RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 XCL1P47992 114 aa12.2□□□□□ -0.46
HLA-DQB1-204ENST00000399084 COX17Q14061 63 aa12.2□□□□□ -0.46
HLA-DQB1-204ENST00000399084 MUC7Q8TAX7 377 aa12.2□□□□□ -0.46
HLA-DQB1-204ENST00000399084 DNHD1Q96M86 4753 aa12.19□□□□□ -0.46
HLA-DQB1-204ENST00000399084 REG3AQ06141 175 aa12.19□□□□□ -0.46
HLA-DQB1-204ENST00000399084 LINC00269Q8N2A0 174 aa12.19□□□□□ -0.46
HLA-DQB1-204ENST00000399084 CARD19Q96LW7 228 aa12.19□□□□□ -0.46
HLA-DQB1-204ENST00000399084 SND1-IT1Q9HBX3 110 aa12.19□□□□□ -0.46
HLA-DQB1-204ENST00000399084 FBN3Q75N90 2809 aa12.19□□□□□ -0.46
HLA-DQB1-204ENST00000399084 A0A096LPF7 62 aa12.18□□□□□ -0.46
HLA-DQB1-204ENST00000399084 CRPP02741 224 aa12.18□□□□□ -0.46
HLA-DQB1-204ENST00000399084 RPL28P46779 137 aaKnown RBP12.18□□□□□ -0.46
HLA-DQB1-204ENST00000399084 ANGP03950 147 aaKnown RBP12.17□□□□□ -0.46
HLA-DQB1-204ENST00000399084 SCGB1A1P11684 91 aa12.17□□□□□ -0.46
HLA-DQB1-204ENST00000399084 C3orf56Q8N813 242 aa12.17□□□□□ -0.46
HLA-DQB1-204ENST00000399084 TRACP01848 142 aa12.17□□□□□ -0.46
HLA-DQB1-204ENST00000399084 CHCHD10Q8WYQ3 142 aaPredicted RBP12.17□□□□□ -0.46
HLA-DQB1-204ENST00000399084 C11orf68Q9H3H3 251 aaKnown RBP12.17□□□□□ -0.46
HLA-DQB1-204ENST00000399084 CKS1BP61024 79 aa12.16□□□□□ -0.46
HLA-DQB1-204ENST00000399084 C2orf82Q6UX34 121 aa12.16□□□□□ -0.46
HLA-DQB1-204ENST00000399084 KRTAP24-1Q3LI83 254 aa12.15□□□□□ -0.46
HLA-DQB1-204ENST00000399084 CCL18P55774 89 aa12.14□□□□□ -0.47
HLA-DQB1-204ENST00000399084 CFAP161Q6P656 301 aa12.14□□□□□ -0.47
HLA-DQB1-204ENST00000399084 PRR34Q9NV39 138 aa12.14□□□□□ -0.47
HLA-DQB1-204ENST00000399084 KLK5Q9Y337 293 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQB1-204ENST00000399084 VWFP04275 2813 aa12.14□□□□□ -0.47
HLA-DQB1-204ENST00000399084 MALP21145 153 aa12.14□□□□□ -0.47
HLA-DQB1-204ENST00000399084 OXLD1Q5BKU9 147 aa12.14□□□□□ -0.47
HLA-DQB1-204ENST00000399084 CLEC2BQ92478 149 aa12.13□□□□□ -0.47
HLA-DQB1-204ENST00000399084 ATRQ13535 2644 aa12.12□□□□□ -0.47
HLA-DQB1-204ENST00000399084 TRAV8-4A0A0B4J246 113 aa12.12□□□□□ -0.47
HLA-DQB1-204ENST00000399084 H0YGX0 51 aa12.12□□□□□ -0.47
HLA-DQB1-204ENST00000399084 HTN3P15516 51 aa12.12□□□□□ -0.47
HLA-DQB1-204ENST00000399084 KRTAP10-11P60412 298 aa12.12□□□□□ -0.47
HLA-DQB1-204ENST00000399084 KIAA0087Q14695 138 aa12.12□□□□□ -0.47
HLA-DQB1-204ENST00000399084 LYPD5Q6UWN5 251 aa12.11□□□□□ -0.47
HLA-DQB1-204ENST00000399084 NTN5Q8WTR8 489 aaPredicted RBP12.11□□□□□ -0.47
HLA-DQB1-204ENST00000399084 NDUFC2O95298 119 aa12.11□□□□□ -0.47
HLA-DQB1-204ENST00000399084 PFN2P35080 140 aa12.11□□□□□ -0.47
HLA-DQB1-204ENST00000399084 UBE2WQ96B02 151 aa12.11□□□□□ -0.47
HLA-DQB1-204ENST00000399084 TENM1Q9UKZ4 2725 aa12.1□□□□□ -0.47
HLA-DQB1-204ENST00000399084 IGKV2-28A0A075B6P5 120 aa12.1□□□□□ -0.47
HLA-DQB1-204ENST00000399084 IGKV2D-28P01615 120 aa12.1□□□□□ -0.47
HLA-DQB1-204ENST00000399084 DEFB121Q5J5C9 76 aa12.1□□□□□ -0.47
HLA-DQB1-204ENST00000399084 CLPSL2Q6UWE3 100 aa12.09□□□□□ -0.47
HLA-DQB1-204ENST00000399084 LINC00337Q8N6G1 96 aa12.09□□□□□ -0.47
HLA-DQB1-204ENST00000399084 CDIP1Q9H305 208 aa12.08□□□□□ -0.48
HLA-DQB1-204ENST00000399084 NBEAL2Q6ZNJ1 2754 aa12.05□□□□□ -0.48
HLA-DQB1-204ENST00000399084 A0A0J9YWU9 116 aa12.05□□□□□ -0.48
HLA-DQB1-204ENST00000399084 FAM240AA0A1B0GVK7 77 aa12.05□□□□□ -0.48
HLA-DQB1-204ENST00000399084 KPRPQ5T749 579 aaPredicted RBP12.05□□□□□ -0.48
HLA-DQB1-204ENST00000399084 IGLV10-54A0A075B6I4 117 aa12.03□□□□□ -0.48
HLA-DQB1-204ENST00000399084 TEX49A0A1B0GTD5 131 aa12.03□□□□□ -0.48
HLA-DQB1-204ENST00000399084 SMIM11BQ8TCY0 68 aa12.03□□□□□ -0.48
HLA-DQB1-204ENST00000399084 KLK12Q9UKR0 248 aa12.03□□□□□ -0.48
HLA-DQB1-204ENST00000399084 GVQW2A0A096LPI5 108 aaPredicted RBP12.03□□□□□ -0.48
HLA-DQB1-204ENST00000399084 ENHOQ6UWT2 76 aa12.02□□□□□ -0.49
HLA-DQB1-204ENST00000399084 A0A1B0GX51 115 aa12.01□□□□□ -0.49
HLA-DQB1-204ENST00000399084 ACYP1P07311 99 aa12.01□□□□□ -0.49
HLA-DQB1-204ENST00000399084 TMEM126AQ9H061 195 aa12.01□□□□□ -0.49
HLA-DQB1-204ENST00000399084 BAALC-AS2P0C853 105 aa12□□□□□ -0.49
HLA-DQB1-204ENST00000399084 SPAG11BQ08648 103 aa12□□□□□ -0.49
HLA-DQB1-204ENST00000399084 Q8N3U1 123 aa12□□□□□ -0.49
HLA-DQB1-204ENST00000399084 OR13C6PQ8NH95 151 aa12□□□□□ -0.49
HLA-DQB1-204ENST00000399084 DNAL4O96015 105 aa11.99□□□□□ -0.49
HLA-DQB1-204ENST00000399084 Q6ZTC4 211 aa11.99□□□□□ -0.49
HLA-DQB1-204ENST00000399084 F8WDY8 70 aa11.98□□□□□ -0.49
HLA-DQB1-204ENST00000399084 C11orf45Q8TAV5 145 aa11.98□□□□□ -0.49
HLA-DQB1-204ENST00000399084 RETNQ9HD89 108 aa11.97□□□□□ -0.49
HLA-DQB1-204ENST00000399084 INAFM2P0DMQ5 153 aa11.97□□□□□ -0.49
HLA-DQB1-204ENST00000399084 SNCGO76070 127 aa11.96□□□□□ -0.49
HLA-DQB1-204ENST00000399084 C21orf62-AS1Q17RA5 79 aa11.96□□□□□ -0.49
HLA-DQB1-204ENST00000399084 FAM218AQ96MZ4 157 aa11.96□□□□□ -0.49
HLA-DQB1-204ENST00000399084 DEFB131BA0A096LNP1 70 aa11.95□□□□□ -0.5
HLA-DQB1-204ENST00000399084 XGP55808 180 aa11.94□□□□□ -0.5
HLA-DQB1-204ENST00000399084 LINC01556Q5JQF7 62 aa11.94□□□□□ -0.5
HLA-DQB1-204ENST00000399084 UNQ6190/PRO20217Q6UXQ8 127 aa11.93□□□□□ -0.5
HLA-DQB1-204ENST00000399084 C15orf53Q8NAA6 179 aa11.93□□□□□ -0.5
HLA-DQB1-204ENST00000399084 ESRGQ1W209 222 aa11.92□□□□□ -0.5
HLA-DQB1-204ENST00000399084 WFDC10BQ8IUB3 73 aa11.92□□□□□ -0.5
HLA-DQB1-204ENST00000399084 C2orf48Q96LS8 159 aa11.91□□□□□ -0.5
HLA-DQB1-204ENST00000399084 MDFIQ99750 246 aa11.91□□□□□ -0.5
HLA-DQB1-204ENST00000399084 TRAV10A0A0B4J240 114 aa11.9□□□□□ -0.5
HLA-DQB1-204ENST00000399084 ZNF561-AS1K7EIQ3 104 aa11.9□□□□□ -0.5
HLA-DQB1-204ENST00000399084 MT-ATP8P03928 68 aa11.9□□□□□ -0.5
HLA-DQB1-204ENST00000399084 NANOS2P60321 138 aaKnown RBP11.89□□□□□ -0.51
HLA-DQB1-204ENST00000399084 KRTAP26-1Q6PEX3 210 aa11.89□□□□□ -0.51
HLA-DQB1-204ENST00000399084 Q6Q795 121 aa11.89□□□□□ -0.51
HLA-DQB1-204ENST00000399084 LINC00167Q96N53 147 aa11.89□□□□□ -0.51
HLA-DQB1-204ENST00000399084 A0A087WYN8 130 aa11.89□□□□□ -0.51
HLA-DQB1-204ENST00000399084 C9orf116Q5BN46 136 aaPredicted RBP11.89□□□□□ -0.51
HLA-DQB1-204ENST00000399084 C10orf25Q5T742 122 aa11.89□□□□□ -0.51
HLA-DQB1-204ENST00000399084 TM2D3Q9BRN9 247 aa11.89□□□□□ -0.51
HLA-DQB1-204ENST00000399084 S100A7L2Q5SY68 101 aa11.88□□□□□ -0.51
HLA-DQB1-204ENST00000399084 C6orf223Q8N319 242 aa11.88□□□□□ -0.51
HLA-DQB1-204ENST00000399084 LECT2O14960 151 aa11.87□□□□□ -0.51
HLA-DQB1-204ENST00000399084 DNAH10OSP0CZ25 163 aa11.87□□□□□ -0.51
HLA-DQB1-204ENST00000399084 C1orf43Q9BWL3 253 aa11.87□□□□□ -0.51
HLA-DQB1-204ENST00000399084 ORMDL1Q9P0S3 153 aa11.87□□□□□ -0.51
HLA-DQB1-204ENST00000399084 OBSCN-AS1Q96MR7 158 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms