RNA–Protein interactions for RNA: ENST00000468777.5

PCCB-208, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-208ENST00000468777 LINC00959A0A1B0GUT2 108 aa12.61□□□□□ -0.39
PCCB-208ENST00000468777 LRCOL1A6NCL2 159 aa12.61□□□□□ -0.39
PCCB-208ENST00000468777 A0A1B0GVY2 172 aa12.61□□□□□ -0.39
PCCB-208ENST00000468777 CHCHD10Q8WYQ3 142 aaPredicted RBP12.61□□□□□ -0.39
PCCB-208ENST00000468777 XCL1P47992 114 aa12.6□□□□□ -0.39
PCCB-208ENST00000468777 GAGE12HA6NDE8 117 aa12.59□□□□□ -0.39
PCCB-208ENST00000468777 CCL25O15444 150 aa12.59□□□□□ -0.39
PCCB-208ENST00000468777 FUSP35637 526 aaKnown RBP eCLIP12.59□□□□□ -0.39
PCCB-208ENST00000468777 SS18Q15532 418 aa12.59□□□□□ -0.39
PCCB-208ENST00000468777 IGLV5-39A0A0G2JS06 123 aa12.58□□□□□ -0.4
PCCB-208ENST00000468777 SMIM1B2RUZ4 78 aa12.58□□□□□ -0.4
PCCB-208ENST00000468777 COL5A1-AS1Q5SY13 56 aa12.58□□□□□ -0.4
PCCB-208ENST00000468777 IGHV3OR16-9A0A0B4J2B5 98 aa12.57□□□□□ -0.4
PCCB-208ENST00000468777 KRTAP10-2P60368 255 aa12.56□□□□□ -0.4
PCCB-208ENST00000468777 TAL2Q16559 108 aa12.56□□□□□ -0.4
PCCB-208ENST00000468777 NDUFA12Q9UI09 145 aa12.56□□□□□ -0.4
PCCB-208ENST00000468777 ORAOV1Q8WV07 137 aa12.55□□□□□ -0.4
PCCB-208ENST00000468777 HIST1H4GQ99525 98 aa12.55□□□□□ -0.4
PCCB-208ENST00000468777 FOXI1Q12951 378 aa12.55□□□□□ -0.4
PCCB-208ENST00000468777 USP17L23D6RBM5 183 aa12.54□□□□□ -0.4
PCCB-208ENST00000468777 GCSHP23434 173 aa12.54□□□□□ -0.4
PCCB-208ENST00000468777 DYNC1H1Q14204 4646 aaKnown RBP12.54□□□□□ -0.4
PCCB-208ENST00000468777 A0A087WZ39 114 aa12.53□□□□□ -0.4
PCCB-208ENST00000468777 CEND1Q8N111 149 aa12.53□□□□□ -0.4
PCCB-208ENST00000468777 Q8N814 137 aa12.53□□□□□ -0.4
PCCB-208ENST00000468777 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.52□□□□□ -0.41
PCCB-208ENST00000468777 SRSF9Q13242 221 aaKnown RBP eCLIP12.52□□□□□ -0.41
PCCB-208ENST00000468777 CD164L2Q6UWJ8 174 aa12.52□□□□□ -0.41
PCCB-208ENST00000468777 C5orf38Q86SI9 138 aa12.52□□□□□ -0.41
PCCB-208ENST00000468777 A0A0J9YXY3 114 aa12.51□□□□□ -0.41
PCCB-208ENST00000468777 LRP1BQ9NZR2 4599 aa12.51□□□□□ -0.41
PCCB-208ENST00000468777 NDUFA1O15239 70 aa12.51□□□□□ -0.41
PCCB-208ENST00000468777 SPANXB1Q9NS25 103 aaPredicted RBP12.51□□□□□ -0.41
PCCB-208ENST00000468777 FXYD2P54710 66 aa12.5□□□□□ -0.41
PCCB-208ENST00000468777 A6NDN8 102 aa12.49□□□□□ -0.41
PCCB-208ENST00000468777 PTTG1IPP53801 180 aa12.48□□□□□ -0.41
PCCB-208ENST00000468777 C15orf56Q8N910 161 aa12.48□□□□□ -0.41
PCCB-208ENST00000468777 TMEM238C9JI98 176 aa12.47□□□□□ -0.41
PCCB-208ENST00000468777 LINC01561Q8N1V8 128 aa12.47□□□□□ -0.41
PCCB-208ENST00000468777 COX7B2Q8TF08 81 aa12.47□□□□□ -0.41
PCCB-208ENST00000468777 TOMM7Q9P0U1 55 aa12.47□□□□□ -0.41
PCCB-208ENST00000468777 COX7A2LO14548 114 aa12.46□□□□□ -0.41
PCCB-208ENST00000468777 HIGD2BQ4VC39 106 aa12.46□□□□□ -0.41
PCCB-208ENST00000468777 BIRC6Q9NR09 4857 aa12.46□□□□□ -0.42
PCCB-208ENST00000468777 ZNF625Q96I27 306 aaPredicted RBP12.46□□□□□ -0.42
PCCB-208ENST00000468777 MALP21145 153 aa12.44□□□□□ -0.42
PCCB-208ENST00000468777 C14orf177Q52M58 125 aa12.44□□□□□ -0.42
PCCB-208ENST00000468777 LITAFQ99732 161 aa12.44□□□□□ -0.42
PCCB-208ENST00000468777 IGLV5-52A0A0A0MRZ9 124 aa12.44□□□□□ -0.42
PCCB-208ENST00000468777 C16orf90A8MZG2 172 aa12.44□□□□□ -0.42
PCCB-208ENST00000468777 HERV-K104P63124 156 aa12.44□□□□□ -0.42
PCCB-208ENST00000468777 LINC00526Q96FQ7 95 aa12.44□□□□□ -0.42
PCCB-208ENST00000468777 PGPEP1Q9NXJ5 209 aa12.44□□□□□ -0.42
PCCB-208ENST00000468777 TAX1BP3O14907 124 aa12.43□□□□□ -0.42
PCCB-208ENST00000468777 TIMM17BO60830 172 aa12.43□□□□□ -0.42
PCCB-208ENST00000468777 NHP2Q9NX24 153 aaKnown RBP12.43□□□□□ -0.42
PCCB-208ENST00000468777 CIRBPQ14011 172 aaKnown RBP12.42□□□□□ -0.42
PCCB-208ENST00000468777 LINC01620Q4KN68 170 aa12.42□□□□□ -0.42
PCCB-208ENST00000468777 CFAP161Q6P656 301 aa12.42□□□□□ -0.42
PCCB-208ENST00000468777 NTN5Q8WTR8 489 aaPredicted RBP12.42□□□□□ -0.42
PCCB-208ENST00000468777 TMEM238LA0A1B0GVL6 79 aa12.42□□□□□ -0.42
PCCB-208ENST00000468777 A6NJY4 79 aa12.42□□□□□ -0.42
PCCB-208ENST00000468777 SMIM13P0DJ93 91 aa12.41□□□□□ -0.42
PCCB-208ENST00000468777 ADAMTSL4-AS1Q5T5F5 129 aa12.41□□□□□ -0.42
PCCB-208ENST00000468777 SPANXDQ9BXN6 97 aa12.41□□□□□ -0.42
PCCB-208ENST00000468777 SPANXCQ9NY87 97 aa12.41□□□□□ -0.42
PCCB-208ENST00000468777 PRSS2P07478 247 aa12.4□□□□□ -0.42
PCCB-208ENST00000468777 C6orf226Q5I0X4 101 aa12.4□□□□□ -0.42
PCCB-208ENST00000468777 Q6ZVH6 145 aa12.4□□□□□ -0.42
PCCB-208ENST00000468777 GVQW2A0A096LPI5 108 aaPredicted RBP12.4□□□□□ -0.42
PCCB-208ENST00000468777 SLPIP03973 132 aa12.4□□□□□ -0.42
PCCB-208ENST00000468777 Q8IZM0 81 aa12.4□□□□□ -0.42
PCCB-208ENST00000468777 MEIG1Q5JSS6 88 aa12.39□□□□□ -0.43
PCCB-208ENST00000468777 SFTA2Q6UW10 78 aa12.39□□□□□ -0.43
PCCB-208ENST00000468777 MUSTN1Q8IVN3 82 aa12.38□□□□□ -0.43
PCCB-208ENST00000468777 K7ERJ3 54 aa12.38□□□□□ -0.43
PCCB-208ENST00000468777 RAB37Q96AX2 223 aa12.38□□□□□ -0.43
PCCB-208ENST00000468777 KIAA1109Q2LD37 5005 aa12.37□□□□□ -0.43
PCCB-208ENST00000468777 A0A1B0GWB2 263 aa12.37□□□□□ -0.43
PCCB-208ENST00000468777 APOMO95445 188 aa12.37□□□□□ -0.43
PCCB-208ENST00000468777 APOBP04114 4563 aaKnown RBP12.37□□□□□ -0.43
PCCB-208ENST00000468777 RPL24P83731 157 aaKnown RBP12.37□□□□□ -0.43
PCCB-208ENST00000468777 ZNF561-AS1K7EIQ3 104 aa12.36□□□□□ -0.43
PCCB-208ENST00000468777 A0A0U1RRA0 63 aa12.36□□□□□ -0.43
PCCB-208ENST00000468777 KRTAP10-1P60331 282 aa12.36□□□□□ -0.43
PCCB-208ENST00000468777 SPAG11BQ08648 103 aa12.36□□□□□ -0.43
PCCB-208ENST00000468777 KIAA0087Q14695 138 aa12.35□□□□□ -0.43
PCCB-208ENST00000468777 DAND5Q8N907 189 aa12.35□□□□□ -0.43
PCCB-208ENST00000468777 DNAH8Q96JB1 4490 aa12.34□□□□□ -0.43
PCCB-208ENST00000468777 A4D1N5 150 aa12.34□□□□□ -0.43
PCCB-208ENST00000468777 IFITM1P13164 125 aa12.34□□□□□ -0.43
PCCB-208ENST00000468777 CKS1BP61024 79 aa12.34□□□□□ -0.43
PCCB-208ENST00000468777 CNBPP62633 177 aaKnown RBP12.34□□□□□ -0.43
PCCB-208ENST00000468777 C9orf118A6NHY6 69 aa12.34□□□□□ -0.43
PCCB-208ENST00000468777 CXCL5P42830 114 aa12.34□□□□□ -0.43
PCCB-208ENST00000468777 NPC2P61916 151 aa12.33□□□□□ -0.44
PCCB-208ENST00000468777 C2orf82Q6UX34 121 aa12.32□□□□□ -0.44
PCCB-208ENST00000468777 CFC1BP0CG36 223 aa12.31□□□□□ -0.44
PCCB-208ENST00000468777 CFC1P0CG37 223 aa12.31□□□□□ -0.44
PCCB-208ENST00000468777 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms