RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 DEFB136Q30KP8 78 aa6.72□□□□□ -1.33
SNHG3-201ENST00000413987 LCA10Q71F78 164 aa6.72□□□□□ -1.33
SNHG3-201ENST00000413987 IGHV3-66A0A0C4DH42 116 aa6.72□□□□□ -1.33
SNHG3-201ENST00000413987 EPM2AB3EWF7 344 aa6.72□□□□□ -1.33
SNHG3-201ENST00000413987 C16orf95Q9H693 158 aa6.72□□□□□ -1.33
SNHG3-201ENST00000413987 TRBV6-5A0A0K0K1A5 114 aa6.71□□□□□ -1.34
SNHG3-201ENST00000413987 CLPSL1A2RUU4 121 aa6.71□□□□□ -1.34
SNHG3-201ENST00000413987 RHOHQ15669 191 aa6.71□□□□□ -1.34
SNHG3-201ENST00000413987 PRR9Q5T870 116 aa6.71□□□□□ -1.34
SNHG3-201ENST00000413987 ZFAND2AQ8N6M9 145 aa6.71□□□□□ -1.34
SNHG3-201ENST00000413987 A0A0J9YXY3 114 aa6.7□□□□□ -1.34
SNHG3-201ENST00000413987 TRBV27A0A0K0K1C4 114 aa6.7□□□□□ -1.34
SNHG3-201ENST00000413987 KIF25-AS1Q9Y6Z4 181 aa6.7□□□□□ -1.34
SNHG3-201ENST00000413987 RPL39P62891 51 aaKnown RBP6.7□□□□□ -1.34
SNHG3-201ENST00000413987 LINC00643Q86TS7 51 aa6.7□□□□□ -1.34
SNHG3-201ENST00000413987 Q8N2B8 174 aa6.7□□□□□ -1.34
SNHG3-201ENST00000413987 TRAV12-2A0A075B6T6 113 aa6.69□□□□□ -1.34
SNHG3-201ENST00000413987 TRBV7-1A0A0A6YYK4 115 aa6.69□□□□□ -1.34
SNHG3-201ENST00000413987 FAM223BA6NKX1 122 aa6.69□□□□□ -1.34
SNHG3-201ENST00000413987 ZNF22P17026 224 aaPredicted RBP6.69□□□□□ -1.34
SNHG3-201ENST00000413987 LINC00315P59091 139 aa6.69□□□□□ -1.34
SNHG3-201ENST00000413987 FAM223AQ8IWN6 122 aa6.69□□□□□ -1.34
SNHG3-201ENST00000413987 LINC01006Q8NI28 216 aa6.69□□□□□ -1.34
SNHG3-201ENST00000413987 CRYGAP11844 174 aa6.69□□□□□ -1.34
SNHG3-201ENST00000413987 CXCL5P42830 114 aa6.69□□□□□ -1.34
SNHG3-201ENST00000413987 SUMO4Q6EEV6 95 aa6.69□□□□□ -1.34
SNHG3-201ENST00000413987 STAB1Q9NY15 2570 aa6.68□□□□□ -1.34
SNHG3-201ENST00000413987 CD28P10747 220 aa6.68□□□□□ -1.34
SNHG3-201ENST00000413987 RNASE3P12724 160 aaKnown RBP6.68□□□□□ -1.34
SNHG3-201ENST00000413987 PRSS2P07478 247 aa6.68□□□□□ -1.34
SNHG3-201ENST00000413987 TMEM61Q8N0U2 210 aa6.68□□□□□ -1.34
SNHG3-201ENST00000413987 NKAPP1Q8N9T2 125 aa6.68□□□□□ -1.34
SNHG3-201ENST00000413987 GNRH2O43555 120 aa6.67□□□□□ -1.34
SNHG3-201ENST00000413987 RNASE4P34096 147 aaKnown RBP6.67□□□□□ -1.34
SNHG3-201ENST00000413987 MIAQ16674 131 aa6.67□□□□□ -1.34
SNHG3-201ENST00000413987 IGLV5-37A0A075B6J1 123 aa6.66□□□□□ -1.34
SNHG3-201ENST00000413987 H3BUA1 57 aa6.66□□□□□ -1.34
SNHG3-201ENST00000413987 TMEM256-PLSCR3K7ERE1 68 aa6.66□□□□□ -1.34
SNHG3-201ENST00000413987 USMG5Q96IX5 58 aa6.66□□□□□ -1.34
SNHG3-201ENST00000413987 LITAFQ99732 161 aa6.66□□□□□ -1.34
SNHG3-201ENST00000413987 TIMM21Q9BVV7 248 aa6.66□□□□□ -1.34
SNHG3-201ENST00000413987 PKD1L1Q8TDX9 2849 aa6.66□□□□□ -1.34
SNHG3-201ENST00000413987 COL6A5A8TX70 2615 aa6.66□□□□□ -1.34
SNHG3-201ENST00000413987 I3L3M4 83 aa6.66□□□□□ -1.34
SNHG3-201ENST00000413987 IGHV3-30-3P0DP02 117 aa6.66□□□□□ -1.34
SNHG3-201ENST00000413987 KRTAP10-3P60369 221 aa6.66□□□□□ -1.34
SNHG3-201ENST00000413987 C3orf56Q8N813 242 aa6.66□□□□□ -1.34
SNHG3-201ENST00000413987 TIMM17BO60830 172 aa6.65□□□□□ -1.34
SNHG3-201ENST00000413987 COX7CP15954 63 aa6.65□□□□□ -1.34
SNHG3-201ENST00000413987 SLURP1P55000 103 aa6.65□□□□□ -1.34
SNHG3-201ENST00000413987 REG3GQ6UW15 175 aa6.65□□□□□ -1.34
SNHG3-201ENST00000413987 C20orf203Q8NBC4 194 aa6.65□□□□□ -1.34
SNHG3-201ENST00000413987 ZNF580Q9UK33 172 aa6.65□□□□□ -1.34
SNHG3-201ENST00000413987 IGKV3-7A0A075B6H7 116 aa6.65□□□□□ -1.35
SNHG3-201ENST00000413987 IGHV3-64A0A075B6Q5 118 aa6.65□□□□□ -1.35
SNHG3-201ENST00000413987 TRACP01848 142 aa6.65□□□□□ -1.35
SNHG3-201ENST00000413987 COPS9Q8WXC6 57 aa6.65□□□□□ -1.35
SNHG3-201ENST00000413987 CLEC2BQ92478 149 aa6.65□□□□□ -1.35
SNHG3-201ENST00000413987 LCE2DQ5TA82 110 aaPredicted RBP6.64□□□□□ -1.35
SNHG3-201ENST00000413987 SDIM1Q6ZPB5 146 aa6.64□□□□□ -1.35
SNHG3-201ENST00000413987 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.64□□□□□ -1.35
SNHG3-201ENST00000413987 NDUFA12Q9UI09 145 aa6.64□□□□□ -1.35
SNHG3-201ENST00000413987 IGLV4-3A0A075B6K6 122 aa6.64□□□□□ -1.35
SNHG3-201ENST00000413987 C5orf38Q86SI9 138 aa6.64□□□□□ -1.35
SNHG3-201ENST00000413987 NDUFC2-KCTD14E9PQ53 114 aa6.63□□□□□ -1.35
SNHG3-201ENST00000413987 ATOX1O00244 68 aa6.63□□□□□ -1.35
SNHG3-201ENST00000413987 SOCS3O14543 225 aa6.63□□□□□ -1.35
SNHG3-201ENST00000413987 PROK1P58294 105 aa6.63□□□□□ -1.35
SNHG3-201ENST00000413987 MRPS36P82909 103 aaKnown RBP6.63□□□□□ -1.35
SNHG3-201ENST00000413987 PHF5AQ7RTV0 110 aaKnown RBP6.63□□□□□ -1.35
SNHG3-201ENST00000413987 SNRPD3P62318 126 aaKnown RBP6.62□□□□□ -1.35
SNHG3-201ENST00000413987 CEMP1Q6PRD7 247 aaPredicted RBP6.62□□□□□ -1.35
SNHG3-201ENST00000413987 OPRPNQ99935 248 aaPredicted RBP6.62□□□□□ -1.35
SNHG3-201ENST00000413987 M0QY20 66 aa6.62□□□□□ -1.35
SNHG3-201ENST00000413987 NDUFA4O00483 81 aa6.62□□□□□ -1.35
SNHG3-201ENST00000413987 ADAMTSL4-AS1Q5T5F5 129 aa6.62□□□□□ -1.35
SNHG3-201ENST00000413987 DAND5Q8N907 189 aa6.62□□□□□ -1.35
SNHG3-201ENST00000413987 NOTCH3Q9UM47 2321 aa6.62□□□□□ -1.35
SNHG3-201ENST00000413987 CIRBPQ14011 172 aaKnown RBP6.61□□□□□ -1.35
SNHG3-201ENST00000413987 SERP1Q9Y6X1 66 aa6.61□□□□□ -1.35
SNHG3-201ENST00000413987 DEFB1P60022 68 aa6.61□□□□□ -1.35
SNHG3-201ENST00000413987 DEFB104AQ8WTQ1 72 aa6.61□□□□□ -1.35
SNHG3-201ENST00000413987 C4orf3Q8WVX3 66 aa6.61□□□□□ -1.35
SNHG3-201ENST00000413987 VSIG2Q96IQ7 327 aa6.61□□□□□ -1.35
SNHG3-201ENST00000413987 SORL1Q92673 2214 aa6.61□□□□□ -1.35
SNHG3-201ENST00000413987 SMCR5Q8TEV8 140 aa6.6□□□□□ -1.35
SNHG3-201ENST00000413987 RHPN1-AS1Q9BWJ2 59 aa6.6□□□□□ -1.35
SNHG3-201ENST00000413987 HIST1H4AP62805 103 aaKnown RBP6.6□□□□□ -1.35
SNHG3-201ENST00000413987 FAM74A4Q5TZK3 123 aa6.6□□□□□ -1.35
SNHG3-201ENST00000413987 UBE2BP63146 152 aa6.59□□□□□ -1.35
SNHG3-201ENST00000413987 KRTAP24-1Q3LI83 254 aa6.59□□□□□ -1.35
SNHG3-201ENST00000413987 PRAC1Q96KF2 57 aa6.59□□□□□ -1.35
SNHG3-201ENST00000413987 BAALC-AS2P0C853 105 aa6.58□□□□□ -1.36
SNHG3-201ENST00000413987 LINC00476Q8WZB0 136 aa6.58□□□□□ -1.36
SNHG3-201ENST00000413987 IGHV3-16A0A0C4DH30 117 aa6.57□□□□□ -1.36
SNHG3-201ENST00000413987 CMYA5Q8N3K9 4069 aa6.57□□□□□ -1.36
SNHG3-201ENST00000413987 ANK2Q01484 3957 aa6.57□□□□□ -1.36
SNHG3-201ENST00000413987 NDUFA1O15239 70 aa6.57□□□□□ -1.36
SNHG3-201ENST00000413987 CHTF8P0CG12 524 aa6.57□□□□□ -1.36
SNHG3-201ENST00000413987 NPC2P61916 151 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 329.4 ms