RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 GYPEP15421 78 aa10.49□□□□□ -0.73
C9orf3-204ENST00000424143 MYO9AB2RTY4 2548 aa10.49□□□□□ -0.73
C9orf3-204ENST00000424143 COL12A1Q99715 3063 aa10.49□□□□□ -0.73
C9orf3-204ENST00000424143 FLNCQ14315 2725 aa10.48□□□□□ -0.73
C9orf3-204ENST00000424143 IGKV3D-7A0A0C4DH55 119 aa10.47□□□□□ -0.73
C9orf3-204ENST00000424143 hADV29S1A0JD25 119 aa10.47□□□□□ -0.73
C9orf3-204ENST00000424143 LYRM9A8MSI8 78 aa10.47□□□□□ -0.73
C9orf3-204ENST00000424143 USP17L23D6RBM5 183 aa10.47□□□□□ -0.73
C9orf3-204ENST00000424143 XCL1P47992 114 aa10.47□□□□□ -0.73
C9orf3-204ENST00000424143 WFDC10AQ9H1F0 79 aa10.47□□□□□ -0.73
C9orf3-204ENST00000424143 ACACBO00763 2458 aa10.46□□□□□ -0.73
C9orf3-204ENST00000424143 NDUFC2-KCTD14E9PQ53 114 aa10.46□□□□□ -0.74
C9orf3-204ENST00000424143 SLPIP03973 132 aa10.46□□□□□ -0.74
C9orf3-204ENST00000424143 CFAP161Q6P656 301 aa10.46□□□□□ -0.74
C9orf3-204ENST00000424143 C3orf56Q8N813 242 aa10.46□□□□□ -0.74
C9orf3-204ENST00000424143 CRYBG3Q68DQ2 2970 aa10.45□□□□□ -0.74
C9orf3-204ENST00000424143 LOC110117498A0A087WWA1 95 aa10.45□□□□□ -0.74
C9orf3-204ENST00000424143 ZANQ9Y493 2812 aa10.45□□□□□ -0.74
C9orf3-204ENST00000424143 LINC00575Q6W349 94 aa10.44□□□□□ -0.74
C9orf3-204ENST00000424143 IGSF10Q6WRI0 2623 aa10.44□□□□□ -0.74
C9orf3-204ENST00000424143 PLA2G2AP14555 144 aa10.44□□□□□ -0.74
C9orf3-204ENST00000424143 PDE6GP18545 87 aa10.44□□□□□ -0.74
C9orf3-204ENST00000424143 X6R8D5 127 aa10.44□□□□□ -0.74
C9orf3-204ENST00000424143 DEFB130BP0DP73 79 aa10.43□□□□□ -0.74
C9orf3-204ENST00000424143 DEFB130AP0DP74 79 aa10.43□□□□□ -0.74
C9orf3-204ENST00000424143 UTP20O75691 2785 aaKnown RBP10.42□□□□□ -0.74
C9orf3-204ENST00000424143 NAV2Q8IVL1 2488 aa10.42□□□□□ -0.74
C9orf3-204ENST00000424143 A0A0J9YWU9 116 aa10.42□□□□□ -0.74
C9orf3-204ENST00000424143 IGHV4-30-4P0DP06 118 aa10.42□□□□□ -0.74
C9orf3-204ENST00000424143 CHCHD10Q8WYQ3 142 aaPredicted RBP10.42□□□□□ -0.74
C9orf3-204ENST00000424143 UBL5Q9BZL1 73 aa10.42□□□□□ -0.74
C9orf3-204ENST00000424143 NOTCH3Q9UM47 2321 aa10.41□□□□□ -0.74
C9orf3-204ENST00000424143 C2CD3Q4AC94 2353 aa10.41□□□□□ -0.74
C9orf3-204ENST00000424143 ZNF561-AS1K7EIQ3 104 aa10.41□□□□□ -0.74
C9orf3-204ENST00000424143 C6orf223Q8N319 242 aa10.41□□□□□ -0.74
C9orf3-204ENST00000424143 ZNF843Q8N446 348 aa10.41□□□□□ -0.74
C9orf3-204ENST00000424143 FBN2P35556 2912 aa10.41□□□□□ -0.74
C9orf3-204ENST00000424143 MAP1AP78559 2803 aaPredicted RBP10.4□□□□□ -0.74
C9orf3-204ENST00000424143 TEX15Q9BXT5 2789 aa10.4□□□□□ -0.74
C9orf3-204ENST00000424143 PTPN13Q12923 2485 aa10.4□□□□□ -0.74
C9orf3-204ENST00000424143 GVQW2A0A096LPI5 108 aaPredicted RBP10.4□□□□□ -0.75
C9orf3-204ENST00000424143 KRTAP1-1Q07627 177 aa10.4□□□□□ -0.75
C9orf3-204ENST00000424143 CHD6Q8TD26 2715 aa10.39□□□□□ -0.75
C9orf3-204ENST00000424143 MYO18BQ8IUG5 2567 aa10.39□□□□□ -0.75
C9orf3-204ENST00000424143 WNK1Q9H4A3 2382 aa10.39□□□□□ -0.75
C9orf3-204ENST00000424143 LINC00269Q8N2A0 174 aa10.39□□□□□ -0.75
C9orf3-204ENST00000424143 C11orf68Q9H3H3 251 aaKnown RBP10.39□□□□□ -0.75
C9orf3-204ENST00000424143 AKAP9Q99996 3911 aa10.39□□□□□ -0.75
C9orf3-204ENST00000424143 GHRHP01286 108 aa10.38□□□□□ -0.75
C9orf3-204ENST00000424143 IGLV6-57P01721 117 aa10.38□□□□□ -0.75
C9orf3-204ENST00000424143 REG3AQ06141 175 aa10.38□□□□□ -0.75
C9orf3-204ENST00000424143 Q6ZQT0 140 aa10.38□□□□□ -0.75
C9orf3-204ENST00000424143 WFDC11Q8NEX6 87 aa10.38□□□□□ -0.75
C9orf3-204ENST00000424143 BBC3Q96PG8 261 aaPredicted RBP10.38□□□□□ -0.75
C9orf3-204ENST00000424143 POLQO75417 2590 aa10.37□□□□□ -0.75
C9orf3-204ENST00000424143 A0A087WVE0 104 aa10.37□□□□□ -0.75
C9orf3-204ENST00000424143 HILS1P60008 231 aa10.37□□□□□ -0.75
C9orf3-204ENST00000424143 RBM3P98179 157 aaKnown RBP10.37□□□□□ -0.75
C9orf3-204ENST00000424143 C6orf99Q4VX62 202 aa10.37□□□□□ -0.75
C9orf3-204ENST00000424143 C9orf66Q5T8R8 295 aa10.37□□□□□ -0.75
C9orf3-204ENST00000424143 DPH3Q96FX2 82 aa10.37□□□□□ -0.75
C9orf3-204ENST00000424143 LINC00482Q8N8I6 264 aa10.36□□□□□ -0.75
C9orf3-204ENST00000424143 PRB1P04280 392 aa10.36□□□□□ -0.75
C9orf3-204ENST00000424143 PRR3P79522 188 aaKnown RBP10.36□□□□□ -0.75
C9orf3-204ENST00000424143 TRBV7-6A0A0J9YX20 115 aa10.35□□□□□ -0.75
C9orf3-204ENST00000424143 UBR5O95071 2799 aaPredicted RBP10.34□□□□□ -0.75
C9orf3-204ENST00000424143 FAM208BQ5VWN6 2430 aa10.34□□□□□ -0.75
C9orf3-204ENST00000424143 FAM19A5Q7Z5A7 132 aaPredicted RBP10.34□□□□□ -0.75
C9orf3-204ENST00000424143 TLN2Q9Y4G6 2542 aa10.34□□□□□ -0.75
C9orf3-204ENST00000424143 LOC107984640A0A0U1RRK4 108 aa10.33□□□□□ -0.76
C9orf3-204ENST00000424143 PRR34Q9NV39 138 aa10.33□□□□□ -0.76
C9orf3-204ENST00000424143 ANGP03950 147 aaKnown RBP10.33□□□□□ -0.76
C9orf3-204ENST00000424143 CXCL6P80162 114 aa10.33□□□□□ -0.76
C9orf3-204ENST00000424143 LELP1Q5T871 98 aa10.33□□□□□ -0.76
C9orf3-204ENST00000424143 CYSTM1Q9H1C7 97 aa10.33□□□□□ -0.76
C9orf3-204ENST00000424143 TRAV7A0A075B6U4 112 aa10.32□□□□□ -0.76
C9orf3-204ENST00000424143 CLPSL2Q6UWE3 100 aa10.32□□□□□ -0.76
C9orf3-204ENST00000424143 Q8NDZ9 215 aa10.32□□□□□ -0.76
C9orf3-204ENST00000424143 SPAG11BQ08648 103 aa10.31□□□□□ -0.76
C9orf3-204ENST00000424143 C5orf47Q569G3 176 aa10.31□□□□□ -0.76
C9orf3-204ENST00000424143 ENHOQ6UWT2 76 aa10.31□□□□□ -0.76
C9orf3-204ENST00000424143 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.31□□□□□ -0.76
C9orf3-204ENST00000424143 SETXQ7Z333 2677 aaKnown RBP10.31□□□□□ -0.76
C9orf3-204ENST00000424143 APOC4P55056 127 aa10.29□□□□□ -0.76
C9orf3-204ENST00000424143 FAM19A1Q7Z5A9 133 aa10.29□□□□□ -0.76
C9orf3-204ENST00000424143 LRRK2Q5S007 2527 aa10.29□□□□□ -0.76
C9orf3-204ENST00000424143 EPG5Q9HCE0 2579 aa10.29□□□□□ -0.76
C9orf3-204ENST00000424143 C9orf116Q5BN46 136 aaPredicted RBP10.29□□□□□ -0.76
C9orf3-204ENST00000424143 DSCR8Q96T75 97 aa10.29□□□□□ -0.76
C9orf3-204ENST00000424143 MIFP14174 115 aa10.28□□□□□ -0.76
C9orf3-204ENST00000424143 DAD1P61803 113 aa10.28□□□□□ -0.76
C9orf3-204ENST00000424143 UNQ6190/PRO20217Q6UXQ8 127 aa10.28□□□□□ -0.76
C9orf3-204ENST00000424143 CYSRT1A8MQ03 144 aa10.27□□□□□ -0.77
C9orf3-204ENST00000424143 ZNF462Q96JM2 2506 aa10.27□□□□□ -0.77
C9orf3-204ENST00000424143 ITPR3Q14573 2671 aa10.27□□□□□ -0.77
C9orf3-204ENST00000424143 JMJD1CQ15652 2540 aa10.27□□□□□ -0.77
C9orf3-204ENST00000424143 USP24Q9UPU5 2620 aa10.26□□□□□ -0.77
C9orf3-204ENST00000424143 TRAV23DV6A0A075B6W5 121 aa10.26□□□□□ -0.77
C9orf3-204ENST00000424143 LINC01547P58512 204 aaPredicted RBP10.26□□□□□ -0.77
C9orf3-204ENST00000424143 C10orf25Q5T742 122 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms