RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 MED13LQ71F56 2210 aa1.67□□□□□ -2.14
VPS8-215ENST00000460158 NRAPQ86VF7 1730 aa1.67□□□□□ -2.14
VPS8-215ENST00000460158 NBDYA0A0U1RRE5 68 aa1.67□□□□□ -2.14
VPS8-215ENST00000460158 INE1O15225 51 aa1.67□□□□□ -2.14
VPS8-215ENST00000460158 ATXN8Q156A1 80 aa1.67□□□□□ -2.14
VPS8-215ENST00000460158 C5orf56Q8N8D9 126 aa1.67□□□□□ -2.14
VPS8-215ENST00000460158 SNURFQ9Y675 71 aa1.67□□□□□ -2.14
VPS8-215ENST00000460158 DIP2AQ14689 1571 aa1.67□□□□□ -2.14
VPS8-215ENST00000460158 UGGT1Q9NYU2 1555 aa1.67□□□□□ -2.14
VPS8-215ENST00000460158 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.66□□□□□ -2.14
VPS8-215ENST00000460158 A0A0D9SFI3 127 aa1.66□□□□□ -2.14
VPS8-215ENST00000460158 A0A1B0GUT8 65 aa1.66□□□□□ -2.14
VPS8-215ENST00000460158 FXYD4P59646 89 aa1.66□□□□□ -2.14
VPS8-215ENST00000460158 COX17Q14061 63 aa1.66□□□□□ -2.14
VPS8-215ENST00000460158 LINC00304Q8N9R0 145 aa1.66□□□□□ -2.14
VPS8-215ENST00000460158 SMIM4Q8WVI0 70 aa1.66□□□□□ -2.14
VPS8-215ENST00000460158 WFDC6Q9BQY6 131 aa1.66□□□□□ -2.14
VPS8-215ENST00000460158 FAM103A1Q9BTL3 118 aaKnown RBP1.66□□□□□ -2.14
VPS8-215ENST00000460158 ATP7BP35670 1465 aa1.66□□□□□ -2.14
VPS8-215ENST00000460158 CACNA1CQ13936 2221 aa1.66□□□□□ -2.14
VPS8-215ENST00000460158 SDK1Q7Z5N4 2213 aa1.66□□□□□ -2.14
VPS8-215ENST00000460158 LOC110117498A0A087WWA1 95 aa1.65□□□□□ -2.15
VPS8-215ENST00000460158 FXYD6-FXYD2A0A087WZ82 144 aa1.65□□□□□ -2.15
VPS8-215ENST00000460158 TRAV1-2A0A0B4J238 106 aa1.65□□□□□ -2.15
VPS8-215ENST00000460158 M0R2N4 97 aa1.65□□□□□ -2.15
VPS8-215ENST00000460158 HCP5Q6MZN7 132 aa1.65□□□□□ -2.15
VPS8-215ENST00000460158 DEFB107AQ8IZN7 70 aa1.65□□□□□ -2.15
VPS8-215ENST00000460158 ZNF625Q96I27 306 aaPredicted RBP1.65□□□□□ -2.15
VPS8-215ENST00000460158 FXYD6Q9H0Q3 95 aa1.65□□□□□ -2.15
VPS8-215ENST00000460158 KIAA0556O60303 1618 aa1.65□□□□□ -2.15
VPS8-215ENST00000460158 NHSL1Q5SYE7 1610 aa1.65□□□□□ -2.15
VPS8-215ENST00000460158 EIF2AK4Q9P2K8 1649 aaKnown RBP1.65□□□□□ -2.15
VPS8-215ENST00000460158 ZNF831Q5JPB2 1677 aa1.64□□□□□ -2.15
VPS8-215ENST00000460158 CD163L1Q9NR16 1453 aa1.64□□□□□ -2.15
VPS8-215ENST00000460158 LRRC37A2A6NM11 1700 aa1.64□□□□□ -2.15
VPS8-215ENST00000460158 POLR1AO95602 1720 aaPredicted RBP1.64□□□□□ -2.15
VPS8-215ENST00000460158 A0A087WTM6 91 aa1.64□□□□□ -2.15
VPS8-215ENST00000460158 TRBV7-4A0A0J9YYF1 115 aa1.64□□□□□ -2.15
VPS8-215ENST00000460158 LINC00208Q96KT6 92 aa1.64□□□□□ -2.15
VPS8-215ENST00000460158 LINC00846Q9NV44 126 aa1.64□□□□□ -2.15
VPS8-215ENST00000460158 LRP6O75581 1613 aa1.64□□□□□ -2.15
VPS8-215ENST00000460158 BIVM-ERCC5R4GMW8 1640 aa1.64□□□□□ -2.15
VPS8-215ENST00000460158 C3P01024 1663 aa1.64□□□□□ -2.15
VPS8-215ENST00000460158 LRRC7Q96NW7 1537 aa1.63□□□□□ -2.15
VPS8-215ENST00000460158 TRGV2A0A075B6R0 118 aa1.63□□□□□ -2.15
VPS8-215ENST00000460158 TRGV1A0A0A0MS02 117 aa1.63□□□□□ -2.15
VPS8-215ENST00000460158 SNRPGP15A8MWD9 76 aa1.63□□□□□ -2.15
VPS8-215ENST00000460158 H0Y9P7 68 aa1.63□□□□□ -2.15
VPS8-215ENST00000460158 NDUFB1O75438 58 aa1.63□□□□□ -2.15
VPS8-215ENST00000460158 IGKV4-1P06312 121 aa1.63□□□□□ -2.15
VPS8-215ENST00000460158 ACYP2P14621 99 aa1.63□□□□□ -2.15
VPS8-215ENST00000460158 ZNF137PP52743 207 aa1.63□□□□□ -2.15
VPS8-215ENST00000460158 GDF5OSQ5U4N7 250 aa1.63□□□□□ -2.15
VPS8-215ENST00000460158 LY75O60449 1722 aa1.63□□□□□ -2.15
VPS8-215ENST00000460158 PLXNB2O15031 1838 aa1.62□□□□□ -2.15
VPS8-215ENST00000460158 S100A3P33764 101 aa1.62□□□□□ -2.15
VPS8-215ENST00000460158 CAV3P56539 151 aa1.62□□□□□ -2.15
VPS8-215ENST00000460158 Q6ZQY7 126 aa1.62□□□□□ -2.15
VPS8-215ENST00000460158 SPRR4Q96PI1 79 aa1.62□□□□□ -2.15
VPS8-215ENST00000460158 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
VPS8-215ENST00000460158 TRIOBPQ9H2D6 2365 aa1.62□□□□□ -2.15
VPS8-215ENST00000460158 TJP1Q07157 1748 aa1.61□□□□□ -2.15
VPS8-215ENST00000460158 ANKRD50Q9ULJ7 1429 aa1.61□□□□□ -2.15
VPS8-215ENST00000460158 BRD3OSQ6XYD6 125 aa1.61□□□□□ -2.15
VPS8-215ENST00000460158 Q96NJ1 140 aa1.61□□□□□ -2.15
VPS8-215ENST00000460158 ABCA5Q8WWZ7 1642 aa1.61□□□□□ -2.15
VPS8-215ENST00000460158 E9PCH4 1651 aa1.61□□□□□ -2.15
VPS8-215ENST00000460158 CPS1P31327 1500 aa1.61□□□□□ -2.15
VPS8-215ENST00000460158 QSER1Q2KHR3 1735 aa1.6□□□□□ -2.15
VPS8-215ENST00000460158 DDX60LQ5H9U9 1706 aaKnown RBP1.6□□□□□ -2.15
VPS8-215ENST00000460158 HCRTO43612 131 aa1.6□□□□□ -2.15
VPS8-215ENST00000460158 C10orf113Q5VZT2 155 aa1.6□□□□□ -2.15
VPS8-215ENST00000460158 Q6ZRN7 208 aaPredicted RBP1.6□□□□□ -2.15
VPS8-215ENST00000460158 WFDC9Q8NEX5 89 aa1.6□□□□□ -2.15
VPS8-215ENST00000460158 TMEM263Q8WUH6 116 aaKnown RBP1.6□□□□□ -2.15
VPS8-215ENST00000460158 PLAC8Q9NZF1 115 aa1.6□□□□□ -2.15
VPS8-215ENST00000460158 ABCA1O95477 2261 aa1.6□□□□□ -2.15
VPS8-215ENST00000460158 DOT1LQ8TEK3 1739 aa1.6□□□□□ -2.15
VPS8-215ENST00000460158 ICE1Q9Y2F5 2266 aa1.59□□□□□ -2.15
VPS8-215ENST00000460158 LINC01549A6NIU2 74 aa1.59□□□□□ -2.15
VPS8-215ENST00000460158 IFI6P09912 130 aa1.59□□□□□ -2.15
VPS8-215ENST00000460158 NREPQ16612 68 aa1.59□□□□□ -2.15
VPS8-215ENST00000460158 CCL19Q99731 98 aa1.59□□□□□ -2.15
VPS8-215ENST00000460158 IQGAP2Q13576 1575 aa1.59□□□□□ -2.16
VPS8-215ENST00000460158 SAMD9Q5K651 1589 aa1.59□□□□□ -2.16
VPS8-215ENST00000460158 NRXN3Q9Y4C0 1643 aa1.58□□□□□ -2.16
VPS8-215ENST00000460158 F5P12259 2224 aa1.58□□□□□ -2.16
VPS8-215ENST00000460158 ABCC6O95255 1503 aa1.58□□□□□ -2.16
VPS8-215ENST00000460158 ZMYM4Q5VZL5 1548 aa1.58□□□□□ -2.16
VPS8-215ENST00000460158 TRAV21A0A0B4J279 112 aa1.58□□□□□ -2.16
VPS8-215ENST00000460158 SPINK7P58062 85 aa1.58□□□□□ -2.16
VPS8-215ENST00000460158 SPATA8Q6RVD6 105 aa1.58□□□□□ -2.16
VPS8-215ENST00000460158 A0A0G2JMZ2 1700 aa1.57□□□□□ -2.16
VPS8-215ENST00000460158 HIVEP2P31629 2446 aa1.57□□□□□ -2.16
VPS8-215ENST00000460158 TRBV6-1A0A0K0K1D8 114 aa1.57□□□□□ -2.16
VPS8-215ENST00000460158 DEFB112Q30KQ8 113 aa1.57□□□□□ -2.16
VPS8-215ENST00000460158 OBSCN-AS1Q96MR7 158 aa1.57□□□□□ -2.16
VPS8-215ENST00000460158 GAFA1Q96PS6 74 aa1.57□□□□□ -2.16
VPS8-215ENST00000460158 ADCY10Q96PN6 1610 aa1.57□□□□□ -2.16
VPS8-215ENST00000460158 CADP27708 2225 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms