RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 SH2D1AO60880 128 aa3.54□□□□□ -1.84
SPTA1-209ENST00000498708 ANGP03950 147 aaKnown RBP3.54□□□□□ -1.84
SPTA1-209ENST00000498708 CRIP1P50238 77 aa3.54□□□□□ -1.84
SPTA1-209ENST00000498708 KRTAP10-6P60371 365 aaPredicted RBP3.54□□□□□ -1.84
SPTA1-209ENST00000498708 RPL36AP83881 106 aaKnown RBP3.54□□□□□ -1.84
SPTA1-209ENST00000498708 Q5XG85 94 aa3.54□□□□□ -1.84
SPTA1-209ENST00000498708 ENHOQ6UWT2 76 aa3.54□□□□□ -1.84
SPTA1-209ENST00000498708 Q6ZVH6 145 aa3.54□□□□□ -1.84
SPTA1-209ENST00000498708 NUP35Q8NFH5 326 aa3.54□□□□□ -1.84
SPTA1-209ENST00000498708 ZC2HC1AQ96GY0 325 aa3.54□□□□□ -1.84
SPTA1-209ENST00000498708 PHLDA3Q9Y5J5 127 aa3.54□□□□□ -1.84
SPTA1-209ENST00000498708 MUC17Q685J3 4493 aa3.53□□□□□ -1.84
SPTA1-209ENST00000498708 MUC21A0A0G2JKD1 596 aa3.53□□□□□ -1.84
SPTA1-209ENST00000498708 MUC21A0A140T8X8 626 aa3.53□□□□□ -1.84
SPTA1-209ENST00000498708 PEX7O00628 323 aa3.53□□□□□ -1.84
SPTA1-209ENST00000498708 PRYO14603 147 aa3.53□□□□□ -1.84
SPTA1-209ENST00000498708 CXorf1O96002 111 aa3.53□□□□□ -1.84
SPTA1-209ENST00000498708 MT-ATP8P03928 68 aa3.53□□□□□ -1.84
SPTA1-209ENST00000498708 PRSS1P07477 247 aa3.53□□□□□ -1.84
SPTA1-209ENST00000498708 UBE2D3P61077 147 aa3.53□□□□□ -1.84
SPTA1-209ENST00000498708 UBE2D2P62837 147 aa3.53□□□□□ -1.84
SPTA1-209ENST00000498708 ZNF56Q15929 161 aa3.53□□□□□ -1.84
SPTA1-209ENST00000498708 C14orf177Q52M58 125 aa3.53□□□□□ -1.84
SPTA1-209ENST00000498708 MPV17L2Q567V2 206 aa3.53□□□□□ -1.84
SPTA1-209ENST00000498708 SLC25A34Q6PIV7 304 aa3.53□□□□□ -1.84
SPTA1-209ENST00000498708 Q86TA4 180 aa3.53□□□□□ -1.84
SPTA1-209ENST00000498708 LINC00526Q96FQ7 95 aa3.53□□□□□ -1.84
SPTA1-209ENST00000498708 DPH3Q96FX2 82 aa3.53□□□□□ -1.84
SPTA1-209ENST00000498708 CHCHD5Q9BSY4 110 aa3.53□□□□□ -1.84
SPTA1-209ENST00000498708 EIF5A2Q9GZV4 153 aaKnown RBP3.53□□□□□ -1.84
SPTA1-209ENST00000498708 TMEM167BQ9NRX6 74 aa3.53□□□□□ -1.84
SPTA1-209ENST00000498708 IL36BQ9NZH7 164 aa3.53□□□□□ -1.84
SPTA1-209ENST00000498708 IGLV10-54A0A075B6I4 117 aa3.52□□□□□ -1.85
SPTA1-209ENST00000498708 FAM236DA0A1B0GTK5 79 aa3.52□□□□□ -1.85
SPTA1-209ENST00000498708 OR5AL1P0C617 328 aa3.52□□□□□ -1.85
SPTA1-209ENST00000498708 FAM236CP0DP71 79 aa3.52□□□□□ -1.85
SPTA1-209ENST00000498708 BCL2P10415 239 aa3.52□□□□□ -1.85
SPTA1-209ENST00000498708 CRYGAP11844 174 aa3.52□□□□□ -1.85
SPTA1-209ENST00000498708 NMUP48645 174 aa3.52□□□□□ -1.85
SPTA1-209ENST00000498708 UBE2G1P62253 170 aa3.52□□□□□ -1.85
SPTA1-209ENST00000498708 PMAIP1Q13794 54 aa3.52□□□□□ -1.85
SPTA1-209ENST00000498708 ZNF726P1Q15940 193 aa3.52□□□□□ -1.85
SPTA1-209ENST00000498708 C3orf22Q8N5N4 141 aa3.52□□□□□ -1.85
SPTA1-209ENST00000498708 NEXN-AS1Q8NBZ9 246 aa3.52□□□□□ -1.85
SPTA1-209ENST00000498708 IMUPQ9GZP8 106 aa3.52□□□□□ -1.85
SPTA1-209ENST00000498708 TRBV7-3A0A075B6L6 115 aa3.51□□□□□ -1.85
SPTA1-209ENST00000498708 TRBV6-8A0A0A6YYG3 113 aa3.51□□□□□ -1.85
SPTA1-209ENST00000498708 LOC107984640A0A0U1RRK4 108 aa3.51□□□□□ -1.85
SPTA1-209ENST00000498708 J3QQQ9 107 aa3.51□□□□□ -1.85
SPTA1-209ENST00000498708 SNCGO76070 127 aa3.51□□□□□ -1.85
SPTA1-209ENST00000498708 MT-ND6P03923 174 aa3.51□□□□□ -1.85
SPTA1-209ENST00000498708 SRP19P09132 144 aaKnown RBP3.51□□□□□ -1.85
SPTA1-209ENST00000498708 HERVK_113P63121 156 aa3.51□□□□□ -1.85
SPTA1-209ENST00000498708 RPL18AQ02543 176 aaKnown RBP3.51□□□□□ -1.85
SPTA1-209ENST00000498708 KIAA1644Q3SXP7 199 aa3.51□□□□□ -1.85
SPTA1-209ENST00000498708 RPL7L1Q6DKI1 246 aaKnown RBP3.51□□□□□ -1.85
SPTA1-209ENST00000498708 HRCT1Q6UXD1 115 aa3.51□□□□□ -1.85
SPTA1-209ENST00000498708 C9orf163Q8N9P6 203 aa3.51□□□□□ -1.85
SPTA1-209ENST00000498708 PPDPFLQ8WWR9 84 aa3.51□□□□□ -1.85
SPTA1-209ENST00000498708 CHCHD7Q9BUK0 85 aa3.51□□□□□ -1.85
SPTA1-209ENST00000498708 RNASE7Q9H1E1 156 aaKnown RBP3.51□□□□□ -1.85
SPTA1-209ENST00000498708 TRBV10-1A0A0K0K1A3 114 aa3.5□□□□□ -1.85
SPTA1-209ENST00000498708 CTXND1A0A1B0GTU2 59 aa3.5□□□□□ -1.85
SPTA1-209ENST00000498708 NDUFC2-KCTD14E9PQ53 114 aa3.5□□□□□ -1.85
SPTA1-209ENST00000498708 SYS1-DBNDD2H3BUS1 97 aa3.5□□□□□ -1.85
SPTA1-209ENST00000498708 APOMO95445 188 aa3.5□□□□□ -1.85
SPTA1-209ENST00000498708 CHTF8P0CG12 524 aa3.5□□□□□ -1.85
SPTA1-209ENST00000498708 PFN2P35080 140 aa3.5□□□□□ -1.85
SPTA1-209ENST00000498708 KRTAP10-8P60410 259 aa3.5□□□□□ -1.85
SPTA1-209ENST00000498708 SERF2P84101 59 aa3.5□□□□□ -1.85
SPTA1-209ENST00000498708 PIK3CD-AS1Q5SR53 167 aa3.5□□□□□ -1.85
SPTA1-209ENST00000498708 NTM-AS1Q6ZSK4 140 aa3.5□□□□□ -1.85
SPTA1-209ENST00000498708 MRPL55Q7Z7F7 128 aaKnown RBP3.5□□□□□ -1.85
SPTA1-209ENST00000498708 LINC00269Q8N2A0 174 aa3.5□□□□□ -1.85
SPTA1-209ENST00000498708 LINC01600Q96MT4 127 aa3.5□□□□□ -1.85
SPTA1-209ENST00000498708 NAA38Q9BRA0 125 aaKnown RBP3.5□□□□□ -1.85
SPTA1-209ENST00000498708 DPH3P1Q9H4G8 78 aa3.5□□□□□ -1.85
SPTA1-209ENST00000498708 PKIGQ9Y2B9 76 aa3.5□□□□□ -1.85
SPTA1-209ENST00000498708 TRAV1-1A0A0B4J248 108 aa3.49□□□□□ -1.85
SPTA1-209ENST00000498708 IGKV3OR2-268A0A0C4DH90 116 aa3.49□□□□□ -1.85
SPTA1-209ENST00000498708 hDV102S1A0JD36 115 aa3.49□□□□□ -1.85
SPTA1-209ENST00000498708 ZNF727A8MUV8 499 aa3.49□□□□□ -1.85
SPTA1-209ENST00000498708 H3BUT2 72 aa3.49□□□□□ -1.85
SPTA1-209ENST00000498708 MGPP08493 103 aa3.49□□□□□ -1.85
SPTA1-209ENST00000498708 MIAQ16674 131 aa3.49□□□□□ -1.85
SPTA1-209ENST00000498708 C9orf153Q5TBE3 101 aa3.49□□□□□ -1.85
SPTA1-209ENST00000498708 SPANXN1Q5VSR9 72 aa3.49□□□□□ -1.85
SPTA1-209ENST00000498708 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.49□□□□□ -1.85
SPTA1-209ENST00000498708 SDIM1Q6ZPB5 146 aa3.49□□□□□ -1.85
SPTA1-209ENST00000498708 OR10G8Q8NGN5 311 aa3.49□□□□□ -1.85
SPTA1-209ENST00000498708 MPLKIPQ8TAP9 179 aa3.49□□□□□ -1.85
SPTA1-209ENST00000498708 COPS9Q8WXC6 57 aa3.49□□□□□ -1.85
SPTA1-209ENST00000498708 FMC1Q96HJ9 113 aa3.49□□□□□ -1.85
SPTA1-209ENST00000498708 MANBALQ9NQG1 85 aa3.49□□□□□ -1.85
SPTA1-209ENST00000498708 TRBV25-1A0A075B6N4 114 aa3.48□□□□□ -1.85
SPTA1-209ENST00000498708 A0A087WYN8 130 aa3.48□□□□□ -1.85
SPTA1-209ENST00000498708 TRAV26-2A0A0B4J265 109 aa3.48□□□□□ -1.85
SPTA1-209ENST00000498708 TRBV6-1A0A0K0K1D8 114 aa3.48□□□□□ -1.85
SPTA1-209ENST00000498708 TRBV7-7A0A0K0K1E9 115 aa3.48□□□□□ -1.85
SPTA1-209ENST00000498708 REG3AQ06141 175 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms