RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 CACNA1HO95180 2353 aa2.82□□□□□ -1.96
ATG3-207ENST00000494571 SPTA1P02549 2419 aa2.82□□□□□ -1.96
ATG3-207ENST00000494571 LINC01565O15544 149 aa2.82□□□□□ -1.96
ATG3-207ENST00000494571 PSCAO43653 123 aa2.82□□□□□ -1.96
ATG3-207ENST00000494571 LINC00242Q5T6M2 205 aa2.82□□□□□ -1.96
ATG3-207ENST00000494571 Q6ZQT0 140 aa2.82□□□□□ -1.96
ATG3-207ENST00000494571 NTM-AS1Q6ZSK4 140 aa2.82□□□□□ -1.96
ATG3-207ENST00000494571 Q8N814 137 aa2.82□□□□□ -1.96
ATG3-207ENST00000494571 CHD9Q3L8U1 2897 aa2.82□□□□□ -1.96
ATG3-207ENST00000494571 TECTAO75443 2155 aa2.82□□□□□ -1.96
ATG3-207ENST00000494571 SPTBN2O15020 2390 aa2.82□□□□□ -1.96
ATG3-207ENST00000494571 IGHV3OR16-12A0A075B7B8 117 aa2.82□□□□□ -1.96
ATG3-207ENST00000494571 PRM2P04554 102 aa2.82□□□□□ -1.96
ATG3-207ENST00000494571 MED14OSP0DP75 135 aa2.82□□□□□ -1.96
ATG3-207ENST00000494571 VPREB1P12018 145 aa2.82□□□□□ -1.96
ATG3-207ENST00000494571 IGLV3-9A0A075B6K5 115 aa2.81□□□□□ -1.96
ATG3-207ENST00000494571 A6NN06 94 aa2.81□□□□□ -1.96
ATG3-207ENST00000494571 G3V318 75 aa2.81□□□□□ -1.96
ATG3-207ENST00000494571 ATP11AUNQ6ZP68 121 aa2.81□□□□□ -1.96
ATG3-207ENST00000494571 DIRC1Q969H9 104 aa2.81□□□□□ -1.96
ATG3-207ENST00000494571 CHCHD7Q9BUK0 85 aa2.81□□□□□ -1.96
ATG3-207ENST00000494571 DMXL1Q9Y485 3027 aa2.81□□□□□ -1.96
ATG3-207ENST00000494571 COL12A1Q99715 3063 aa2.81□□□□□ -1.96
ATG3-207ENST00000494571 IGLV5-39A0A0G2JS06 123 aa2.81□□□□□ -1.96
ATG3-207ENST00000494571 LYNX1G3V0Z9 82 aa2.81□□□□□ -1.96
ATG3-207ENST00000494571 LYNX1P0DP58 116 aa2.81□□□□□ -1.96
ATG3-207ENST00000494571 CXCL6P80162 114 aa2.81□□□□□ -1.96
ATG3-207ENST00000494571 SPINK13Q1W4C9 94 aa2.81□□□□□ -1.96
ATG3-207ENST00000494571 C9orf106Q8NAJ2 232 aa2.81□□□□□ -1.96
ATG3-207ENST00000494571 SPATA3Q8NHX4 192 aa2.81□□□□□ -1.96
ATG3-207ENST00000494571 LENEPQ9Y5L5 61 aa2.81□□□□□ -1.96
ATG3-207ENST00000494571 EP300Q09472 2414 aaPredicted RBP2.8□□□□□ -1.96
ATG3-207ENST00000494571 IGLV1-47P01700 117 aa2.8□□□□□ -1.96
ATG3-207ENST00000494571 SVEP1Q4LDE5 3571 aa2.8□□□□□ -1.96
ATG3-207ENST00000494571 CACNA1GO43497 2377 aa2.8□□□□□ -1.96
ATG3-207ENST00000494571 TRBV6-8A0A0A6YYG3 113 aa2.8□□□□□ -1.96
ATG3-207ENST00000494571 IGLV1-44P01699 117 aa2.8□□□□□ -1.96
ATG3-207ENST00000494571 C6orf99Q4VX62 202 aa2.8□□□□□ -1.96
ATG3-207ENST00000494571 C10orf25Q5T742 122 aa2.8□□□□□ -1.96
ATG3-207ENST00000494571 Q6ZSN1 163 aa2.8□□□□□ -1.96
ATG3-207ENST00000494571 PHF5AQ7RTV0 110 aaKnown RBP2.8□□□□□ -1.96
ATG3-207ENST00000494571 Q8N9W7 124 aa2.8□□□□□ -1.96
ATG3-207ENST00000494571 OCR1Q9BZK8 76 aa2.8□□□□□ -1.96
ATG3-207ENST00000494571 ANKRD17O75179 2603 aaKnown RBP2.8□□□□□ -1.96
ATG3-207ENST00000494571 IGHV4-28A0A0C4DH34 117 aa2.79□□□□□ -1.96
ATG3-207ENST00000494571 IGHV3-11P01762 117 aa2.79□□□□□ -1.96
ATG3-207ENST00000494571 ADM2Q7Z4H4 148 aa2.79□□□□□ -1.96
ATG3-207ENST00000494571 SMIM29Q86T20 159 aa2.79□□□□□ -1.96
ATG3-207ENST00000494571 DNAJC9-AS1A6NH13 148 aa2.79□□□□□ -1.96
ATG3-207ENST00000494571 ERC2-IT1O76042 136 aa2.79□□□□□ -1.96
ATG3-207ENST00000494571 HIGD2BQ4VC39 106 aa2.79□□□□□ -1.96
ATG3-207ENST00000494571 LINC01554Q52M75 96 aa2.79□□□□□ -1.96
ATG3-207ENST00000494571 IGLV5-45A0A087WSX0 123 aa2.78□□□□□ -1.96
ATG3-207ENST00000494571 A0A096LNT2 108 aa2.78□□□□□ -1.96
ATG3-207ENST00000494571 TRBV6-4A0A1B0GX49 114 aa2.78□□□□□ -1.96
ATG3-207ENST00000494571 C3orf84H3BNL1 204 aa2.78□□□□□ -1.96
ATG3-207ENST00000494571 LINC00313P59037 77 aa2.78□□□□□ -1.96
ATG3-207ENST00000494571 Q6ZQY7 126 aa2.78□□□□□ -1.96
ATG3-207ENST00000494571 ZNF706Q9Y5V0 76 aaPredicted RBP2.78□□□□□ -1.96
ATG3-207ENST00000494571 BOD1L1Q8NFC6 3051 aa2.78□□□□□ -1.96
ATG3-207ENST00000494571 CREBBPQ92793 2442 aa2.78□□□□□ -1.96
ATG3-207ENST00000494571 IGLV4-60A0A075B6I1 120 aa2.78□□□□□ -1.96
ATG3-207ENST00000494571 IGHV7-81A0A0B4J1V7 117 aa2.78□□□□□ -1.96
ATG3-207ENST00000494571 MOBPQ13875 183 aa2.78□□□□□ -1.96
ATG3-207ENST00000494571 MUC7Q8TAX7 377 aa2.78□□□□□ -1.96
ATG3-207ENST00000494571 LINC01560Q8TB33 94 aa2.78□□□□□ -1.96
ATG3-207ENST00000494571 DPM3Q9P2X0 92 aa2.78□□□□□ -1.96
ATG3-207ENST00000494571 CACNA1EQ15878 2313 aa2.78□□□□□ -1.96
ATG3-207ENST00000494571 NOTCH3Q9UM47 2321 aa2.78□□□□□ -1.96
ATG3-207ENST00000494571 ZDBF2Q9HCK1 2354 aa2.78□□□□□ -1.96
ATG3-207ENST00000494571 IGKV4-1P06312 121 aa2.78□□□□□ -1.97
ATG3-207ENST00000494571 ATP1A1-AS1Q5TC04 95 aa2.78□□□□□ -1.97
ATG3-207ENST00000494571 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
ATG3-207ENST00000494571 CUBNO60494 3623 aa2.77□□□□□ -1.97
ATG3-207ENST00000494571 KLLNB2CW77 178 aa2.77□□□□□ -1.97
ATG3-207ENST00000494571 IGHV3-53P01767 116 aa2.77□□□□□ -1.97
ATG3-207ENST00000494571 KLK12Q9UKR0 248 aa2.77□□□□□ -1.97
ATG3-207ENST00000494571 LOC110117498A0A087WWA1 95 aa2.77□□□□□ -1.97
ATG3-207ENST00000494571 FSHBP01225 129 aa2.77□□□□□ -1.97
ATG3-207ENST00000494571 C9orf116Q5BN46 136 aaPredicted RBP2.77□□□□□ -1.97
ATG3-207ENST00000494571 LCE4AQ5TA78 99 aa2.77□□□□□ -1.97
ATG3-207ENST00000494571 LINC00612Q8N6U2 182 aa2.77□□□□□ -1.97
ATG3-207ENST00000494571 Q8N9P0 234 aaPredicted RBP2.77□□□□□ -1.97
ATG3-207ENST00000494571 RNF5Q99942 180 aa2.77□□□□□ -1.97
ATG3-207ENST00000494571 RHPN1-AS1Q9BWJ2 59 aa2.77□□□□□ -1.97
ATG3-207ENST00000494571 FAM215AQ9Y5M1 114 aa2.77□□□□□ -1.97
ATG3-207ENST00000494571 ADGRG4Q8IZF6 3080 aa2.76□□□□□ -1.97
ATG3-207ENST00000494571 DEFB116Q30KQ4 102 aa2.76□□□□□ -1.97
ATG3-207ENST00000494571 ST20-AS1Q8NBB2 130 aa2.76□□□□□ -1.97
ATG3-207ENST00000494571 LIMD2Q9BT23 127 aa2.76□□□□□ -1.97
ATG3-207ENST00000494571 LAMA5O15230 3695 aa2.76□□□□□ -1.97
ATG3-207ENST00000494571 PIEZO1Q92508 2521 aa2.76□□□□□ -1.97
ATG3-207ENST00000494571 K7EQD1 137 aa2.76□□□□□ -1.97
ATG3-207ENST00000494571 NPBQ8NG41 125 aa2.76□□□□□ -1.97
ATG3-207ENST00000494571 B9D2Q9BPU9 175 aa2.76□□□□□ -1.97
ATG3-207ENST00000494571 RIF1Q5UIP0 2472 aaKnown RBP2.76□□□□□ -1.97
ATG3-207ENST00000494571 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.75□□□□□ -1.97
ATG3-207ENST00000494571 LY6G6EA0A0G2JKS1 128 aa2.75□□□□□ -1.97
ATG3-207ENST00000494571 B4DSR2 109 aa2.75□□□□□ -1.97
ATG3-207ENST00000494571 NDUFA4O00483 81 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms