RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 A0A087WYN8 130 aa13.48□□□□□ -0.25
CMTM3-201ENST00000361909 A0A1W2PRX2 142 aa13.48□□□□□ -0.25
CMTM3-201ENST00000361909 MIR7-3HGQ8N6C7 128 aa13.48□□□□□ -0.25
CMTM3-201ENST00000361909 COX7B2Q8TF08 81 aa13.47□□□□□ -0.25
CMTM3-201ENST00000361909 K7EQD1 137 aa13.46□□□□□ -0.25
CMTM3-201ENST00000361909 IGKV3D-7A0A0C4DH55 119 aa13.45□□□□□ -0.26
CMTM3-201ENST00000361909 DEFB114Q30KQ6 69 aa13.45□□□□□ -0.26
CMTM3-201ENST00000361909 LINC01561Q8N1V8 128 aa13.45□□□□□ -0.26
CMTM3-201ENST00000361909 IL17DQ8TAD2 202 aa13.45□□□□□ -0.26
CMTM3-201ENST00000361909 IBA57-AS1B1ANH7 110 aa13.44□□□□□ -0.26
CMTM3-201ENST00000361909 DYNLRB2Q8TF09 96 aa13.44□□□□□ -0.26
CMTM3-201ENST00000361909 TRAV25A0A0B4J276 109 aa13.44□□□□□ -0.26
CMTM3-201ENST00000361909 NTM-AS1Q6ZSK4 140 aa13.43□□□□□ -0.26
CMTM3-201ENST00000361909 NDUFC2O95298 119 aa13.42□□□□□ -0.26
CMTM3-201ENST00000361909 CYSTM1Q9H1C7 97 aa13.42□□□□□ -0.26
CMTM3-201ENST00000361909 ORMDL1Q9P0S3 153 aa13.42□□□□□ -0.26
CMTM3-201ENST00000361909 UBE2L6O14933 153 aa13.42□□□□□ -0.26
CMTM3-201ENST00000361909 CCKP06307 115 aa13.42□□□□□ -0.26
CMTM3-201ENST00000361909 TMEM243Q9BU79 118 aa13.42□□□□□ -0.26
CMTM3-201ENST00000361909 MAP6D1Q9H9H5 199 aa13.42□□□□□ -0.26
CMTM3-201ENST00000361909 JMJD7-PLA2G4BH0Y9G9 81 aa13.41□□□□□ -0.26
CMTM3-201ENST00000361909 LECT2O14960 151 aa13.41□□□□□ -0.26
CMTM3-201ENST00000361909 PRM2P04554 102 aa13.41□□□□□ -0.26
CMTM3-201ENST00000361909 KRTAP10-3P60369 221 aa13.41□□□□□ -0.26
CMTM3-201ENST00000361909 SETXQ7Z333 2677 aaKnown RBP13.41□□□□□ -0.26
CMTM3-201ENST00000361909 CCL18P55774 89 aa13.4□□□□□ -0.26
CMTM3-201ENST00000361909 C9orf129Q5T035 196 aaKnown RBP13.4□□□□□ -0.26
CMTM3-201ENST00000361909 LINC00158P58513 81 aa13.39□□□□□ -0.27
CMTM3-201ENST00000361909 LINC00167Q96N53 147 aa13.39□□□□□ -0.27
CMTM3-201ENST00000361909 BAHCC1Q9P281 2608 aa13.39□□□□□ -0.27
CMTM3-201ENST00000361909 TRBV10-3A0A0K0K1G6 114 aa13.39□□□□□ -0.27
CMTM3-201ENST00000361909 F8P00451 2351 aa13.39□□□□□ -0.27
CMTM3-201ENST00000361909 A0A087WVE0 104 aa13.38□□□□□ -0.27
CMTM3-201ENST00000361909 KIR2DL5BQ8NHK3 375 aa13.38□□□□□ -0.27
CMTM3-201ENST00000361909 C2CD3Q4AC94 2353 aa13.37□□□□□ -0.27
CMTM3-201ENST00000361909 TRGV1A0A0A0MS02 117 aa13.37□□□□□ -0.27
CMTM3-201ENST00000361909 NCR3O14931 201 aa13.37□□□□□ -0.27
CMTM3-201ENST00000361909 TRBV6-4A0A1B0GX49 114 aa13.36□□□□□ -0.27
CMTM3-201ENST00000361909 BCE1O60756 84 aa13.36□□□□□ -0.27
CMTM3-201ENST00000361909 SETD2Q9BYW2 2564 aaPredicted RBP13.36□□□□□ -0.27
CMTM3-201ENST00000361909 LYPD5Q6UWN5 251 aa13.35□□□□□ -0.27
CMTM3-201ENST00000361909 DSCR8Q96T75 97 aa13.34□□□□□ -0.27
CMTM3-201ENST00000361909 SS18Q15532 418 aa13.33□□□□□ -0.28
CMTM3-201ENST00000361909 TOMM7Q9P0U1 55 aa13.33□□□□□ -0.28
CMTM3-201ENST00000361909 PAX4O43316 350 aa13.32□□□□□ -0.28
CMTM3-201ENST00000361909 GHRHP01286 108 aa13.32□□□□□ -0.28
CMTM3-201ENST00000361909 IGLV1-51P01701 117 aa13.32□□□□□ -0.28
CMTM3-201ENST00000361909 CMC4P56277 68 aaPredicted RBP13.32□□□□□ -0.28
CMTM3-201ENST00000361909 WNK1Q9H4A3 2382 aa13.32□□□□□ -0.28
CMTM3-201ENST00000361909 A0A087WZ39 114 aa13.31□□□□□ -0.28
CMTM3-201ENST00000361909 TMEM256-PLSCR3K7ERE1 68 aa13.31□□□□□ -0.28
CMTM3-201ENST00000361909 OXTP01178 125 aa13.31□□□□□ -0.28
CMTM3-201ENST00000361909 IGHV3OR16-9A0A0B4J2B5 98 aa13.31□□□□□ -0.28
CMTM3-201ENST00000361909 LINC00482Q8N8I6 264 aa13.31□□□□□ -0.28
CMTM3-201ENST00000361909 CYSRT1A8MQ03 144 aa13.3□□□□□ -0.28
CMTM3-201ENST00000361909 Q5XG85 94 aa13.3□□□□□ -0.28
CMTM3-201ENST00000361909 SORL1Q92673 2214 aa13.3□□□□□ -0.28
CMTM3-201ENST00000361909 FHL2Q14192 279 aa13.29□□□□□ -0.28
CMTM3-201ENST00000361909 C1orf158Q8N1D5 194 aa13.29□□□□□ -0.28
CMTM3-201ENST00000361909 UBL5Q9BZL1 73 aa13.28□□□□□ -0.28
CMTM3-201ENST00000361909 XCL2Q9UBD3 114 aa13.28□□□□□ -0.28
CMTM3-201ENST00000361909 ODF3L2Q3SX64 289 aa13.27□□□□□ -0.28
CMTM3-201ENST00000361909 Q6ZTI0 123 aa13.27□□□□□ -0.28
CMTM3-201ENST00000361909 STHQ8IWL8 128 aa13.27□□□□□ -0.29
CMTM3-201ENST00000361909 MRAPQ8TCY5 172 aa13.27□□□□□ -0.29
CMTM3-201ENST00000361909 FAM236DA0A1B0GTK5 79 aa13.25□□□□□ -0.29
CMTM3-201ENST00000361909 SLPIP03973 132 aa13.25□□□□□ -0.29
CMTM3-201ENST00000361909 FAM236CP0DP71 79 aa13.25□□□□□ -0.29
CMTM3-201ENST00000361909 Q8N814 137 aa13.25□□□□□ -0.29
CMTM3-201ENST00000361909 PFN2P35080 140 aa13.24□□□□□ -0.29
CMTM3-201ENST00000361909 EPM2AB3EWF7 344 aa13.24□□□□□ -0.29
CMTM3-201ENST00000361909 SERP1Q9Y6X1 66 aa13.22□□□□□ -0.29
CMTM3-201ENST00000361909 C4orf26Q17RF5 130 aa13.22□□□□□ -0.29
CMTM3-201ENST00000361909 NIPBLQ6KC79 2804 aaeCLIP13.22□□□□□ -0.29
CMTM3-201ENST00000361909 TRAV7A0A075B6U4 112 aa13.21□□□□□ -0.29
CMTM3-201ENST00000361909 TRAV23DV6A0A075B6W5 121 aa13.21□□□□□ -0.29
CMTM3-201ENST00000361909 TRBV6-8A0A0A6YYG3 113 aa13.21□□□□□ -0.3
CMTM3-201ENST00000361909 C9orf66Q5T8R8 295 aa13.21□□□□□ -0.3
CMTM3-201ENST00000361909 C16orf74Q96GX8 76 aa13.21□□□□□ -0.3
CMTM3-201ENST00000361909 XCL1P47992 114 aa13.2□□□□□ -0.3
CMTM3-201ENST00000361909 ENHOQ6UWT2 76 aa13.2□□□□□ -0.3
CMTM3-201ENST00000361909 Q8IZM0 81 aa13.2□□□□□ -0.3
CMTM3-201ENST00000361909 C6orf226Q5I0X4 101 aa13.2□□□□□ -0.3
CMTM3-201ENST00000361909 HRCT1Q6UXD1 115 aa13.2□□□□□ -0.3
CMTM3-201ENST00000361909 KRTAP24-1Q3LI83 254 aa13.19□□□□□ -0.3
CMTM3-201ENST00000361909 C19orf73Q9NVV2 129 aa13.19□□□□□ -0.3
CMTM3-201ENST00000361909 C20orf197Q8N268 126 aa13.18□□□□□ -0.3
CMTM3-201ENST00000361909 JMJD1CQ15652 2540 aa13.18□□□□□ -0.3
CMTM3-201ENST00000361909 IGLV4-60A0A075B6I1 120 aa13.18□□□□□ -0.3
CMTM3-201ENST00000361909 FAM19A1Q7Z5A9 133 aa13.18□□□□□ -0.3
CMTM3-201ENST00000361909 WFDC9Q8NEX5 89 aa13.17□□□□□ -0.3
CMTM3-201ENST00000361909 NOP10Q9NPE3 64 aaKnown RBP13.17□□□□□ -0.3
CMTM3-201ENST00000361909 LOC110117498A0A087WWA1 95 aa13.17□□□□□ -0.3
CMTM3-201ENST00000361909 NANOS2P60321 138 aaKnown RBP13.17□□□□□ -0.3
CMTM3-201ENST00000361909 COX17Q14061 63 aa13.17□□□□□ -0.3
CMTM3-201ENST00000361909 TRGV2A0A075B6R0 118 aa13.16□□□□□ -0.3
CMTM3-201ENST00000361909 IGKV3OR2-268A0A0C4DH90 116 aa13.16□□□□□ -0.3
CMTM3-201ENST00000361909 LINC00959A0A1B0GUT2 108 aa13.16□□□□□ -0.3
CMTM3-201ENST00000361909 KLKP1Q107X0 134 aa13.16□□□□□ -0.3
CMTM3-201ENST00000361909 H3BQ85 93 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms