RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 TRBV30A0A0K0K1B3 111 aa8.06□□□□□ -1.12
HDAC1-210ENST00000490081 NDUFA1O15239 70 aa8.06□□□□□ -1.12
HDAC1-210ENST00000490081 PRSS2P07478 247 aa8.06□□□□□ -1.12
HDAC1-210ENST00000490081 SPINK8P0C7L1 97 aa8.06□□□□□ -1.12
HDAC1-210ENST00000490081 KRTDAPP60985 99 aa8.06□□□□□ -1.12
HDAC1-210ENST00000490081 SDIM1Q6ZPB5 146 aa8.06□□□□□ -1.12
HDAC1-210ENST00000490081 COX7B2Q8TF08 81 aa8.06□□□□□ -1.12
HDAC1-210ENST00000490081 CAMK2N2Q96S95 79 aa8.06□□□□□ -1.12
HDAC1-210ENST00000490081 C20orf202A1L168 122 aa8.05□□□□□ -1.12
HDAC1-210ENST00000490081 C16orf90A8MZG2 172 aa8.05□□□□□ -1.12
HDAC1-210ENST00000490081 LINC00526Q96FQ7 95 aa8.05□□□□□ -1.12
HDAC1-210ENST00000490081 CARD19Q96LW7 228 aa8.05□□□□□ -1.12
HDAC1-210ENST00000490081 TLX1NBP0CAT3 122 aa8.04□□□□□ -1.12
HDAC1-210ENST00000490081 CKS1BP61024 79 aa8.04□□□□□ -1.12
HDAC1-210ENST00000490081 Q6ZRU5 148 aa8.04□□□□□ -1.12
HDAC1-210ENST00000490081 RYR1P21817 5038 aa8.03□□□□□ -1.12
HDAC1-210ENST00000490081 HERVK_113P61574 105 aa8.03□□□□□ -1.12
HDAC1-210ENST00000490081 UNQ6190/PRO20217Q6UXQ8 127 aa8.03□□□□□ -1.12
HDAC1-210ENST00000490081 Q6ZSA8 131 aa8.03□□□□□ -1.12
HDAC1-210ENST00000490081 PMCHL2Q9BQD1 86 aa8.03□□□□□ -1.12
HDAC1-210ENST00000490081 TOMM7Q9P0U1 55 aa8.03□□□□□ -1.12
HDAC1-210ENST00000490081 LRP1BQ9NZR2 4599 aa8.03□□□□□ -1.12
HDAC1-210ENST00000490081 LEPROTO15243 131 aa8.02□□□□□ -1.13
HDAC1-210ENST00000490081 KRTAP10-1P60331 282 aa8.02□□□□□ -1.13
HDAC1-210ENST00000490081 CIRBPQ14011 172 aaKnown RBP8.02□□□□□ -1.13
HDAC1-210ENST00000490081 C10orf25Q5T742 122 aa8.02□□□□□ -1.13
HDAC1-210ENST00000490081 C2orf82Q6UX34 121 aa8.02□□□□□ -1.13
HDAC1-210ENST00000490081 PLEKHB2Q96CS7 222 aa8.02□□□□□ -1.13
HDAC1-210ENST00000490081 DNAH8Q96JB1 4490 aa8.01□□□□□ -1.13
HDAC1-210ENST00000490081 E9PLD3 99 aa8.01□□□□□ -1.13
HDAC1-210ENST00000490081 FUSP35637 526 aaKnown RBP eCLIP8.01□□□□□ -1.13
HDAC1-210ENST00000490081 C6orf48Q9UBA6 75 aa8.01□□□□□ -1.13
HDAC1-210ENST00000490081 LOC107984640A0A0U1RRK4 108 aa8□□□□□ -1.13
HDAC1-210ENST00000490081 ZNF625Q96I27 306 aaPredicted RBP8□□□□□ -1.13
HDAC1-210ENST00000490081 LINC00474Q9P2X8 69 aa8□□□□□ -1.13
HDAC1-210ENST00000490081 CDK2AP2O75956 126 aa7.99□□□□□ -1.13
HDAC1-210ENST00000490081 NMUP48645 174 aa7.99□□□□□ -1.13
HDAC1-210ENST00000490081 HERV-K104P63124 156 aa7.99□□□□□ -1.13
HDAC1-210ENST00000490081 COX17Q14061 63 aa7.99□□□□□ -1.13
HDAC1-210ENST00000490081 ABCA13Q86UQ4 5058 aa7.99□□□□□ -1.13
HDAC1-210ENST00000490081 NDUFC2-KCTD14E9PQ53 114 aa7.98□□□□□ -1.13
HDAC1-210ENST00000490081 J3QQQ9 107 aa7.98□□□□□ -1.13
HDAC1-210ENST00000490081 KRTAP4-5Q9BYR2 181 aa7.98□□□□□ -1.13
HDAC1-210ENST00000490081 TMA7Q9Y2S6 64 aaKnown RBP7.98□□□□□ -1.13
HDAC1-210ENST00000490081 HSPG2P98160 4391 aa7.97□□□□□ -1.13
HDAC1-210ENST00000490081 MYMXA0A1B0GTQ4 84 aa7.97□□□□□ -1.13
HDAC1-210ENST00000490081 LINC00587B1AMM8 73 aa7.97□□□□□ -1.13
HDAC1-210ENST00000490081 EPM2AB3EWF7 344 aa7.97□□□□□ -1.13
HDAC1-210ENST00000490081 JOSD1Q15040 202 aaPredicted RBP7.97□□□□□ -1.13
HDAC1-210ENST00000490081 LINC01620Q4KN68 170 aa7.97□□□□□ -1.13
HDAC1-210ENST00000490081 STPG4Q8N801 248 aa7.97□□□□□ -1.13
HDAC1-210ENST00000490081 PTTG1IPP53801 180 aa7.96□□□□□ -1.14
HDAC1-210ENST00000490081 FAM30AQ9NZY2 134 aa7.96□□□□□ -1.14
HDAC1-210ENST00000490081 NDUFA12Q9UI09 145 aa7.96□□□□□ -1.14
HDAC1-210ENST00000490081 SCGB1D1O95968 90 aa7.95□□□□□ -1.14
HDAC1-210ENST00000490081 TSPEAR-AS2P59090 65 aa7.95□□□□□ -1.14
HDAC1-210ENST00000490081 Q6ZRP5 223 aa7.95□□□□□ -1.14
HDAC1-210ENST00000490081 SPACA4Q8TDM5 124 aa7.95□□□□□ -1.14
HDAC1-210ENST00000490081 A0A096LNI7 61 aa7.94□□□□□ -1.14
HDAC1-210ENST00000490081 LGALS3P17931 250 aaKnown RBP7.94□□□□□ -1.14
HDAC1-210ENST00000490081 XGP55808 180 aa7.94□□□□□ -1.14
HDAC1-210ENST00000490081 C9orf116Q5BN46 136 aaPredicted RBP7.94□□□□□ -1.14
HDAC1-210ENST00000490081 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.94□□□□□ -1.14
HDAC1-210ENST00000490081 APOBP04114 4563 aaKnown RBP7.94□□□□□ -1.14
HDAC1-210ENST00000490081 PLAC8Q9NZF1 115 aa7.93□□□□□ -1.14
HDAC1-210ENST00000490081 ERG28Q9UKR5 140 aa7.93□□□□□ -1.14
HDAC1-210ENST00000490081 IGKV2D-26A0A0A0MRZ7 120 aa7.92□□□□□ -1.14
HDAC1-210ENST00000490081 HSBP1L1C9JCN9 74 aa7.92□□□□□ -1.14
HDAC1-210ENST00000490081 PANO1I0J062 215 aa7.92□□□□□ -1.14
HDAC1-210ENST00000490081 ANKRD39Q53RE8 183 aa7.92□□□□□ -1.14
HDAC1-210ENST00000490081 RPL18AQ02543 176 aaKnown RBP7.91□□□□□ -1.14
HDAC1-210ENST00000490081 GAGE2BQ13066 116 aa7.91□□□□□ -1.14
HDAC1-210ENST00000490081 ATOH7Q8N100 152 aa7.91□□□□□ -1.14
HDAC1-210ENST00000490081 PLA2G2DQ9UNK4 145 aa7.91□□□□□ -1.14
HDAC1-210ENST00000490081 A0A087WYN8 130 aa7.9□□□□□ -1.14
HDAC1-210ENST00000490081 LOC107984156A0A0G2JMH3 177 aa7.9□□□□□ -1.14
HDAC1-210ENST00000490081 TIMM17BO60830 172 aa7.9□□□□□ -1.14
HDAC1-210ENST00000490081 MAJINQ3KP22 176 aa7.9□□□□□ -1.14
HDAC1-210ENST00000490081 ARL17AQ8IVW1 177 aa7.9□□□□□ -1.14
HDAC1-210ENST00000490081 CIRBP-AS1Q8TBR5 109 aa7.9□□□□□ -1.14
HDAC1-210ENST00000490081 IGKV2-24A0A0C4DH68 120 aa7.89□□□□□ -1.15
HDAC1-210ENST00000490081 A0A0J9YXY3 114 aa7.89□□□□□ -1.15
HDAC1-210ENST00000490081 CHTF8P0CG12 524 aa7.89□□□□□ -1.15
HDAC1-210ENST00000490081 PYY3Q5JQD4 70 aa7.89□□□□□ -1.15
HDAC1-210ENST00000490081 C9orf129Q5T035 196 aaKnown RBP7.89□□□□□ -1.15
HDAC1-210ENST00000490081 SCXQ7RTU7 201 aa7.89□□□□□ -1.15
HDAC1-210ENST00000490081 PFN2P35080 140 aa7.88□□□□□ -1.15
HDAC1-210ENST00000490081 GAGE2EQ4V326 116 aa7.88□□□□□ -1.15
HDAC1-210ENST00000490081 DPH3Q96FX2 82 aa7.88□□□□□ -1.15
HDAC1-210ENST00000490081 GAGE2DQ9UEU5 116 aa7.88□□□□□ -1.15
HDAC1-210ENST00000490081 ZNF815PA8K554 130 aa7.87□□□□□ -1.15
HDAC1-210ENST00000490081 SMIM13P0DJ93 91 aa7.87□□□□□ -1.15
HDAC1-210ENST00000490081 LINC00158P58513 81 aa7.87□□□□□ -1.15
HDAC1-210ENST00000490081 MEIG1Q5JSS6 88 aa7.87□□□□□ -1.15
HDAC1-210ENST00000490081 SND1-IT1Q9HBX3 110 aa7.87□□□□□ -1.15
HDAC1-210ENST00000490081 IGLV5-37A0A075B6J1 123 aa7.86□□□□□ -1.15
HDAC1-210ENST00000490081 A0A1W2PNN7 141 aa7.86□□□□□ -1.15
HDAC1-210ENST00000490081 DLEU1O43261 78 aa7.86□□□□□ -1.15
HDAC1-210ENST00000490081 PPDPFQ9H3Y8 114 aa7.86□□□□□ -1.15
HDAC1-210ENST00000490081 PCP2Q8IVA1 136 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms