RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 CENPFP49454 3210 aa0.33□□□□□ -2.36
CD47-203ENST00000398258 OTOGQ6ZRI0 2925 aa0.33□□□□□ -2.36
CD47-203ENST00000398258 HELZP42694 1942 aaKnown RBP0.33□□□□□ -2.36
CD47-203ENST00000398258 FLNAP21333 2647 aaKnown RBP0.33□□□□□ -2.36
CD47-203ENST00000398258 ATRQ13535 2644 aa0.33□□□□□ -2.36
CD47-203ENST00000398258 KRTAP2-3P0C7H8 128 aa0.33□□□□□ -2.36
CD47-203ENST00000398258 CBLN1P23435 193 aa0.33□□□□□ -2.36
CD47-203ENST00000398258 RBM3P98179 157 aaKnown RBP0.33□□□□□ -2.36
CD47-203ENST00000398258 TFF3Q07654 80 aa0.33□□□□□ -2.36
CD47-203ENST00000398258 KRTAP20-1Q3LI63 56 aa0.33□□□□□ -2.36
CD47-203ENST00000398258 COX6B2Q6YFQ2 88 aa0.33□□□□□ -2.36
CD47-203ENST00000398258 KRTAP2-4Q9BYR9 128 aa0.33□□□□□ -2.36
CD47-203ENST00000398258 KRTAP2-1Q9BYU5 128 aa0.33□□□□□ -2.36
CD47-203ENST00000398258 MEGF8Q7Z7M0 2845 aa0.33□□□□□ -2.36
CD47-203ENST00000398258 NSD1Q96L73 2696 aaPredicted RBP0.33□□□□□ -2.36
CD47-203ENST00000398258 DOCK1Q14185 1865 aa0.33□□□□□ -2.36
CD47-203ENST00000398258 SPG11Q96JI7 2443 aa0.33□□□□□ -2.36
CD47-203ENST00000398258 IGF2RP11717 2491 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 FLNCQ14315 2725 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 SYNE2Q8WXH0 6885 aaKnown RBP0.32□□□□□ -2.36
CD47-203ENST00000398258 CFAP47Q6ZTR5 3102 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 NBASA2RRP1 2371 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 CACNA1HO95180 2353 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 F8P00451 2351 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 PDZD2O15018 2839 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 UBR4Q5T4S7 5183 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 GVQW2A0A096LPI5 108 aaPredicted RBP0.32□□□□□ -2.36
CD47-203ENST00000398258 TRGV1A0A0A0MS02 117 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 SMR3BP02814 79 aaPredicted RBP0.32□□□□□ -2.36
CD47-203ENST00000398258 ACYP2P14621 99 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 EDDM3BP56851 147 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 MEIG1Q5JSS6 88 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 NCMAPQ5T1S8 102 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 WFDC9Q8NEX5 89 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 LCN9Q8WX39 176 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 LSM10Q969L4 123 aaKnown RBP0.32□□□□□ -2.36
CD47-203ENST00000398258 Q96NJ1 140 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 PRR15LQ9BU68 103 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 AGPAT4-IT1Q9H0P7 198 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 ESPL1Q14674 2120 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 LOC400499M0QZD8 3231 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 RGPD2P0DJD1 1756 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 EP300Q09472 2414 aaPredicted RBP0.32□□□□□ -2.36
CD47-203ENST00000398258 MED13LQ71F56 2210 aa0.32□□□□□ -2.36
CD47-203ENST00000398258 FOCADQ5VW36 1801 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 AHCTF1Q8WYP5 2266 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 CELSR2Q9HCU4 2923 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 MGAM2Q2M2H8 2515 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 TLN2Q9Y4G6 2542 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 PTPRQQ9UMZ3 2332 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 PCLOQ9Y6V0 5065 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 FAM92AA1XBS5 289 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 DEFB108AA8MXU0 73 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 H3BSH0 61 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 NDUFA4O00483 81 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 SPART-AS1P0CW21 52 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 LELP1Q5T871 98 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 VMO1Q7Z5L0 202 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 TSLPQ969D9 159 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 LINC00474Q9P2X8 69 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 LINC00312Q9Y6C7 94 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 U3KQA8 63 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 WDFY4Q6ZS81 3184 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 RIF1Q5UIP0 2472 aaKnown RBP0.31□□□□□ -2.36
CD47-203ENST00000398258 ANKRD36CQ5JPF3 1778 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 SPEGQ15772 3267 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 KMT2DO14686 5537 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 VWFP04275 2813 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 DNAH12Q6ZR08 3092 aa0.31□□□□□ -2.36
CD47-203ENST00000398258 KALRNO60229 2985 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 MUC3AQ02505 3323 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 PRUNE2Q8WUY3 3088 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 CSPG4Q6UVK1 2322 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 BRCA2P51587 3418 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 PLXNB2O15031 1838 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 FXYD6-FXYD2A0A087WZ82 144 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 DEFB131BA0A096LNP1 70 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 LOC100130705A0A1B0GUX0 176 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 MCRIP1C9JLW8 97 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 H3BUX3 64 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 MRPL33O75394 65 aaKnown RBP0.3□□□□□ -2.36
CD47-203ENST00000398258 HMGA1P17096 107 aaKnown RBP0.3□□□□□ -2.36
CD47-203ENST00000398258 DEFB112Q30KQ8 113 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 ZNF818PQ6ZRF7 136 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 Q6ZRX8 168 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.3□□□□□ -2.36
CD47-203ENST00000398258 SMIM11BQ8TCY0 68 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 COPS9Q8WXC6 57 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 UBE2D4Q9Y2X8 147 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 HIVEP3Q5T1R4 2406 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 HIVEP1P15822 2718 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 LAMA3Q16787 3333 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 NBEAL2Q6ZNJ1 2754 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 TENM2Q9NT68 2774 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 MYH1P12882 1939 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 F5P12259 2224 aa0.3□□□□□ -2.36
CD47-203ENST00000398258 DSTQ03001 7570 aaKnown RBP0.3□□□□□ -2.36
CD47-203ENST00000398258 NIPBLQ6KC79 2804 aaeCLIP0.3□□□□□ -2.36
CD47-203ENST00000398258 USP34Q70CQ2 3546 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms