.98□□□□□ -2.09
NEDD4-204ENST00000503468 GIG44P09565 113 aaPredicted RBP1.98□□□□□ -2.09
NEDD4-204ENST00000503468 LINC00158P58513 81 aa1.98□□□□□ -2.09
NEDD4-204ENST00000503468 KRTAP10-4P60372 401 aaPredicted RBP1.98□□□□□ -2.09
NEDD4-204ENST00000503468 SMIM1B2RUZ4 78 aa1.98□□□□□ -2.09
NEDD4-204ENST00000503468 OXTP01178 125 aa1.98□□□□□ -2.09
NEDD4-204ENST00000503468 SPINK2P20155 84 aa1.98□□□□□ -2.09
NEDD4-204ENST00000503468 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.98□□□□□ -2.09
NEDD4-204ENST00000503468 Q8N3U1 123 aa1.98□□□□□ -2.09
NEDD4-204ENST00000503468 PRYO14603 147 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 NREPQ16612 68 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 ADAMTSL4-AS1Q5T5F5 129 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 FAM19A1Q7Z5A9 133 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 RHPN1-AS1Q9BWJ2 59 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 X6R8D5 127 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 RELNP78509 3460 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 A0A087WVE0 104 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 IGHV3-16A0A0C4DH30 117 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 ECSCRQ19T08 205 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 C6orf223Q8N319 242 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 SMCR5Q8TEV8 140 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 LINC00167Q96N53 147 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 K7EQD1 137 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 UBE2AP49459 152 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 MP68P56378 58 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 Q1T7F1 81 aa1.97□□□□□ -2.09
NEDD4-204ENST00000503468 LINC00242Q5T6M2 205 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms