RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 CELSR1Q9NYQ6 3014 aa0.29□□□□□ -2.36
SMC4-215ENST00000484799 FXYD6-FXYD2A0A087WZ82 144 aa0.29□□□□□ -2.36
SMC4-215ENST00000484799 PSMG4Q5JS54 123 aa0.29□□□□□ -2.36
SMC4-215ENST00000484799 SERP2Q8N6R1 65 aa0.29□□□□□ -2.36
SMC4-215ENST00000484799 PPRC1Q5VV67 1664 aaKnown RBP0.29□□□□□ -2.36
SMC4-215ENST00000484799 A0A0G2JND7 137 aa0.28□□□□□ -2.36
SMC4-215ENST00000484799 H7BZZ5 65 aa0.28□□□□□ -2.36
SMC4-215ENST00000484799 UQCRHP07919 91 aa0.28□□□□□ -2.36
SMC4-215ENST00000484799 COX6B1P14854 86 aa0.28□□□□□ -2.36
SMC4-215ENST00000484799 DEFB109BQ30KR1 87 aa0.28□□□□□ -2.36
SMC4-215ENST00000484799 VWFP04275 2813 aa0.28□□□□□ -2.36
SMC4-215ENST00000484799 RAPGEF2Q9Y4G8 1499 aa0.28□□□□□ -2.37
SMC4-215ENST00000484799 COL5A1-AS1Q5SY13 56 aa0.27□□□□□ -2.37
SMC4-215ENST00000484799 NCMAPQ5T1S8 102 aa0.27□□□□□ -2.37
SMC4-215ENST00000484799 TENM4Q6N022 2769 aa0.26□□□□□ -2.37
SMC4-215ENST00000484799 PKD1L1Q8TDX9 2849 aa0.26□□□□□ -2.37
SMC4-215ENST00000484799 C7orf77A4D0Y5 90 aa0.26□□□□□ -2.37
SMC4-215ENST00000484799 H3BQF6 201 aa0.26□□□□□ -2.37
SMC4-215ENST00000484799 ANKRD26Q9UPS8 1709 aa0.26□□□□□ -2.37
SMC4-215ENST00000484799 COL7A1Q02388 2944 aa0.26□□□□□ -2.37
SMC4-215ENST00000484799 AKAP12Q02952 1782 aa0.25□□□□□ -2.37
SMC4-215ENST00000484799 ABCC10Q5T3U5 1492 aa0.25□□□□□ -2.37
SMC4-215ENST00000484799 CCDC141Q6ZP82 1450 aa0.25□□□□□ -2.37
SMC4-215ENST00000484799 PLEKHH2Q8IVE3 1493 aa0.25□□□□□ -2.37
SMC4-215ENST00000484799 MACF1Q9UPN3 7388 aaKnown RBP0.25□□□□□ -2.37
SMC4-215ENST00000484799 CCNB3Q8WWL7 1395 aa0.25□□□□□ -2.37
SMC4-215ENST00000484799 A0A087WVE0 104 aa0.25□□□□□ -2.37
SMC4-215ENST00000484799 LINC00959A0A1B0GUT2 108 aa0.25□□□□□ -2.37
SMC4-215ENST00000484799 SPRR1AP35321 89 aa0.25□□□□□ -2.37
SMC4-215ENST00000484799 PKIAP61925 76 aa0.25□□□□□ -2.37
SMC4-215ENST00000484799 URB1O60287 2271 aaKnown RBP0.25□□□□□ -2.37
SMC4-215ENST00000484799 WNK2Q9Y3S1 2297 aa0.25□□□□□ -2.37
SMC4-215ENST00000484799 CLTCQ00610 1675 aaKnown RBP0.24□□□□□ -2.37
SMC4-215ENST00000484799 SHPRHQ149N8 1683 aa0.24□□□□□ -2.37
SMC4-215ENST00000484799 EPRSP07814 1512 aaKnown RBP0.24□□□□□ -2.37
SMC4-215ENST00000484799 SPTA1P02549 2419 aa0.24□□□□□ -2.37
SMC4-215ENST00000484799 TROQ12816 1431 aaPredicted RBP0.24□□□□□ -2.37
SMC4-215ENST00000484799 TRBV7-7A0A0K0K1E9 115 aa0.24□□□□□ -2.37
SMC4-215ENST00000484799 SYS1-DBNDD2H3BUS1 97 aa0.24□□□□□ -2.37
SMC4-215ENST00000484799 ASIPP42127 132 aa0.24□□□□□ -2.37
SMC4-215ENST00000484799 USMG5Q96IX5 58 aa0.24□□□□□ -2.37
SMC4-215ENST00000484799 FLNCQ14315 2725 aa0.24□□□□□ -2.37
SMC4-215ENST00000484799 ATRQ13535 2644 aa0.24□□□□□ -2.37
SMC4-215ENST00000484799 CACNA1AO00555 2505 aa0.24□□□□□ -2.37
SMC4-215ENST00000484799 NLRP1Q9C000 1473 aa0.23□□□□□ -2.37
SMC4-215ENST00000484799 EDC4Q6P2E9 1401 aaKnown RBP0.23□□□□□ -2.37
SMC4-215ENST00000484799 UQCRHLA0A096LP55 91 aa0.23□□□□□ -2.37
SMC4-215ENST00000484799 HMGN3Q15651 99 aa0.23□□□□□ -2.37
SMC4-215ENST00000484799 LCN9Q8WX39 176 aa0.23□□□□□ -2.37
SMC4-215ENST00000484799 DNAJC13O75165 2243 aa0.23□□□□□ -2.37
SMC4-215ENST00000484799 KIAA0556O60303 1618 aa0.23□□□□□ -2.37
SMC4-215ENST00000484799 FANCAO15360 1455 aa0.22□□□□□ -2.37
SMC4-215ENST00000484799 IQSEC2Q5JU85 1478 aa0.22□□□□□ -2.37
SMC4-215ENST00000484799 TSC2P49815 1807 aa0.22□□□□□ -2.37
SMC4-215ENST00000484799 MARF1Q9Y4F3 1742 aaKnown RBP0.22□□□□□ -2.37
SMC4-215ENST00000484799 H0Y9P7 68 aa0.22□□□□□ -2.37
SMC4-215ENST00000484799 TARBP1Q13395 1621 aaKnown RBP0.21□□□□□ -2.38
SMC4-215ENST00000484799 A0A1B0GU69 56 aa0.21□□□□□ -2.38
SMC4-215ENST00000484799 COX8AP10176 69 aa0.21□□□□□ -2.38
SMC4-215ENST00000484799 ZNF720Q7Z2F6 126 aa0.21□□□□□ -2.38
SMC4-215ENST00000484799 C6orf201Q7Z4U5 140 aa0.21□□□□□ -2.38
SMC4-215ENST00000484799 PAPPA2Q9BXP8 1791 aa0.2□□□□□ -2.38
SMC4-215ENST00000484799 K7EQZ3 153 aa0.2□□□□□ -2.38
SMC4-215ENST00000484799 ARMS2P0C7Q2 107 aa0.2□□□□□ -2.38
SMC4-215ENST00000484799 FAUP35544 74 aaKnown RBP0.2□□□□□ -2.38
SMC4-215ENST00000484799 ALKAL2Q6UX46 152 aa0.2□□□□□ -2.38
SMC4-215ENST00000484799 SNHG12Q9BXW3 62 aa0.2□□□□□ -2.38
SMC4-215ENST00000484799 KNDC1Q76NI1 1749 aa0.2□□□□□ -2.38
SMC4-215ENST00000484799 NSD1Q96L73 2696 aaPredicted RBP0.2□□□□□ -2.38
SMC4-215ENST00000484799 HUWE1Q7Z6Z7 4374 aaKnown RBP0.2□□□□□ -2.38
SMC4-215ENST00000484799 KMT2AQ03164 3969 aa0.19□□□□□ -2.38
SMC4-215ENST00000484799 NRXN1Q9ULB1 1477 aa0.19□□□□□ -2.38
SMC4-215ENST00000484799 GYPAP02724 150 aa0.19□□□□□ -2.38
SMC4-215ENST00000484799 SPRR1BP22528 89 aa0.19□□□□□ -2.38
SMC4-215ENST00000484799 GNGT1P63211 74 aa0.19□□□□□ -2.38
SMC4-215ENST00000484799 ETDBQ3ZM63 59 aa0.18□□□□□ -2.38
SMC4-215ENST00000484799 DEFB107AQ8IZN7 70 aa0.18□□□□□ -2.38
SMC4-215ENST00000484799 BAZ1AQ9NRL2 1556 aaPredicted RBP0.18□□□□□ -2.38
SMC4-215ENST00000484799 LRRC37AA6NMS7 1700 aa0.18□□□□□ -2.38
SMC4-215ENST00000484799 CUX1P39880 1505 aa0.18□□□□□ -2.38
SMC4-215ENST00000484799 FLNAP21333 2647 aaKnown RBP0.17□□□□□ -2.38
SMC4-215ENST00000484799 ATP10BO94823 1461 aa0.17□□□□□ -2.38
SMC4-215ENST00000484799 MON2Q7Z3U7 1717 aa0.17□□□□□ -2.38
SMC4-215ENST00000484799 KIAA1551Q9HCM1 1747 aa0.17□□□□□ -2.38
SMC4-215ENST00000484799 C5P01031 1676 aa0.17□□□□□ -2.38
SMC4-215ENST00000484799 ANKRD36A6QL64 1941 aa0.17□□□□□ -2.38
SMC4-215ENST00000484799 SPINK4O60575 86 aa0.16□□□□□ -2.38
SMC4-215ENST00000484799 CSPG4Q6UVK1 2322 aa0.16□□□□□ -2.38
SMC4-215ENST00000484799 TTC37Q6PGP7 1564 aa0.15□□□□□ -2.38
SMC4-215ENST00000484799 SMIM11AP58511 58 aa0.15□□□□□ -2.39
SMC4-215ENST00000484799 MYH4Q9Y623 1939 aa0.15□□□□□ -2.39
SMC4-215ENST00000484799 CRYBG1Q9Y4K1 1723 aa0.14□□□□□ -2.39
SMC4-215ENST00000484799 SPRR2GQ9BYE4 73 aa0.14□□□□□ -2.39
SMC4-215ENST00000484799 CHD8Q9HCK8 2581 aa0.14□□□□□ -2.39
SMC4-215ENST00000484799 SAMD9Q5K651 1589 aa0.14□□□□□ -2.39
SMC4-215ENST00000484799 DCHS2Q6V1P9 2916 aa0.13□□□□□ -2.39
SMC4-215ENST00000484799 D6R8Y8 96 aa0.13□□□□□ -2.39
SMC4-215ENST00000484799 F8WEM9 126 aa0.13□□□□□ -2.39
SMC4-215ENST00000484799 LEPROTL1O95214 131 aa0.13□□□□□ -2.39
SMC4-215ENST00000484799 MUSTN1Q8IVN3 82 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms