RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 C6orf226Q5I0X4 101 aa7.66□□□□□ -1.18
CXCL12-203ENST00000374429 ANK3Q12955 4377 aaKnown RBP7.66□□□□□ -1.18
CXCL12-203ENST00000374429 MALP21145 153 aa7.66□□□□□ -1.18
CXCL12-203ENST00000374429 C16orf74Q96GX8 76 aa7.66□□□□□ -1.18
CXCL12-203ENST00000374429 IGHV3-30P01768 117 aa7.66□□□□□ -1.18
CXCL12-203ENST00000374429 IGHV3-33P01772 117 aa7.66□□□□□ -1.18
CXCL12-203ENST00000374429 IGHV3-30-5P0DP03 117 aa7.66□□□□□ -1.18
CXCL12-203ENST00000374429 COX7CP15954 63 aa7.66□□□□□ -1.18
CXCL12-203ENST00000374429 DPH3Q96FX2 82 aa7.66□□□□□ -1.18
CXCL12-203ENST00000374429 LINC00242Q5T6M2 205 aa7.65□□□□□ -1.18
CXCL12-203ENST00000374429 IGHV1-58A0A0C4DH39 117 aa7.65□□□□□ -1.18
CXCL12-203ENST00000374429 CIRBPQ14011 172 aaKnown RBP7.65□□□□□ -1.18
CXCL12-203ENST00000374429 SBSPONQ8IVN8 264 aa7.65□□□□□ -1.18
CXCL12-203ENST00000374429 UBE2D1P51668 147 aa7.65□□□□□ -1.19
CXCL12-203ENST00000374429 LINC00269Q8N2A0 174 aa7.64□□□□□ -1.19
CXCL12-203ENST00000374429 CELA1Q9UNI1 258 aa7.64□□□□□ -1.19
CXCL12-203ENST00000374429 PYGO1Q9Y3Y4 419 aa7.64□□□□□ -1.19
CXCL12-203ENST00000374429 LINC00336Q6ZUF6 198 aa7.63□□□□□ -1.19
CXCL12-203ENST00000374429 IGHV4-28A0A0C4DH34 117 aa7.63□□□□□ -1.19
CXCL12-203ENST00000374429 PRR3P79522 188 aaKnown RBP7.63□□□□□ -1.19
CXCL12-203ENST00000374429 C1orf195Q5TG92 126 aa7.63□□□□□ -1.19
CXCL12-203ENST00000374429 SPANXCQ9NY87 97 aa7.63□□□□□ -1.19
CXCL12-203ENST00000374429 C9orf116Q5BN46 136 aaPredicted RBP7.62□□□□□ -1.19
CXCL12-203ENST00000374429 C19orf73Q9NVV2 129 aa7.62□□□□□ -1.19
CXCL12-203ENST00000374429 FHL2Q14192 279 aa7.62□□□□□ -1.19
CXCL12-203ENST00000374429 FAM104AQ969W3 186 aa7.62□□□□□ -1.19
CXCL12-203ENST00000374429 TMEM258P61165 79 aa7.61□□□□□ -1.19
CXCL12-203ENST00000374429 BRK1Q8WUW1 75 aa7.61□□□□□ -1.19
CXCL12-203ENST00000374429 KLK12Q9UKR0 248 aa7.61□□□□□ -1.19
CXCL12-203ENST00000374429 TRBV7-7A0A0K0K1E9 115 aa7.61□□□□□ -1.19
CXCL12-203ENST00000374429 TRBV10-2A0A0K0K1G8 114 aa7.61□□□□□ -1.19
CXCL12-203ENST00000374429 IGHV4-30-4P0DP06 118 aa7.61□□□□□ -1.19
CXCL12-203ENST00000374429 DAZ2Q13117 558 aaKnown RBP7.61□□□□□ -1.19
CXCL12-203ENST00000374429 DAZ4Q86SG3 579 aaKnown RBP7.61□□□□□ -1.19
CXCL12-203ENST00000374429 MIR7-3HGQ8N6C7 128 aa7.61□□□□□ -1.19
CXCL12-203ENST00000374429 DAZ3Q9NR90 486 aaKnown RBP7.61□□□□□ -1.19
CXCL12-203ENST00000374429 MRPS36P82909 103 aaKnown RBP7.61□□□□□ -1.19
CXCL12-203ENST00000374429 TRBV6-8A0A0A6YYG3 113 aa7.6□□□□□ -1.19
CXCL12-203ENST00000374429 CDC42SE2Q9NRR3 84 aa7.6□□□□□ -1.19
CXCL12-203ENST00000374429 BEAN1Q3B7T3 259 aa7.6□□□□□ -1.19
CXCL12-203ENST00000374429 Q9HAA7 133 aa7.6□□□□□ -1.19
CXCL12-203ENST00000374429 PLAC8L1A1L4L8 177 aa7.6□□□□□ -1.19
CXCL12-203ENST00000374429 TRIAP1O43715 76 aa7.6□□□□□ -1.19
CXCL12-203ENST00000374429 C9orf66Q5T8R8 295 aa7.6□□□□□ -1.19
CXCL12-203ENST00000374429 AMELXQ99217 191 aa7.6□□□□□ -1.19
CXCL12-203ENST00000374429 CSMD3Q7Z407 3707 aa7.59□□□□□ -1.19
CXCL12-203ENST00000374429 ATP5G1P05496 136 aa7.59□□□□□ -1.19
CXCL12-203ENST00000374429 COX6CP09669 75 aa7.59□□□□□ -1.19
CXCL12-203ENST00000374429 ATOX1O00244 68 aa7.58□□□□□ -1.2
CXCL12-203ENST00000374429 Q5XG85 94 aa7.58□□□□□ -1.2
CXCL12-203ENST00000374429 OXTP01178 125 aa7.58□□□□□ -1.2
CXCL12-203ENST00000374429 CRYGAP11844 174 aa7.58□□□□□ -1.2
CXCL12-203ENST00000374429 C16orf95Q9H693 158 aa7.58□□□□□ -1.2
CXCL12-203ENST00000374429 SMIM1B2RUZ4 78 aa7.57□□□□□ -1.2
CXCL12-203ENST00000374429 IMUPQ9GZP8 106 aa7.57□□□□□ -1.2
CXCL12-203ENST00000374429 CSNK1G2-AS1Q8NCQ2 148 aa7.57□□□□□ -1.2
CXCL12-203ENST00000374429 PRO0255Q9UI72 69 aa7.57□□□□□ -1.2
CXCL12-203ENST00000374429 CYSTM1Q9H1C7 97 aa7.57□□□□□ -1.2
CXCL12-203ENST00000374429 IL17DQ8TAD2 202 aa7.56□□□□□ -1.2
CXCL12-203ENST00000374429 X6R8D5 127 aa7.56□□□□□ -1.2
CXCL12-203ENST00000374429 TRBV10-1A0A0K0K1A3 114 aa7.56□□□□□ -1.2
CXCL12-203ENST00000374429 CMC4P56277 68 aaPredicted RBP7.56□□□□□ -1.2
CXCL12-203ENST00000374429 HIGD2BQ4VC39 106 aa7.56□□□□□ -1.2
CXCL12-203ENST00000374429 LINC00643Q86TS7 51 aa7.56□□□□□ -1.2
CXCL12-203ENST00000374429 SLPIP03973 132 aa7.55□□□□□ -1.2
CXCL12-203ENST00000374429 COX7B2Q8TF08 81 aa7.55□□□□□ -1.2
CXCL12-203ENST00000374429 ICOSQ9Y6W8 199 aa7.55□□□□□ -1.2
CXCL12-203ENST00000374429 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.55□□□□□ -1.2
CXCL12-203ENST00000374429 C6orf223Q8N319 242 aa7.55□□□□□ -1.2
CXCL12-203ENST00000374429 LINC00308Q8TCZ7 52 aa7.55□□□□□ -1.2
CXCL12-203ENST00000374429 SS18Q15532 418 aa7.55□□□□□ -1.2
CXCL12-203ENST00000374429 MIAQ16674 131 aa7.55□□□□□ -1.2
CXCL12-203ENST00000374429 SPANXDQ9BXN6 97 aa7.55□□□□□ -1.2
CXCL12-203ENST00000374429 CYSRT1A8MQ03 144 aa7.54□□□□□ -1.2
CXCL12-203ENST00000374429 APOC4P55056 127 aa7.54□□□□□ -1.2
CXCL12-203ENST00000374429 SOSTDC1Q6X4U4 206 aa7.54□□□□□ -1.2
CXCL12-203ENST00000374429 C2orf48Q96LS8 159 aa7.54□□□□□ -1.2
CXCL12-203ENST00000374429 TRBV6-4A0A1B0GX49 114 aa7.54□□□□□ -1.2
CXCL12-203ENST00000374429 SND1-IT1Q9HBX3 110 aa7.54□□□□□ -1.2
CXCL12-203ENST00000374429 H7C423 109 aa7.53□□□□□ -1.2
CXCL12-203ENST00000374429 NANOS2P60321 138 aaKnown RBP7.53□□□□□ -1.2
CXCL12-203ENST00000374429 XAGE1AQ9HD64 81 aa7.53□□□□□ -1.2
CXCL12-203ENST00000374429 FAM240AA0A1B0GVK7 77 aa7.53□□□□□ -1.2
CXCL12-203ENST00000374429 A8MTW9 85 aa7.53□□□□□ -1.2
CXCL12-203ENST00000374429 LECT2O14960 151 aa7.53□□□□□ -1.2
CXCL12-203ENST00000374429 LINC00959A0A1B0GUT2 108 aa7.52□□□□□ -1.21
CXCL12-203ENST00000374429 SPART-AS1P0CW21 52 aa7.52□□□□□ -1.21
CXCL12-203ENST00000374429 KRTAP24-1Q3LI83 254 aa7.52□□□□□ -1.21
CXCL12-203ENST00000374429 Q6ZTC4 211 aa7.52□□□□□ -1.21
CXCL12-203ENST00000374429 IGKV3D-7A0A0C4DH55 119 aa7.52□□□□□ -1.21
CXCL12-203ENST00000374429 H3BT86 120 aa7.52□□□□□ -1.21
CXCL12-203ENST00000374429 CRPP02741 224 aa7.52□□□□□ -1.21
CXCL12-203ENST00000374429 ACYP1P07311 99 aa7.52□□□□□ -1.21
CXCL12-203ENST00000374429 SDIM1Q6ZPB5 146 aa7.52□□□□□ -1.21
CXCL12-203ENST00000374429 NCR3O14931 201 aa7.51□□□□□ -1.21
CXCL12-203ENST00000374429 REG3AQ06141 175 aa7.51□□□□□ -1.21
CXCL12-203ENST00000374429 CHCHD10Q8WYQ3 142 aaPredicted RBP7.51□□□□□ -1.21
CXCL12-203ENST00000374429 LITAFQ99732 161 aa7.5□□□□□ -1.21
CXCL12-203ENST00000374429 SERP2Q8N6R1 65 aa7.5□□□□□ -1.21
CXCL12-203ENST00000374429 A0A0J9YWU9 116 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms