RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 SONP18583 2426 aaKnown RBP-0.23□□□□□ -2.45
PHC3-216ENST00000497171 LAMA5O15230 3695 aa-0.23□□□□□ -2.45
PHC3-216ENST00000497171 EHBP1L1Q8N3D4 1523 aa-0.23□□□□□ -2.45
PHC3-216ENST00000497171 AKAP13Q12802 2813 aa-0.23□□□□□ -2.45
PHC3-216ENST00000497171 NRKQ7Z2Y5 1582 aa-0.23□□□□□ -2.45
PHC3-216ENST00000497171 FASNP49327 2511 aaKnown RBP-0.24□□□□□ -2.45
PHC3-216ENST00000497171 MYO18BQ8IUG5 2567 aa-0.24□□□□□ -2.45
PHC3-216ENST00000497171 TACC2O95359 2948 aa-0.24□□□□□ -2.45
PHC3-216ENST00000497171 DEFB123Q8N688 67 aa-0.24□□□□□ -2.45
PHC3-216ENST00000497171 LINC01600Q96MT4 127 aa-0.24□□□□□ -2.45
PHC3-216ENST00000497171 C2orf88Q9BSF0 95 aa-0.24□□□□□ -2.45
PHC3-216ENST00000497171 GAPVD1Q14C86 1478 aa-0.24□□□□□ -2.45
PHC3-216ENST00000497171 TOP2BQ02880 1626 aa-0.24□□□□□ -2.45
PHC3-216ENST00000497171 MYCBP2O75592 4640 aa-0.25□□□□□ -2.45
PHC3-216ENST00000497171 SPTBN4Q9H254 2564 aa-0.25□□□□□ -2.45
PHC3-216ENST00000497171 LINC00959A0A1B0GUT2 108 aa-0.25□□□□□ -2.45
PHC3-216ENST00000497171 SYS1-DBNDD2H3BUS1 97 aa-0.25□□□□□ -2.45
PHC3-216ENST00000497171 UBE2D3P61077 147 aa-0.25□□□□□ -2.45
PHC3-216ENST00000497171 UBE2D2P62837 147 aa-0.25□□□□□ -2.45
PHC3-216ENST00000497171 KRTAP20-2Q3LI61 65 aa-0.25□□□□□ -2.45
PHC3-216ENST00000497171 MAGI1Q96QZ7 1491 aaPredicted RBP-0.25□□□□□ -2.45
PHC3-216ENST00000497171 LPAP08519 4548 aa-0.25□□□□□ -2.45
PHC3-216ENST00000497171 BIRC6Q9NR09 4857 aa-0.26□□□□□ -2.45
PHC3-216ENST00000497171 CHD8Q9HCK8 2581 aa-0.26□□□□□ -2.45
PHC3-216ENST00000497171 SCN7AQ01118 1682 aa-0.26□□□□□ -2.45
PHC3-216ENST00000497171 STARD9Q9P2P6 4700 aa-0.26□□□□□ -2.45
PHC3-216ENST00000497171 PZPP20742 1482 aa-0.26□□□□□ -2.45
PHC3-216ENST00000497171 SPINK4O60575 86 aa-0.26□□□□□ -2.45
PHC3-216ENST00000497171 SPRR2AP35326 72 aa-0.26□□□□□ -2.45
PHC3-216ENST00000497171 KRTDAPP60985 99 aa-0.26□□□□□ -2.45
PHC3-216ENST00000497171 LCN9Q8WX39 176 aa-0.26□□□□□ -2.45
PHC3-216ENST00000497171 USP9YO00507 2555 aaPredicted RBP-0.26□□□□□ -2.45
PHC3-216ENST00000497171 KMT2AQ03164 3969 aa-0.26□□□□□ -2.45
PHC3-216ENST00000497171 HTTP42858 3142 aa-0.27□□□□□ -2.45
PHC3-216ENST00000497171 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.27□□□□□ -2.45
PHC3-216ENST00000497171 ARHGAP5Q13017 1502 aa-0.27□□□□□ -2.45
PHC3-216ENST00000497171 HECTD4Q9Y4D8 3996 aa-0.27□□□□□ -2.45
PHC3-216ENST00000497171 LINC00587B1AMM8 73 aa-0.27□□□□□ -2.45
PHC3-216ENST00000497171 CCDC168Q8NDH2 2452 aa-0.27□□□□□ -2.45
PHC3-216ENST00000497171 MAPKBP1O60336 1514 aa-0.28□□□□□ -2.45
PHC3-216ENST00000497171 TULP4Q9NRJ4 1543 aa-0.28□□□□□ -2.45
PHC3-216ENST00000497171 ITPR2Q14571 2701 aa-0.28□□□□□ -2.45
PHC3-216ENST00000497171 C1orf167Q5SNV9 1468 aa-0.28□□□□□ -2.45
PHC3-216ENST00000497171 NBPF19A0A087WUL8 3843 aa-0.28□□□□□ -2.45
PHC3-216ENST00000497171 CNOT1A5YKK6 2376 aaKnown RBP-0.28□□□□□ -2.45
PHC3-216ENST00000497171 SPTBN1Q01082 2364 aaKnown RBP-0.28□□□□□ -2.45
PHC3-216ENST00000497171 SAA2P0DJI9 122 aaPredicted RBP-0.28□□□□□ -2.45
PHC3-216ENST00000497171 SEC11AP67812 179 aa-0.28□□□□□ -2.45
PHC3-216ENST00000497171 KLK9Q2XQG4 91 aa-0.28□□□□□ -2.45
PHC3-216ENST00000497171 DEFB105AQ8NG35 78 aa-0.28□□□□□ -2.45
PHC3-216ENST00000497171 LRP1BQ9NZR2 4599 aa-0.28□□□□□ -2.45
PHC3-216ENST00000497171 CC2D2AQ9P2K1 1620 aa-0.28□□□□□ -2.45
PHC3-216ENST00000497171 SETBP1Q9Y6X0 1596 aa-0.28□□□□□ -2.45
PHC3-216ENST00000497171 RYR2Q92736 4967 aa-0.28□□□□□ -2.45
PHC3-216ENST00000497171 ADGRL2O95490 1459 aa-0.29□□□□□ -2.46
PHC3-216ENST00000497171 BSNQ9UPA5 3926 aa-0.29□□□□□ -2.46
PHC3-216ENST00000497171 ANKRD11Q6UB99 2663 aaPredicted RBP-0.29□□□□□ -2.46
PHC3-216ENST00000497171 COL6A5A8TX70 2615 aa-0.29□□□□□ -2.46
PHC3-216ENST00000497171 H3BQ15 152 aa-0.29□□□□□ -2.46
PHC3-216ENST00000497171 USMG5Q96IX5 58 aa-0.29□□□□□ -2.46
PHC3-216ENST00000497171 LAMA1P25391 3075 aa-0.29□□□□□ -2.46
PHC3-216ENST00000497171 HECTD1Q9ULT8 2610 aa-0.3□□□□□ -2.46
PHC3-216ENST00000497171 GOLGA4Q13439 2230 aaKnown RBP-0.3□□□□□ -2.46
PHC3-216ENST00000497171 COL12A1Q99715 3063 aa-0.3□□□□□ -2.46
PHC3-216ENST00000497171 DIP2CQ9Y2E4 1556 aa-0.3□□□□□ -2.46
PHC3-216ENST00000497171 hADV29S1A0JD25 119 aa-0.3□□□□□ -2.46
PHC3-216ENST00000497171 COX8AP10176 69 aa-0.3□□□□□ -2.46
PHC3-216ENST00000497171 DEFB112Q30KQ8 113 aa-0.3□□□□□ -2.46
PHC3-216ENST00000497171 VAMP8Q9BV40 100 aa-0.3□□□□□ -2.46
PHC3-216ENST00000497171 CSPG4Q6UVK1 2322 aa-0.3□□□□□ -2.46
PHC3-216ENST00000497171 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.31□□□□□ -2.46
PHC3-216ENST00000497171 FLGP20930 4061 aaPredicted RBP-0.31□□□□□ -2.46
PHC3-216ENST00000497171 C20orf202A1L168 122 aa-0.31□□□□□ -2.46
PHC3-216ENST00000497171 SPRR2EP22531 72 aa-0.31□□□□□ -2.46
PHC3-216ENST00000497171 SPTA1P02549 2419 aa-0.31□□□□□ -2.46
PHC3-216ENST00000497171 SPHKAPQ2M3C7 1700 aa-0.31□□□□□ -2.46
PHC3-216ENST00000497171 NUP188Q5SRE5 1749 aa-0.31□□□□□ -2.46
PHC3-216ENST00000497171 NLRP1Q9C000 1473 aa-0.31□□□□□ -2.46
PHC3-216ENST00000497171 RIF1Q5UIP0 2472 aaKnown RBP-0.31□□□□□ -2.46
PHC3-216ENST00000497171 NIPBLQ6KC79 2804 aaeCLIP-0.32□□□□□ -2.46
PHC3-216ENST00000497171 RNF213Q63HN8 5207 aa-0.32□□□□□ -2.46
PHC3-216ENST00000497171 A0A087WVE0 104 aa-0.32□□□□□ -2.46
PHC3-216ENST00000497171 TMEM262E9PQX1 116 aa-0.32□□□□□ -2.46
PHC3-216ENST00000497171 K7EP34 96 aa-0.32□□□□□ -2.46
PHC3-216ENST00000497171 DEFA5Q01523 94 aa-0.32□□□□□ -2.46
PHC3-216ENST00000497171 HSD52Q0P140 79 aa-0.32□□□□□ -2.46
PHC3-216ENST00000497171 CGREF1Q99674 301 aa-0.32□□□□□ -2.46
PHC3-216ENST00000497171 ALMS1Q8TCU4 4167 aa-0.32□□□□□ -2.46
PHC3-216ENST00000497171 DNAH6Q9C0G6 4158 aa-0.32□□□□□ -2.46
PHC3-216ENST00000497171 ZFHX3Q15911 3703 aa-0.32□□□□□ -2.46
PHC3-216ENST00000497171 PCNX1Q96RV3 2341 aa-0.32□□□□□ -2.46
PHC3-216ENST00000497171 FRYQ5TBA9 3013 aa-0.32□□□□□ -2.46
PHC3-216ENST00000497171 ABCA13Q86UQ4 5058 aa-0.33□□□□□ -2.46
PHC3-216ENST00000497171 MGAM2Q2M2H8 2515 aa-0.33□□□□□ -2.46
PHC3-216ENST00000497171 KIAA0556O60303 1618 aa-0.33□□□□□ -2.46
PHC3-216ENST00000497171 CELSR3Q9NYQ7 3312 aa-0.33□□□□□ -2.46
PHC3-216ENST00000497171 A0A1B0GU69 56 aa-0.33□□□□□ -2.46
PHC3-216ENST00000497171 C7orf77A4D0Y5 90 aa-0.33□□□□□ -2.46
PHC3-216ENST00000497171 MT1HL1P0DM35 61 aa-0.33□□□□□ -2.46
PHC3-216ENST00000497171 APLNQ9ULZ1 77 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms