RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 C3orf84H3BNL1 204 aa10.14□□□□□ -0.79
GABPA-202ENST00000400075 C16orf90A8MZG2 172 aa10.13□□□□□ -0.79
GABPA-202ENST00000400075 C5orf42Q9H799 3197 aa10.13□□□□□ -0.79
GABPA-202ENST00000400075 Q6ZSN1 163 aa10.13□□□□□ -0.79
GABPA-202ENST00000400075 COX8CQ7Z4L0 72 aa10.13□□□□□ -0.79
GABPA-202ENST00000400075 C11orf72Q8NBR9 251 aa10.12□□□□□ -0.79
GABPA-202ENST00000400075 CSDC2Q9Y534 153 aaKnown RBP10.12□□□□□ -0.79
GABPA-202ENST00000400075 FAM229AH3BQW9 127 aa10.12□□□□□ -0.79
GABPA-202ENST00000400075 MP68P56378 58 aa10.12□□□□□ -0.79
GABPA-202ENST00000400075 DSPP15924 2871 aaKnown RBP10.12□□□□□ -0.79
GABPA-202ENST00000400075 TRANK1O15050 2925 aa10.12□□□□□ -0.79
GABPA-202ENST00000400075 H3BNG1 76 aa10.12□□□□□ -0.79
GABPA-202ENST00000400075 TCL1BO95988 128 aa10.12□□□□□ -0.79
GABPA-202ENST00000400075 KRTAP1-3Q8IUG1 177 aa10.12□□□□□ -0.79
GABPA-202ENST00000400075 COL27A1Q8IZC6 1860 aaPredicted RBP10.11□□□□□ -0.79
GABPA-202ENST00000400075 C2orf48Q96LS8 159 aa10.11□□□□□ -0.79
GABPA-202ENST00000400075 HRCT1Q6UXD1 115 aa10.11□□□□□ -0.79
GABPA-202ENST00000400075 NBDYA0A0U1RRE5 68 aa10.11□□□□□ -0.79
GABPA-202ENST00000400075 C9orf116Q5BN46 136 aaPredicted RBP10.11□□□□□ -0.79
GABPA-202ENST00000400075 F8WDY8 70 aa10.1□□□□□ -0.79
GABPA-202ENST00000400075 ZNF73O43830 326 aaPredicted RBP10.1□□□□□ -0.79
GABPA-202ENST00000400075 ACYP1P07311 99 aa10.1□□□□□ -0.79
GABPA-202ENST00000400075 A0A0B4J2C4 111 aa10.1□□□□□ -0.79
GABPA-202ENST00000400075 TIMM17BO60830 172 aa10.1□□□□□ -0.79
GABPA-202ENST00000400075 Q6ZQY7 126 aa10.1□□□□□ -0.79
GABPA-202ENST00000400075 NDUFC2-KCTD14E9PQ53 114 aa10.09□□□□□ -0.79
GABPA-202ENST00000400075 IGIPA6NJ69 53 aa10.09□□□□□ -0.79
GABPA-202ENST00000400075 H3BT86 120 aa10.09□□□□□ -0.79
GABPA-202ENST00000400075 Q8NAQ8 132 aa10.09□□□□□ -0.79
GABPA-202ENST00000400075 BPY2O14599 106 aa10.09□□□□□ -0.79
GABPA-202ENST00000400075 MGAQ8IWI9 3026 aa10.08□□□□□ -0.8
GABPA-202ENST00000400075 NOTCH1P46531 2555 aa10.08□□□□□ -0.8
GABPA-202ENST00000400075 GCN1Q92616 2671 aaKnown RBP10.08□□□□□ -0.8
GABPA-202ENST00000400075 LINC00315P59091 139 aa10.08□□□□□ -0.8
GABPA-202ENST00000400075 SMIM1B2RUZ4 78 aa10.07□□□□□ -0.8
GABPA-202ENST00000400075 AKAP13Q12802 2813 aa10.06□□□□□ -0.8
GABPA-202ENST00000400075 IGSF10Q6WRI0 2623 aa10.06□□□□□ -0.8
GABPA-202ENST00000400075 SLPIP03973 132 aa10.06□□□□□ -0.8
GABPA-202ENST00000400075 KRTAP1-1Q07627 177 aa10.06□□□□□ -0.8
GABPA-202ENST00000400075 MKI67P46013 3256 aaKnown RBP10.06□□□□□ -0.8
GABPA-202ENST00000400075 REG3GQ6UW15 175 aa10.06□□□□□ -0.8
GABPA-202ENST00000400075 IGKV4-1P06312 121 aa10.05□□□□□ -0.8
GABPA-202ENST00000400075 CIRBP-AS1Q8TBR5 109 aa10.05□□□□□ -0.8
GABPA-202ENST00000400075 CHKB-CPT1BH3BT56 60 aa10.05□□□□□ -0.8
GABPA-202ENST00000400075 CCKP06307 115 aa10.05□□□□□ -0.8
GABPA-202ENST00000400075 KRTAP10-11P60412 298 aa10.05□□□□□ -0.8
GABPA-202ENST00000400075 C14orf132Q9NPU4 83 aa10.04□□□□□ -0.8
GABPA-202ENST00000400075 IGKV3D-7A0A0C4DH55 119 aa10.04□□□□□ -0.8
GABPA-202ENST00000400075 MAPKAPK5-AS1Q8N8E1 139 aa10.03□□□□□ -0.8
GABPA-202ENST00000400075 UPK3BQ9BT76 320 aa10.03□□□□□ -0.8
GABPA-202ENST00000400075 Q6ZRU5 148 aa10.03□□□□□ -0.8
GABPA-202ENST00000400075 CDPF1Q6NVV7 123 aa10.03□□□□□ -0.8
GABPA-202ENST00000400075 MRPL55Q7Z7F7 128 aaKnown RBP10.02□□□□□ -0.8
GABPA-202ENST00000400075 TEN1Q86WV5 123 aa10.02□□□□□ -0.81
GABPA-202ENST00000400075 LINC00588Q9Y4M8 146 aa10.02□□□□□ -0.81
GABPA-202ENST00000400075 NBEAL1Q6ZS30 2694 aa10.01□□□□□ -0.81
GABPA-202ENST00000400075 TRBV10-3A0A0K0K1G6 114 aa10.01□□□□□ -0.81
GABPA-202ENST00000400075 PRUNE2Q8WUY3 3088 aa10.01□□□□□ -0.81
GABPA-202ENST00000400075 C10orf25Q5T742 122 aa10.01□□□□□ -0.81
GABPA-202ENST00000400075 PCP4P48539 62 aa10□□□□□ -0.81
GABPA-202ENST00000400075 KRTAP10-3P60369 221 aa10□□□□□ -0.81
GABPA-202ENST00000400075 AMELXQ99217 191 aa9.98□□□□□ -0.81
GABPA-202ENST00000400075 C19orf73Q9NVV2 129 aa9.98□□□□□ -0.81
GABPA-202ENST00000400075 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.98□□□□□ -0.81
GABPA-202ENST00000400075 SMIM11BQ8TCY0 68 aa9.98□□□□□ -0.81
GABPA-202ENST00000400075 KIF25-AS1Q9Y6Z4 181 aa9.97□□□□□ -0.81
GABPA-202ENST00000400075 RTL8CO15255 209 aa9.97□□□□□ -0.81
GABPA-202ENST00000400075 LINC01561Q8N1V8 128 aa9.97□□□□□ -0.81
GABPA-202ENST00000400075 XGP55808 180 aa9.96□□□□□ -0.81
GABPA-202ENST00000400075 KLK9Q2XQG4 91 aa9.96□□□□□ -0.82
GABPA-202ENST00000400075 FAM19A4Q96LR4 140 aa9.96□□□□□ -0.82
GABPA-202ENST00000400075 CASC2Q6XLA1 102 aa9.95□□□□□ -0.82
GABPA-202ENST00000400075 TRIAP1O43715 76 aa9.95□□□□□ -0.82
GABPA-202ENST00000400075 TP73-AS1Q9UF72 201 aa9.95□□□□□ -0.82
GABPA-202ENST00000400075 WFDC2Q14508 124 aa9.95□□□□□ -0.82
GABPA-202ENST00000400075 J3QL48 77 aa9.94□□□□□ -0.82
GABPA-202ENST00000400075 WDFY4Q6ZS81 3184 aa9.94□□□□□ -0.82
GABPA-202ENST00000400075 NTM-AS1Q6ZSK4 140 aa9.94□□□□□ -0.82
GABPA-202ENST00000400075 LST1O00453 97 aa9.94□□□□□ -0.82
GABPA-202ENST00000400075 PRR3P79522 188 aaKnown RBP9.94□□□□□ -0.82
GABPA-202ENST00000400075 TRIOO75962 3097 aa9.93□□□□□ -0.82
GABPA-202ENST00000400075 C22orf24Q9Y442 160 aa9.93□□□□□ -0.82
GABPA-202ENST00000400075 BRCA2P51587 3418 aa9.92□□□□□ -0.82
GABPA-202ENST00000400075 MAP1AP78559 2803 aaPredicted RBP9.92□□□□□ -0.82
GABPA-202ENST00000400075 PRYO14603 147 aa9.92□□□□□ -0.82
GABPA-202ENST00000400075 TEX49A0A1B0GTD5 131 aa9.91□□□□□ -0.82
GABPA-202ENST00000400075 TM2D3Q9BRN9 247 aa9.91□□□□□ -0.82
GABPA-202ENST00000400075 PLA2G1BP04054 148 aaKnown RBP9.9□□□□□ -0.82
GABPA-202ENST00000400075 NDUFV3P56181 108 aaKnown RBP9.9□□□□□ -0.82
GABPA-202ENST00000400075 PRLHP81277 87 aa9.9□□□□□ -0.82
GABPA-202ENST00000400075 LINC00337Q8N6G1 96 aa9.9□□□□□ -0.82
GABPA-202ENST00000400075 TAX1BP3O14907 124 aa9.9□□□□□ -0.82
GABPA-202ENST00000400075 SCXQ7RTU7 201 aa9.9□□□□□ -0.82
GABPA-202ENST00000400075 IGHV3OR16-9A0A0B4J2B5 98 aa9.89□□□□□ -0.83
GABPA-202ENST00000400075 Q9BRP9 147 aa9.88□□□□□ -0.83
GABPA-202ENST00000400075 Q6JHZ5 121 aa9.88□□□□□ -0.83
GABPA-202ENST00000400075 DNAH10OSP0CZ25 163 aa9.87□□□□□ -0.83
GABPA-202ENST00000400075 NDUFC2O95298 119 aa9.86□□□□□ -0.83
GABPA-202ENST00000400075 Q6ZRP5 223 aa9.86□□□□□ -0.83
GABPA-202ENST00000400075 YPEL4Q96NS1 127 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms