RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 Q8N2B8 174 aa2.36□□□□□ -2.03
HMGB3P23-201ENST00000414981 MUC7Q8TAX7 377 aa2.36□□□□□ -2.03
HMGB3P23-201ENST00000414981 ZNF625Q96I27 306 aaPredicted RBP2.36□□□□□ -2.03
HMGB3P23-201ENST00000414981 CHCHD7Q9BUK0 85 aa2.36□□□□□ -2.03
HMGB3P23-201ENST00000414981 KLK5Q9Y337 293 aaPredicted RBP2.36□□□□□ -2.03
HMGB3P23-201ENST00000414981 SVILO95425 2214 aa2.36□□□□□ -2.03
HMGB3P23-201ENST00000414981 IGHV3-66A0A0C4DH42 116 aa2.35□□□□□ -2.03
HMGB3P23-201ENST00000414981 G3V318 75 aa2.35□□□□□ -2.03
HMGB3P23-201ENST00000414981 NDUFC1O43677 76 aa2.35□□□□□ -2.03
HMGB3P23-201ENST00000414981 PRM2P04554 102 aa2.35□□□□□ -2.03
HMGB3P23-201ENST00000414981 ATP5EP56381 51 aaPredicted RBP2.35□□□□□ -2.03
HMGB3P23-201ENST00000414981 UBE2BP63146 152 aa2.35□□□□□ -2.03
HMGB3P23-201ENST00000414981 C3orf56Q8N813 242 aa2.35□□□□□ -2.03
HMGB3P23-201ENST00000414981 SMCR5Q8TEV8 140 aa2.35□□□□□ -2.03
HMGB3P23-201ENST00000414981 CLEC2BQ92478 149 aa2.35□□□□□ -2.03
HMGB3P23-201ENST00000414981 UPK3BQ9BT76 320 aa2.35□□□□□ -2.03
HMGB3P23-201ENST00000414981 C8orf17Q9NRJ1 99 aa2.35□□□□□ -2.03
HMGB3P23-201ENST00000414981 URB1O60287 2271 aaKnown RBP2.35□□□□□ -2.03
HMGB3P23-201ENST00000414981 REV3LO60673 3130 aa2.35□□□□□ -2.03
HMGB3P23-201ENST00000414981 MUC4Q99102 2169 aa2.34□□□□□ -2.03
HMGB3P23-201ENST00000414981 LAMA3Q16787 3333 aa2.34□□□□□ -2.03
HMGB3P23-201ENST00000414981 ICE1Q9Y2F5 2266 aa2.34□□□□□ -2.03
HMGB3P23-201ENST00000414981 IGHV3OR16-8A0A075B7F1 116 aa2.34□□□□□ -2.03
HMGB3P23-201ENST00000414981 TRAV12-3A0A0B4J271 114 aa2.34□□□□□ -2.03
HMGB3P23-201ENST00000414981 A6NDX4 124 aa2.34□□□□□ -2.03
HMGB3P23-201ENST00000414981 IBA57-AS1B1ANH7 110 aa2.34□□□□□ -2.03
HMGB3P23-201ENST00000414981 LYNX1G3V0Z9 82 aa2.34□□□□□ -2.03
HMGB3P23-201ENST00000414981 CRPP02741 224 aa2.34□□□□□ -2.03
HMGB3P23-201ENST00000414981 CCKP06307 115 aa2.34□□□□□ -2.03
HMGB3P23-201ENST00000414981 LYNX1P0DP58 116 aa2.34□□□□□ -2.03
HMGB3P23-201ENST00000414981 PDE6GP18545 87 aa2.34□□□□□ -2.03
HMGB3P23-201ENST00000414981 FAM74A4Q5TZK3 123 aa2.34□□□□□ -2.03
HMGB3P23-201ENST00000414981 C7orf65Q6ZTY9 151 aa2.34□□□□□ -2.03
HMGB3P23-201ENST00000414981 FP248Q71RG6 208 aaPredicted RBP2.34□□□□□ -2.03
HMGB3P23-201ENST00000414981 ADM2Q7Z4H4 148 aa2.34□□□□□ -2.03
HMGB3P23-201ENST00000414981 DIRC1Q969H9 104 aa2.34□□□□□ -2.03
HMGB3P23-201ENST00000414981 CDKN2A-AS1Q9UH64 79 aa2.34□□□□□ -2.03
HMGB3P23-201ENST00000414981 C22orf24Q9Y442 160 aa2.34□□□□□ -2.03
HMGB3P23-201ENST00000414981 TECTAO75443 2155 aa2.34□□□□□ -2.04
HMGB3P23-201ENST00000414981 IGHV3-64A0A075B6Q5 118 aa2.33□□□□□ -2.04
HMGB3P23-201ENST00000414981 IGHV3-49A0A0A0MS15 119 aa2.33□□□□□ -2.04
HMGB3P23-201ENST00000414981 PANO1I0J062 215 aa2.33□□□□□ -2.04
HMGB3P23-201ENST00000414981 IGHV3-11P01762 117 aa2.33□□□□□ -2.04
HMGB3P23-201ENST00000414981 PRB4P10163 310 aaPredicted RBP2.33□□□□□ -2.04
HMGB3P23-201ENST00000414981 NPC2P61916 151 aa2.33□□□□□ -2.04
HMGB3P23-201ENST00000414981 DEFB124Q8NES8 71 aa2.33□□□□□ -2.04
HMGB3P23-201ENST00000414981 DSCR8Q96T75 97 aa2.33□□□□□ -2.04
HMGB3P23-201ENST00000414981 SERP1Q9Y6X1 66 aa2.33□□□□□ -2.04
HMGB3P23-201ENST00000414981 CUL9Q8IWT3 2517 aa2.33□□□□□ -2.04
HMGB3P23-201ENST00000414981 WNK2Q9Y3S1 2297 aa2.33□□□□□ -2.04
HMGB3P23-201ENST00000414981 SZT2Q5T011 3432 aa2.32□□□□□ -2.04
HMGB3P23-201ENST00000414981 LAMA1P25391 3075 aa2.32□□□□□ -2.04
HMGB3P23-201ENST00000414981 TRAV7A0A075B6U4 112 aa2.32□□□□□ -2.04
HMGB3P23-201ENST00000414981 ERC2-IT1O76042 136 aa2.32□□□□□ -2.04
HMGB3P23-201ENST00000414981 PRB3Q04118 309 aaPredicted RBP2.32□□□□□ -2.04
HMGB3P23-201ENST00000414981 KLKP1Q107X0 134 aa2.32□□□□□ -2.04
HMGB3P23-201ENST00000414981 COX17Q14061 63 aa2.32□□□□□ -2.04
HMGB3P23-201ENST00000414981 SS18Q15532 418 aa2.32□□□□□ -2.04
HMGB3P23-201ENST00000414981 RNASE13Q5GAN3 156 aaKnown RBP2.32□□□□□ -2.04
HMGB3P23-201ENST00000414981 LINC01560Q8TB33 94 aa2.32□□□□□ -2.04
HMGB3P23-201ENST00000414981 UBL5Q9BZL1 73 aa2.32□□□□□ -2.04
HMGB3P23-201ENST00000414981 CDC42SE2Q9NRR3 84 aa2.32□□□□□ -2.04
HMGB3P23-201ENST00000414981 LINC00846Q9NV44 126 aa2.32□□□□□ -2.04
HMGB3P23-201ENST00000414981 ORMDL1Q9P0S3 153 aa2.32□□□□□ -2.04
HMGB3P23-201ENST00000414981 CACNA1BQ00975 2339 aa2.31□□□□□ -2.04
HMGB3P23-201ENST00000414981 XIRP2A4UGR9 3374 aa2.31□□□□□ -2.04
HMGB3P23-201ENST00000414981 CDH23Q9H251 3354 aa2.31□□□□□ -2.04
HMGB3P23-201ENST00000414981 LOC110117498A0A087WWA1 95 aa2.31□□□□□ -2.04
HMGB3P23-201ENST00000414981 SPINK13Q1W4C9 94 aa2.31□□□□□ -2.04
HMGB3P23-201ENST00000414981 LUZP6Q538Z0 58 aa2.31□□□□□ -2.04
HMGB3P23-201ENST00000414981 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
HMGB3P23-201ENST00000414981 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
HMGB3P23-201ENST00000414981 SOSTDC1Q6X4U4 206 aa2.31□□□□□ -2.04
HMGB3P23-201ENST00000414981 SMIM11BQ8TCY0 68 aa2.31□□□□□ -2.04
HMGB3P23-201ENST00000414981 C10orf105Q8TEF2 133 aa2.31□□□□□ -2.04
HMGB3P23-201ENST00000414981 IGKV2-28A0A075B6P5 120 aa2.3□□□□□ -2.04
HMGB3P23-201ENST00000414981 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P23-201ENST00000414981 A0A1B0GVX0 72 aa2.3□□□□□ -2.04
HMGB3P23-201ENST00000414981 A0A1B0GW54 56 aa2.3□□□□□ -2.04
HMGB3P23-201ENST00000414981 TRBV6-4A0A1B0GX49 114 aa2.3□□□□□ -2.04
HMGB3P23-201ENST00000414981 IGKV2-29A2NJV5 120 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P23-201ENST00000414981 INSP01308 110 aa2.3□□□□□ -2.04
HMGB3P23-201ENST00000414981 IGKV2D-28P01615 120 aa2.3□□□□□ -2.04
HMGB3P23-201ENST00000414981 COX6A2Q02221 97 aa2.3□□□□□ -2.04
HMGB3P23-201ENST00000414981 Q8N9L7 120 aa2.3□□□□□ -2.04
HMGB3P23-201ENST00000414981 COX7B2Q8TF08 81 aa2.3□□□□□ -2.04
HMGB3P23-201ENST00000414981 CAMK2N2Q96S95 79 aa2.3□□□□□ -2.04
HMGB3P23-201ENST00000414981 ARHGAP32A7KAX9 2087 aa2.3□□□□□ -2.04
HMGB3P23-201ENST00000414981 ABCA4P78363 2273 aa2.3□□□□□ -2.04
HMGB3P23-201ENST00000414981 VCANP13611 3396 aa2.29□□□□□ -2.04
HMGB3P23-201ENST00000414981 CEP290O15078 2479 aa2.29□□□□□ -2.04
HMGB3P23-201ENST00000414981 A6NN06 94 aa2.29□□□□□ -2.04
HMGB3P23-201ENST00000414981 H3BUX3 64 aa2.29□□□□□ -2.04
HMGB3P23-201ENST00000414981 C19orf84I3L1E1 186 aa2.29□□□□□ -2.04
HMGB3P23-201ENST00000414981 ZNF861PO60384 105 aa2.29□□□□□ -2.04
HMGB3P23-201ENST00000414981 XCL1P47992 114 aa2.29□□□□□ -2.04
HMGB3P23-201ENST00000414981 CCL18P55774 89 aa2.29□□□□□ -2.04
HMGB3P23-201ENST00000414981 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
HMGB3P23-201ENST00000414981 Q8IZM0 81 aa2.29□□□□□ -2.04
HMGB3P23-201ENST00000414981 MIR7-3HGQ8N6C7 128 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms