RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 PROK1P58294 105 aa3.55□□□□□ -1.84
ITGB1-205ENST00000423113 KPRPQ5T749 579 aaPredicted RBP3.55□□□□□ -1.84
ITGB1-205ENST00000423113 DYNLRB2Q8TF09 96 aa3.55□□□□□ -1.84
ITGB1-205ENST00000423113 DNHD1Q96M86 4753 aa3.55□□□□□ -1.84
ITGB1-205ENST00000423113 FAM222AQ5U5X8 452 aa3.55□□□□□ -1.84
ITGB1-205ENST00000423113 C20orf203Q8NBC4 194 aa3.55□□□□□ -1.84
ITGB1-205ENST00000423113 POLQO75417 2590 aa3.54□□□□□ -1.84
ITGB1-205ENST00000423113 IGLV4-3A0A075B6K6 122 aa3.54□□□□□ -1.84
ITGB1-205ENST00000423113 A0A0J9YX75 114 aa3.54□□□□□ -1.84
ITGB1-205ENST00000423113 MIFP14174 115 aa3.54□□□□□ -1.84
ITGB1-205ENST00000423113 DEFB112Q30KQ8 113 aa3.54□□□□□ -1.84
ITGB1-205ENST00000423113 SCXQ7RTU7 201 aa3.54□□□□□ -1.84
ITGB1-205ENST00000423113 LINC00528Q8N1L1 170 aa3.54□□□□□ -1.84
ITGB1-205ENST00000423113 AMELXQ99217 191 aa3.54□□□□□ -1.84
ITGB1-205ENST00000423113 CCDC168Q8NDH2 2452 aa3.54□□□□□ -1.84
ITGB1-205ENST00000423113 HIVEP2P31629 2446 aa3.54□□□□□ -1.84
ITGB1-205ENST00000423113 SPG11Q96JI7 2443 aa3.54□□□□□ -1.84
ITGB1-205ENST00000423113 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.54□□□□□ -1.84
ITGB1-205ENST00000423113 IGHV3OR16-10A0A075B7F0 116 aa3.54□□□□□ -1.84
ITGB1-205ENST00000423113 IGKV2-29A2NJV5 120 aaPredicted RBP3.54□□□□□ -1.84
ITGB1-205ENST00000423113 H0YGX0 51 aa3.54□□□□□ -1.84
ITGB1-205ENST00000423113 NDUFC1O43677 76 aa3.54□□□□□ -1.84
ITGB1-205ENST00000423113 ATP5EP56381 51 aaPredicted RBP3.54□□□□□ -1.84
ITGB1-205ENST00000423113 C15orf32Q32M92 178 aa3.54□□□□□ -1.84
ITGB1-205ENST00000423113 ATP5EP2Q5VTU8 51 aa3.54□□□□□ -1.84
ITGB1-205ENST00000423113 FP248Q71RG6 208 aaPredicted RBP3.54□□□□□ -1.84
ITGB1-205ENST00000423113 IGHV3-38A0A0C4DH36 116 aa3.54□□□□□ -1.84
ITGB1-205ENST00000423113 H7BZZ5 65 aa3.54□□□□□ -1.84
ITGB1-205ENST00000423113 KRTAP24-1Q3LI83 254 aa3.54□□□□□ -1.84
ITGB1-205ENST00000423113 SND1-IT1Q9HBX3 110 aa3.54□□□□□ -1.84
ITGB1-205ENST00000423113 SMAD5-AS1Q9Y6J3 95 aa3.54□□□□□ -1.84
ITGB1-205ENST00000423113 IGHV7-81A0A0B4J1V7 117 aa3.53□□□□□ -1.84
ITGB1-205ENST00000423113 POLR2KP53803 58 aaKnown RBP3.53□□□□□ -1.84
ITGB1-205ENST00000423113 MIR7-3HGQ8N6C7 128 aa3.53□□□□□ -1.84
ITGB1-205ENST00000423113 CDKN2A-AS1Q9UH64 79 aa3.53□□□□□ -1.84
ITGB1-205ENST00000423113 ESRGQ1W209 222 aa3.53□□□□□ -1.84
ITGB1-205ENST00000423113 FAM218AQ96MZ4 157 aa3.53□□□□□ -1.84
ITGB1-205ENST00000423113 IGLV11-55A0A075B6I3 123 aa3.53□□□□□ -1.85
ITGB1-205ENST00000423113 PLAC8L1A1L4L8 177 aa3.52□□□□□ -1.85
ITGB1-205ENST00000423113 F8W735 103 aaPredicted RBP3.52□□□□□ -1.85
ITGB1-205ENST00000423113 JMJD7-PLA2G4BH0Y9G9 81 aa3.52□□□□□ -1.85
ITGB1-205ENST00000423113 GPHB5Q86YW7 130 aa3.52□□□□□ -1.85
ITGB1-205ENST00000423113 LINC01600Q96MT4 127 aa3.52□□□□□ -1.85
ITGB1-205ENST00000423113 IGHV4-4A0A075B6R2 117 aa3.52□□□□□ -1.85
ITGB1-205ENST00000423113 CCL24O00175 119 aa3.52□□□□□ -1.85
ITGB1-205ENST00000423113 CTSGP08311 255 aa3.52□□□□□ -1.85
ITGB1-205ENST00000423113 PRR9Q5T870 116 aa3.52□□□□□ -1.85
ITGB1-205ENST00000423113 COX8CQ7Z4L0 72 aa3.52□□□□□ -1.85
ITGB1-205ENST00000423113 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.52□□□□□ -1.85
ITGB1-205ENST00000423113 HUWE1Q7Z6Z7 4374 aaKnown RBP3.52□□□□□ -1.85
ITGB1-205ENST00000423113 MDFIQ99750 246 aa3.52□□□□□ -1.85
ITGB1-205ENST00000423113 TENM1Q9UKZ4 2725 aa3.51□□□□□ -1.85
ITGB1-205ENST00000423113 A0A087WYN8 130 aa3.51□□□□□ -1.85
ITGB1-205ENST00000423113 CLPSL1A2RUU4 121 aa3.51□□□□□ -1.85
ITGB1-205ENST00000423113 KRTAP10-3P60369 221 aa3.51□□□□□ -1.85
ITGB1-205ENST00000423113 PRR4Q16378 134 aa3.51□□□□□ -1.85
ITGB1-205ENST00000423113 C9orf47Q6ZRZ4 202 aa3.51□□□□□ -1.85
ITGB1-205ENST00000423113 FN1P02751 2386 aaKnown RBP3.51□□□□□ -1.85
ITGB1-205ENST00000423113 ALMS1Q8TCU4 4167 aa3.51□□□□□ -1.85
ITGB1-205ENST00000423113 TEP1Q99973 2627 aaKnown RBP3.5□□□□□ -1.85
ITGB1-205ENST00000423113 IGHV4OR15-8A0A075B7B6 117 aa3.5□□□□□ -1.85
ITGB1-205ENST00000423113 A0A087WW49 117 aa3.5□□□□□ -1.85
ITGB1-205ENST00000423113 A8MTW9 85 aa3.5□□□□□ -1.85
ITGB1-205ENST00000423113 NDUFA1O15239 70 aa3.5□□□□□ -1.85
ITGB1-205ENST00000423113 IGHV4-59P01825 116 aa3.5□□□□□ -1.85
ITGB1-205ENST00000423113 GYPEP15421 78 aa3.5□□□□□ -1.85
ITGB1-205ENST00000423113 NANOS2P60321 138 aaKnown RBP3.5□□□□□ -1.85
ITGB1-205ENST00000423113 BRD3OSQ6XYD6 125 aa3.5□□□□□ -1.85
ITGB1-205ENST00000423113 SMIM11BQ8TCY0 68 aa3.5□□□□□ -1.85
ITGB1-205ENST00000423113 COX7B2Q8TF08 81 aa3.5□□□□□ -1.85
ITGB1-205ENST00000423113 C4orf3Q8WVX3 66 aa3.5□□□□□ -1.85
ITGB1-205ENST00000423113 LITAFQ99732 161 aa3.5□□□□□ -1.85
ITGB1-205ENST00000423113 FRAS1Q86XX4 4008 aa3.5□□□□□ -1.85
ITGB1-205ENST00000423113 TRAV10A0A0B4J240 114 aa3.5□□□□□ -1.85
ITGB1-205ENST00000423113 UBE2L6O14933 153 aa3.5□□□□□ -1.85
ITGB1-205ENST00000423113 IGHV3-11P01762 117 aa3.5□□□□□ -1.85
ITGB1-205ENST00000423113 LYPD5Q6UWN5 251 aa3.5□□□□□ -1.85
ITGB1-205ENST00000423113 APRG1Q8IVJ8 170 aa3.5□□□□□ -1.85
ITGB1-205ENST00000423113 LENEPQ9Y5L5 61 aa3.5□□□□□ -1.85
ITGB1-205ENST00000423113 TNP2Q05952 138 aa3.49□□□□□ -1.85
ITGB1-205ENST00000423113 NREPQ16612 68 aa3.49□□□□□ -1.85
ITGB1-205ENST00000423113 Q8N3U1 123 aa3.49□□□□□ -1.85
ITGB1-205ENST00000423113 TMEM254Q8TBM7 123 aa3.49□□□□□ -1.85
ITGB1-205ENST00000423113 USMG5Q96IX5 58 aa3.49□□□□□ -1.85
ITGB1-205ENST00000423113 UBE2E2Q96LR5 201 aa3.49□□□□□ -1.85
ITGB1-205ENST00000423113 A0A0A0MQY5 61 aa3.49□□□□□ -1.85
ITGB1-205ENST00000423113 IGHV3-16A0A0C4DH30 117 aa3.49□□□□□ -1.85
ITGB1-205ENST00000423113 TRBV10-1A0A0K0K1A3 114 aa3.49□□□□□ -1.85
ITGB1-205ENST00000423113 CHKB-CPT1BH3BT56 60 aa3.49□□□□□ -1.85
ITGB1-205ENST00000423113 RNASE3P12724 160 aaKnown RBP3.49□□□□□ -1.85
ITGB1-205ENST00000423113 EGFEM1PQ0D2K5 195 aa3.49□□□□□ -1.85
ITGB1-205ENST00000423113 LINC01006Q8NI28 216 aa3.49□□□□□ -1.85
ITGB1-205ENST00000423113 H3BUX3 64 aa3.49□□□□□ -1.85
ITGB1-205ENST00000423113 C9orf129Q5T035 196 aaKnown RBP3.49□□□□□ -1.85
ITGB1-205ENST00000423113 ZFAND2AQ8N6M9 145 aa3.49□□□□□ -1.85
ITGB1-205ENST00000423113 NIPBLQ6KC79 2804 aaeCLIP3.49□□□□□ -1.852e-6■■■■■ 44.5
ITGB1-205ENST00000423113 MAP1AP78559 2803 aaPredicted RBP3.48□□□□□ -1.85
ITGB1-205ENST00000423113 TMEM256-PLSCR3K7ERE1 68 aa3.48□□□□□ -1.85
ITGB1-205ENST00000423113 M0QY20 66 aa3.48□□□□□ -1.85
ITGB1-205ENST00000423113 PRYO14603 147 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms