RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 DHRS4-AS1Q9P1J3 65 aa6.86□□□□□ -1.31
GABPA-201ENST00000354828 CHD6Q8TD26 2715 aa6.86□□□□□ -1.31
GABPA-201ENST00000354828 COX17Q14061 63 aa6.86□□□□□ -1.31
GABPA-201ENST00000354828 C9orf116Q5BN46 136 aaPredicted RBP6.86□□□□□ -1.31
GABPA-201ENST00000354828 K7EP13 123 aa6.85□□□□□ -1.31
GABPA-201ENST00000354828 CDPF1Q6NVV7 123 aa6.85□□□□□ -1.31
GABPA-201ENST00000354828 A0A1B0GX51 115 aa6.85□□□□□ -1.31
GABPA-201ENST00000354828 PDE6GP18545 87 aa6.85□□□□□ -1.31
GABPA-201ENST00000354828 COL27A1Q8IZC6 1860 aaPredicted RBP6.85□□□□□ -1.31
GABPA-201ENST00000354828 X6R8D5 127 aa6.85□□□□□ -1.31
GABPA-201ENST00000354828 SLPIP03973 132 aa6.84□□□□□ -1.31
GABPA-201ENST00000354828 K7EIL1 84 aa6.84□□□□□ -1.31
GABPA-201ENST00000354828 TEP1Q99973 2627 aaKnown RBP6.84□□□□□ -1.31
GABPA-201ENST00000354828 A0A1B0GUV1 79 aa6.83□□□□□ -1.32
GABPA-201ENST00000354828 C11orf72Q8NBR9 251 aa6.83□□□□□ -1.32
GABPA-201ENST00000354828 MP68P56378 58 aa6.83□□□□□ -1.32
GABPA-201ENST00000354828 PTH2Q96A98 100 aa6.83□□□□□ -1.32
GABPA-201ENST00000354828 A0A0B4J2C4 111 aa6.83□□□□□ -1.32
GABPA-201ENST00000354828 ZNF73O43830 326 aaPredicted RBP6.83□□□□□ -1.32
GABPA-201ENST00000354828 IGKV3D-7A0A0C4DH55 119 aa6.82□□□□□ -1.32
GABPA-201ENST00000354828 C16orf90A8MZG2 172 aa6.82□□□□□ -1.32
GABPA-201ENST00000354828 KRTAP1-3Q8IUG1 177 aa6.82□□□□□ -1.32
GABPA-201ENST00000354828 C14orf132Q9NPU4 83 aa6.82□□□□□ -1.32
GABPA-201ENST00000354828 IGIPA6NJ69 53 aa6.82□□□□□ -1.32
GABPA-201ENST00000354828 ACYP1P07311 99 aa6.81□□□□□ -1.32
GABPA-201ENST00000354828 Q6ZQY7 126 aa6.81□□□□□ -1.32
GABPA-201ENST00000354828 MAPKAPK5-AS1Q8N8E1 139 aa6.81□□□□□ -1.32
GABPA-201ENST00000354828 SS18L2Q9UHA2 77 aa6.81□□□□□ -1.32
GABPA-201ENST00000354828 SETXQ7Z333 2677 aaKnown RBP6.81□□□□□ -1.32
GABPA-201ENST00000354828 CHKB-CPT1BH3BT56 60 aa6.81□□□□□ -1.32
GABPA-201ENST00000354828 VPS13AQ96RL7 3174 aa6.81□□□□□ -1.32
GABPA-201ENST00000354828 BPY2O14599 106 aa6.81□□□□□ -1.32
GABPA-201ENST00000354828 IGKV4-1P06312 121 aa6.81□□□□□ -1.32
GABPA-201ENST00000354828 CIRBP-AS1Q8TBR5 109 aa6.81□□□□□ -1.32
GABPA-201ENST00000354828 KRTAP10-11P60412 298 aa6.81□□□□□ -1.32
GABPA-201ENST00000354828 REG3GQ6UW15 175 aa6.81□□□□□ -1.32
GABPA-201ENST00000354828 COX8CQ7Z4L0 72 aa6.81□□□□□ -1.32
GABPA-201ENST00000354828 NBDYA0A0U1RRE5 68 aa6.8□□□□□ -1.32
GABPA-201ENST00000354828 PCP4P48539 62 aa6.8□□□□□ -1.32
GABPA-201ENST00000354828 TIMM17BO60830 172 aa6.8□□□□□ -1.32
GABPA-201ENST00000354828 CFAP54Q96N23 3096 aa6.8□□□□□ -1.32
GABPA-201ENST00000354828 SMIM1B2RUZ4 78 aa6.8□□□□□ -1.32
GABPA-201ENST00000354828 NDUFC2-KCTD14E9PQ53 114 aa6.8□□□□□ -1.32
GABPA-201ENST00000354828 TCL1BO95988 128 aa6.8□□□□□ -1.32
GABPA-201ENST00000354828 C2orf48Q96LS8 159 aa6.8□□□□□ -1.32
GABPA-201ENST00000354828 CSDC2Q9Y534 153 aaKnown RBP6.8□□□□□ -1.32
GABPA-201ENST00000354828 FAM229AH3BQW9 127 aa6.8□□□□□ -1.32
GABPA-201ENST00000354828 H3BT86 120 aa6.8□□□□□ -1.32
GABPA-201ENST00000354828 LINC00315P59091 139 aa6.8□□□□□ -1.32
GABPA-201ENST00000354828 Q8NAQ8 132 aa6.8□□□□□ -1.32
GABPA-201ENST00000354828 BAHCC1Q9P281 2608 aa6.79□□□□□ -1.32
GABPA-201ENST00000354828 C3orf84H3BNL1 204 aa6.79□□□□□ -1.32
GABPA-201ENST00000354828 UNC79Q9P2D8 2635 aa6.79□□□□□ -1.32
GABPA-201ENST00000354828 CCKP06307 115 aa6.79□□□□□ -1.32
GABPA-201ENST00000354828 H3BNG1 76 aa6.78□□□□□ -1.32
GABPA-201ENST00000354828 F8WDY8 70 aa6.78□□□□□ -1.32
GABPA-201ENST00000354828 KRTAP10-3P60369 221 aa6.78□□□□□ -1.32
GABPA-201ENST00000354828 UPK3BQ9BT76 320 aa6.78□□□□□ -1.32
GABPA-201ENST00000354828 Q6ZRU5 148 aa6.78□□□□□ -1.32
GABPA-201ENST00000354828 TRBV10-3A0A0K0K1G6 114 aa6.77□□□□□ -1.33
GABPA-201ENST00000354828 KRTAP1-1Q07627 177 aa6.77□□□□□ -1.33
GABPA-201ENST00000354828 MRPL55Q7Z7F7 128 aaKnown RBP6.77□□□□□ -1.33
GABPA-201ENST00000354828 BPTFQ12830 3046 aa6.77□□□□□ -1.33
GABPA-201ENST00000354828 C10orf25Q5T742 122 aa6.77□□□□□ -1.33
GABPA-201ENST00000354828 TEN1Q86WV5 123 aa6.77□□□□□ -1.33
GABPA-201ENST00000354828 LINC00588Q9Y4M8 146 aa6.76□□□□□ -1.33
GABPA-201ENST00000354828 VCANP13611 3396 aa6.76□□□□□ -1.33
GABPA-201ENST00000354828 SMIM11BQ8TCY0 68 aa6.76□□□□□ -1.33
GABPA-201ENST00000354828 MUC4Q99102 2169 aa6.76□□□□□ -1.33
GABPA-201ENST00000354828 XGP55808 180 aa6.75□□□□□ -1.33
GABPA-201ENST00000354828 PRR3P79522 188 aaKnown RBP6.75□□□□□ -1.33
GABPA-201ENST00000354828 WFDC2Q14508 124 aa6.75□□□□□ -1.33
GABPA-201ENST00000354828 TRIAP1O43715 76 aa6.74□□□□□ -1.33
GABPA-201ENST00000354828 RTL8CO15255 209 aa6.74□□□□□ -1.33
GABPA-201ENST00000354828 SCXQ7RTU7 201 aa6.74□□□□□ -1.33
GABPA-201ENST00000354828 AMELXQ99217 191 aa6.74□□□□□ -1.33
GABPA-201ENST00000354828 TP73-AS1Q9UF72 201 aa6.74□□□□□ -1.33
GABPA-201ENST00000354828 FAM19A4Q96LR4 140 aa6.73□□□□□ -1.33
GABPA-201ENST00000354828 CASC2Q6XLA1 102 aa6.73□□□□□ -1.33
GABPA-201ENST00000354828 TAX1BP3O14907 124 aa6.72□□□□□ -1.33
GABPA-201ENST00000354828 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.72□□□□□ -1.33
GABPA-201ENST00000354828 KIF25-AS1Q9Y6Z4 181 aa6.72□□□□□ -1.33
GABPA-201ENST00000354828 LAMA1P25391 3075 aa6.72□□□□□ -1.33
GABPA-201ENST00000354828 NTM-AS1Q6ZSK4 140 aa6.71□□□□□ -1.33
GABPA-201ENST00000354828 C19orf73Q9NVV2 129 aa6.71□□□□□ -1.33
GABPA-201ENST00000354828 MAP1AP78559 2803 aaPredicted RBP6.71□□□□□ -1.34
GABPA-201ENST00000354828 PRLHP81277 87 aa6.71□□□□□ -1.34
GABPA-201ENST00000354828 C22orf24Q9Y442 160 aa6.71□□□□□ -1.34
GABPA-201ENST00000354828 STAB1Q9NY15 2570 aa6.7□□□□□ -1.34
GABPA-201ENST00000354828 J3QL48 77 aa6.7□□□□□ -1.34
GABPA-201ENST00000354828 LINC01561Q8N1V8 128 aa6.7□□□□□ -1.34
GABPA-201ENST00000354828 LST1O00453 97 aa6.69□□□□□ -1.34
GABPA-201ENST00000354828 NDUFV3P56181 108 aaKnown RBP6.69□□□□□ -1.34
GABPA-201ENST00000354828 FRYLO94915 3013 aa6.69□□□□□ -1.34
GABPA-201ENST00000354828 KLK9Q2XQG4 91 aa6.69□□□□□ -1.34
GABPA-201ENST00000354828 PRYO14603 147 aa6.69□□□□□ -1.34
GABPA-201ENST00000354828 Q8N3U1 123 aa6.69□□□□□ -1.34
GABPA-201ENST00000354828 YPEL4Q96NS1 127 aa6.69□□□□□ -1.34
GABPA-201ENST00000354828 Q9BRP9 147 aa6.69□□□□□ -1.34
GABPA-201ENST00000354828 TEX49A0A1B0GTD5 131 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms