RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 NOTCH1P46531 2555 aa6.37□□□□□ -1.39
RTN4-206ENST00000394611 MRPS36P82909 103 aaKnown RBP6.36□□□□□ -1.39
RTN4-206ENST00000394611 EBI3Q14213 229 aa6.36□□□□□ -1.39
RTN4-206ENST00000394611 LINC00269Q8N2A0 174 aa6.36□□□□□ -1.39
RTN4-206ENST00000394611 UPK3BQ9BT76 320 aa6.36□□□□□ -1.39
RTN4-206ENST00000394611 XAGE1AQ9HD64 81 aa6.36□□□□□ -1.39
RTN4-206ENST00000394611 F5H768 121 aa6.36□□□□□ -1.39
RTN4-206ENST00000394611 C5orf47Q569G3 176 aa6.36□□□□□ -1.39
RTN4-206ENST00000394611 C9orf85Q96MD7 179 aa6.36□□□□□ -1.39
RTN4-206ENST00000394611 MGAM2Q2M2H8 2515 aa6.35□□□□□ -1.39
RTN4-206ENST00000394611 K7EQD1 137 aa6.35□□□□□ -1.39
RTN4-206ENST00000394611 MED14OSP0DP75 135 aa6.35□□□□□ -1.39
RTN4-206ENST00000394611 RPL18AQ02543 176 aaKnown RBP6.35□□□□□ -1.39
RTN4-206ENST00000394611 C9orf129Q5T035 196 aaKnown RBP6.35□□□□□ -1.39
RTN4-206ENST00000394611 LINC00337Q8N6G1 96 aa6.35□□□□□ -1.39
RTN4-206ENST00000394611 OTOGQ6ZRI0 2925 aa6.35□□□□□ -1.39
RTN4-206ENST00000394611 NDUFA1O15239 70 aa6.35□□□□□ -1.39
RTN4-206ENST00000394611 DSCR9P59020 149 aa6.35□□□□□ -1.39
RTN4-206ENST00000394611 CHCHD7Q9BUK0 85 aa6.35□□□□□ -1.39
RTN4-206ENST00000394611 SMIM1B2RUZ4 78 aa6.34□□□□□ -1.39
RTN4-206ENST00000394611 PF4P02776 101 aa6.34□□□□□ -1.39
RTN4-206ENST00000394611 DNAJC30Q96LL9 226 aa6.34□□□□□ -1.39
RTN4-206ENST00000394611 TRBV6-5A0A0K0K1A5 114 aa6.34□□□□□ -1.39
RTN4-206ENST00000394611 GYPEP15421 78 aa6.34□□□□□ -1.39
RTN4-206ENST00000394611 C6orf99Q4VX62 202 aa6.34□□□□□ -1.39
RTN4-206ENST00000394611 MAP6D1Q9H9H5 199 aa6.34□□□□□ -1.39
RTN4-206ENST00000394611 CR1P17927 2039 aa6.34□□□□□ -1.39
RTN4-206ENST00000394611 CCL18P55774 89 aa6.34□□□□□ -1.4
RTN4-206ENST00000394611 A0A096LNT2 108 aa6.33□□□□□ -1.4
RTN4-206ENST00000394611 SS18Q15532 418 aa6.33□□□□□ -1.4
RTN4-206ENST00000394611 SPANXDQ9BXN6 97 aa6.33□□□□□ -1.4
RTN4-206ENST00000394611 SPANXCQ9NY87 97 aa6.33□□□□□ -1.4
RTN4-206ENST00000394611 LINC01546A6NGU7 62 aa6.33□□□□□ -1.4
RTN4-206ENST00000394611 IGLV4-60A0A075B6I1 120 aa6.33□□□□□ -1.4
RTN4-206ENST00000394611 A6NDX4 124 aa6.32□□□□□ -1.4
RTN4-206ENST00000394611 ZFHX3Q15911 3703 aa6.32□□□□□ -1.4
RTN4-206ENST00000394611 TEP1Q99973 2627 aaKnown RBP6.32□□□□□ -1.4
RTN4-206ENST00000394611 Q6Q795 121 aa6.32□□□□□ -1.4
RTN4-206ENST00000394611 SBSPONQ8IVN8 264 aa6.32□□□□□ -1.4
RTN4-206ENST00000394611 SERP2Q8N6R1 65 aa6.32□□□□□ -1.4
RTN4-206ENST00000394611 Q8N9L7 120 aa6.32□□□□□ -1.4
RTN4-206ENST00000394611 LITAFQ99732 161 aa6.31□□□□□ -1.4
RTN4-206ENST00000394611 MAST4O15021 2626 aa6.31□□□□□ -1.4
RTN4-206ENST00000394611 CYSTM1Q9H1C7 97 aa6.31□□□□□ -1.4
RTN4-206ENST00000394611 COL6A5A8TX70 2615 aa6.31□□□□□ -1.4
RTN4-206ENST00000394611 C3orf84H3BNL1 204 aa6.3□□□□□ -1.4
RTN4-206ENST00000394611 FAM236DA0A1B0GTK5 79 aa6.3□□□□□ -1.4
RTN4-206ENST00000394611 IGHV4-31P0DP07 118 aa6.3□□□□□ -1.4
RTN4-206ENST00000394611 FAM236CP0DP71 79 aa6.3□□□□□ -1.4
RTN4-206ENST00000394611 NANOS2P60321 138 aaKnown RBP6.3□□□□□ -1.4
RTN4-206ENST00000394611 SMR3AQ99954 134 aa6.3□□□□□ -1.4
RTN4-206ENST00000394611 HIVEP1P15822 2718 aa6.3□□□□□ -1.4
RTN4-206ENST00000394611 RMI2Q96E14 147 aa6.29□□□□□ -1.4
RTN4-206ENST00000394611 HIGD2BQ4VC39 106 aa6.29□□□□□ -1.4
RTN4-206ENST00000394611 Q6ZQY7 126 aa6.28□□□□□ -1.4
RTN4-206ENST00000394611 LINC01356Q8N9X3 169 aa6.28□□□□□ -1.4
RTN4-206ENST00000394611 CELA1Q9UNI1 258 aa6.28□□□□□ -1.4
RTN4-206ENST00000394611 PYGO1Q9Y3Y4 419 aa6.28□□□□□ -1.4
RTN4-206ENST00000394611 F8WEM9 126 aa6.28□□□□□ -1.4
RTN4-206ENST00000394611 H0YGX0 51 aa6.28□□□□□ -1.4
RTN4-206ENST00000394611 K7EMT4 169 aa6.28□□□□□ -1.4
RTN4-206ENST00000394611 OVOL2Q9BRP0 275 aa6.28□□□□□ -1.4
RTN4-206ENST00000394611 Q8N3U1 123 aa6.28□□□□□ -1.4
RTN4-206ENST00000394611 KLK12Q9UKR0 248 aa6.28□□□□□ -1.4
RTN4-206ENST00000394611 FAM240AA0A1B0GVK7 77 aa6.27□□□□□ -1.41
RTN4-206ENST00000394611 TRBV7-7A0A0K0K1E9 115 aa6.27□□□□□ -1.41
RTN4-206ENST00000394611 CCL24O00175 119 aa6.27□□□□□ -1.41
RTN4-206ENST00000394611 CDC42SE2Q9NRR3 84 aa6.27□□□□□ -1.41
RTN4-206ENST00000394611 RPL28P46779 137 aaKnown RBP6.27□□□□□ -1.41
RTN4-206ENST00000394611 NTM-AS1Q6ZSK4 140 aa6.27□□□□□ -1.41
RTN4-206ENST00000394611 MXRA5Q9NR99 2828 aa6.27□□□□□ -1.41
RTN4-206ENST00000394611 DEFB135Q30KP9 77 aa6.26□□□□□ -1.41
RTN4-206ENST00000394611 LINC00482Q8N8I6 264 aa6.26□□□□□ -1.41
RTN4-206ENST00000394611 KRTAP1-1Q07627 177 aa6.26□□□□□ -1.41
RTN4-206ENST00000394611 H3BUA1 57 aa6.25□□□□□ -1.41
RTN4-206ENST00000394611 FHL2Q14192 279 aa6.25□□□□□ -1.41
RTN4-206ENST00000394611 FAM19A4Q96LR4 140 aa6.25□□□□□ -1.41
RTN4-206ENST00000394611 IMUPQ9GZP8 106 aa6.25□□□□□ -1.41
RTN4-206ENST00000394611 IGLV1-40P01703 118 aa6.25□□□□□ -1.41
RTN4-206ENST00000394611 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.25□□□□□ -1.41
RTN4-206ENST00000394611 C6orf223Q8N319 242 aa6.25□□□□□ -1.41
RTN4-206ENST00000394611 ANK3Q12955 4377 aaKnown RBP6.24□□□□□ -1.41
RTN4-206ENST00000394611 LY6G6DO95868 133 aa6.24□□□□□ -1.41
RTN4-206ENST00000394611 TMEM258P61165 79 aa6.24□□□□□ -1.41
RTN4-206ENST00000394611 DPH3Q96FX2 82 aa6.24□□□□□ -1.41
RTN4-206ENST00000394611 TRBV10-1A0A0K0K1A3 114 aa6.24□□□□□ -1.41
RTN4-206ENST00000394611 DEFB114Q30KQ6 69 aa6.24□□□□□ -1.41
RTN4-206ENST00000394611 ODF3L2Q3SX64 289 aa6.24□□□□□ -1.41
RTN4-206ENST00000394611 ZNF561-AS1K7EIQ3 104 aa6.23□□□□□ -1.41
RTN4-206ENST00000394611 SPAG11BQ08648 103 aa6.23□□□□□ -1.41
RTN4-206ENST00000394611 TIMM17BO60830 172 aa6.23□□□□□ -1.41
RTN4-206ENST00000394611 TMEM256-PLSCR3K7ERE1 68 aa6.22□□□□□ -1.41
RTN4-206ENST00000394611 C1orf158Q8N1D5 194 aa6.22□□□□□ -1.41
RTN4-206ENST00000394611 IGKV2-28A0A075B6P5 120 aa6.22□□□□□ -1.41
RTN4-206ENST00000394611 TMEM89A2RUT3 159 aa6.22□□□□□ -1.41
RTN4-206ENST00000394611 IGKV2D-28P01615 120 aa6.22□□□□□ -1.41
RTN4-206ENST00000394611 TRBV6-8A0A0A6YYG3 113 aa6.22□□□□□ -1.41
RTN4-206ENST00000394611 UNQ6190/PRO20217Q6UXQ8 127 aa6.22□□□□□ -1.41
RTN4-206ENST00000394611 LINC01561Q8N1V8 128 aa6.22□□□□□ -1.41
RTN4-206ENST00000394611 A0A096LNI7 61 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms