RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 C10orf25Q5T742 122 aa9.55□□□□□ -0.88
LRIF1-202ENST00000485275 TM2D2Q9BX73 214 aa9.55□□□□□ -0.88
LRIF1-202ENST00000485275 COX11Q9Y6N1 276 aa9.55□□□□□ -0.88
LRIF1-202ENST00000485275 A0A0J9YXY3 114 aa9.54□□□□□ -0.88
LRIF1-202ENST00000485275 LCE6AA0A183 80 aa9.54□□□□□ -0.88
LRIF1-202ENST00000485275 LRCOL1A6NCL2 159 aa9.54□□□□□ -0.88
LRIF1-202ENST00000485275 NTN5Q8WTR8 489 aaPredicted RBP9.54□□□□□ -0.88
LRIF1-202ENST00000485275 SLPIP03973 132 aa9.53□□□□□ -0.88
LRIF1-202ENST00000485275 C6orf226Q5I0X4 101 aa9.53□□□□□ -0.88
LRIF1-202ENST00000485275 DNAH11Q96DT5 4516 aa9.53□□□□□ -0.88
LRIF1-202ENST00000485275 PSCAO43653 123 aa9.52□□□□□ -0.88
LRIF1-202ENST00000485275 PRSS2P07478 247 aa9.52□□□□□ -0.88
LRIF1-202ENST00000485275 LITAFQ99732 161 aa9.52□□□□□ -0.88
LRIF1-202ENST00000485275 UNQ6190/PRO20217Q6UXQ8 127 aa9.52□□□□□ -0.89
LRIF1-202ENST00000485275 PCP4L1A6NKN8 68 aa9.51□□□□□ -0.89
LRIF1-202ENST00000485275 CFAP161Q6P656 301 aa9.51□□□□□ -0.89
LRIF1-202ENST00000485275 ZNF561-AS1K7EIQ3 104 aa9.5□□□□□ -0.89
LRIF1-202ENST00000485275 DDTP30046 118 aa9.5□□□□□ -0.89
LRIF1-202ENST00000485275 C9orf116Q5BN46 136 aaPredicted RBP9.5□□□□□ -0.89
LRIF1-202ENST00000485275 C1orf134Q5TEV5 83 aa9.5□□□□□ -0.89
LRIF1-202ENST00000485275 CKS1BP61024 79 aa9.5□□□□□ -0.89
LRIF1-202ENST00000485275 SCGB1D4Q6XE38 83 aa9.5□□□□□ -0.89
LRIF1-202ENST00000485275 Q6ZRU5 148 aa9.5□□□□□ -0.89
LRIF1-202ENST00000485275 C6orf48Q9UBA6 75 aa9.5□□□□□ -0.89
LRIF1-202ENST00000485275 RTL8CO15255 209 aa9.49□□□□□ -0.89
LRIF1-202ENST00000485275 CXCL5P42830 114 aa9.49□□□□□ -0.89
LRIF1-202ENST00000485275 HNRNPA3P51991 378 aaKnown RBP9.49□□□□□ -0.89
LRIF1-202ENST00000485275 ADAMTSL4-AS1Q5T5F5 129 aa9.49□□□□□ -0.89
LRIF1-202ENST00000485275 A0A0U1RRA0 63 aa9.48□□□□□ -0.89
LRIF1-202ENST00000485275 DAND5Q8N907 189 aa9.48□□□□□ -0.89
LRIF1-202ENST00000485275 RYR3Q15413 4870 aa9.48□□□□□ -0.89
LRIF1-202ENST00000485275 HERV-K104P63124 156 aa9.47□□□□□ -0.89
LRIF1-202ENST00000485275 C2orf48Q96LS8 159 aa9.47□□□□□ -0.89
LRIF1-202ENST00000485275 CAMK2N2Q96S95 79 aa9.47□□□□□ -0.89
LRIF1-202ENST00000485275 HIGD1BQ9P298 99 aa9.47□□□□□ -0.89
LRIF1-202ENST00000485275 EIF4EBP3O60516 100 aaPredicted RBP9.47□□□□□ -0.89
LRIF1-202ENST00000485275 SMIM13P0DJ93 91 aa9.47□□□□□ -0.89
LRIF1-202ENST00000485275 A0A087WTM6 91 aa9.46□□□□□ -0.9
LRIF1-202ENST00000485275 CTAG1AP78358 180 aa9.46□□□□□ -0.9
LRIF1-202ENST00000485275 ERG28Q9UKR5 140 aa9.46□□□□□ -0.9
LRIF1-202ENST00000485275 HECTD4Q9Y4D8 3996 aa9.46□□□□□ -0.9
LRIF1-202ENST00000485275 DNAH5Q8TE73 4624 aa9.45□□□□□ -0.9
LRIF1-202ENST00000485275 MEIG1Q5JSS6 88 aa9.45□□□□□ -0.9
LRIF1-202ENST00000485275 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.45□□□□□ -0.9
LRIF1-202ENST00000485275 PFN2P35080 140 aa9.45□□□□□ -0.9
LRIF1-202ENST00000485275 TNP2Q05952 138 aa9.45□□□□□ -0.9
LRIF1-202ENST00000485275 SYCNQ0VAF6 134 aa9.45□□□□□ -0.9
LRIF1-202ENST00000485275 SFTA2Q6UW10 78 aa9.45□□□□□ -0.9
LRIF1-202ENST00000485275 PKD1P98161 4303 aa9.44□□□□□ -0.9
LRIF1-202ENST00000485275 LINC00587B1AMM8 73 aa9.44□□□□□ -0.9
LRIF1-202ENST00000485275 TIMM17BO60830 172 aa9.44□□□□□ -0.9
LRIF1-202ENST00000485275 Q8N814 137 aa9.44□□□□□ -0.9
LRIF1-202ENST00000485275 SPANXB1Q9NS25 103 aaPredicted RBP9.44□□□□□ -0.9
LRIF1-202ENST00000485275 FUSP35637 526 aaKnown RBP eCLIP9.43□□□□□ -0.9
LRIF1-202ENST00000485275 CARD19Q96LW7 228 aa9.43□□□□□ -0.9
LRIF1-202ENST00000485275 TRBV30A0A0K0K1B3 111 aa9.42□□□□□ -0.9
LRIF1-202ENST00000485275 TMEM238C9JI98 176 aa9.42□□□□□ -0.9
LRIF1-202ENST00000485275 NPC2P61916 151 aa9.42□□□□□ -0.9
LRIF1-202ENST00000485275 SOSTDC1Q6X4U4 206 aa9.42□□□□□ -0.9
LRIF1-202ENST00000485275 MIR7-3HGQ8N6C7 128 aa9.42□□□□□ -0.9
LRIF1-202ENST00000485275 CNBPP62633 177 aaKnown RBP9.42□□□□□ -0.9
LRIF1-202ENST00000485275 SPANXDQ9BXN6 97 aa9.42□□□□□ -0.9
LRIF1-202ENST00000485275 SPANXCQ9NY87 97 aa9.42□□□□□ -0.9
LRIF1-202ENST00000485275 F8WDY8 70 aa9.41□□□□□ -0.9
LRIF1-202ENST00000485275 LINC00158P58513 81 aa9.4□□□□□ -0.9
LRIF1-202ENST00000485275 HSD52Q0P140 79 aa9.4□□□□□ -0.9
LRIF1-202ENST00000485275 HIST1H4GQ99525 98 aa9.4□□□□□ -0.9
LRIF1-202ENST00000485275 C14orf177Q52M58 125 aa9.4□□□□□ -0.91
LRIF1-202ENST00000485275 HINT1P49773 126 aaPredicted RBP9.39□□□□□ -0.91
LRIF1-202ENST00000485275 FXYD2P54710 66 aa9.39□□□□□ -0.91
LRIF1-202ENST00000485275 SRSF9Q13242 221 aaKnown RBP eCLIP9.39□□□□□ -0.91
LRIF1-202ENST00000485275 LINC01620Q4KN68 170 aa9.39□□□□□ -0.91
LRIF1-202ENST00000485275 Q6ZRP5 223 aa9.39□□□□□ -0.91
LRIF1-202ENST00000485275 CIRBPQ14011 172 aaKnown RBP9.38□□□□□ -0.91
LRIF1-202ENST00000485275 COX17Q14061 63 aa9.38□□□□□ -0.91
LRIF1-202ENST00000485275 BVES-AS1Q5T3Y7 98 aa9.38□□□□□ -0.91
LRIF1-202ENST00000485275 MUSTN1Q8IVN3 82 aa9.38□□□□□ -0.91
LRIF1-202ENST00000485275 CEND1Q8N111 149 aa9.38□□□□□ -0.91
LRIF1-202ENST00000485275 LINC00308Q8TCZ7 52 aa9.38□□□□□ -0.91
LRIF1-202ENST00000485275 GCSHP23434 173 aa9.37□□□□□ -0.91
LRIF1-202ENST00000485275 Q8NDZ9 215 aa9.37□□□□□ -0.91
LRIF1-202ENST00000485275 SND1-IT1Q9HBX3 110 aa9.37□□□□□ -0.91
LRIF1-202ENST00000485275 NDUFC2-KCTD14E9PQ53 114 aa9.37□□□□□ -0.91
LRIF1-202ENST00000485275 EREGO14944 169 aa9.37□□□□□ -0.91
LRIF1-202ENST00000485275 TAL2Q16559 108 aa9.37□□□□□ -0.91
LRIF1-202ENST00000485275 RNF151Q2KHN1 245 aa9.37□□□□□ -0.91
LRIF1-202ENST00000485275 SNHG12Q9BXW3 62 aa9.36□□□□□ -0.91
LRIF1-202ENST00000485275 XAGE1AQ9HD64 81 aa9.36□□□□□ -0.91
LRIF1-202ENST00000485275 TLX1NBP0CAT3 122 aa9.35□□□□□ -0.91
LRIF1-202ENST00000485275 KRTAP10-2P60368 255 aa9.35□□□□□ -0.91
LRIF1-202ENST00000485275 PTTG1IPP53801 180 aa9.35□□□□□ -0.91
LRIF1-202ENST00000485275 Q6ZVH6 145 aa9.35□□□□□ -0.91
LRIF1-202ENST00000485275 C9orf163Q8N9P6 203 aa9.35□□□□□ -0.91
LRIF1-202ENST00000485275 PKHD1P08F94 4074 aa9.34□□□□□ -0.91
LRIF1-202ENST00000485275 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.34□□□□□ -0.91
LRIF1-202ENST00000485275 RPL18AQ02543 176 aaKnown RBP9.34□□□□□ -0.91
LRIF1-202ENST00000485275 GAGE2EQ4V326 116 aa9.34□□□□□ -0.91
LRIF1-202ENST00000485275 C9orf129Q5T035 196 aaKnown RBP9.34□□□□□ -0.91
LRIF1-202ENST00000485275 GAGE2DQ9UEU5 116 aa9.34□□□□□ -0.91
LRIF1-202ENST00000485275 A4D1N5 150 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms