RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 CCDC140Q96MF4 163 aa8.69□□□□□ -1.02
TRAF3-201ENST00000347662 SMIM26A0A096LP01 95 aa8.68□□□□□ -1.02
TRAF3-201ENST00000347662 Q9BRP9 147 aa8.68□□□□□ -1.02
TRAF3-201ENST00000347662 ODF3BA8MYP8 253 aa8.68□□□□□ -1.02
TRAF3-201ENST00000347662 TRBV6-4A0A1B0GX49 114 aa8.67□□□□□ -1.02
TRAF3-201ENST00000347662 ZNF22P17026 224 aaPredicted RBP8.67□□□□□ -1.02
TRAF3-201ENST00000347662 GDF5OSQ5U4N7 250 aa8.67□□□□□ -1.02
TRAF3-201ENST00000347662 ZNF80P51504 273 aaPredicted RBP8.67□□□□□ -1.02
TRAF3-201ENST00000347662 TRBV7-7A0A0K0K1E9 115 aa8.67□□□□□ -1.02
TRAF3-201ENST00000347662 HCG22E2RYF7 251 aa8.66□□□□□ -1.02
TRAF3-201ENST00000347662 OXLD1Q5BKU9 147 aa8.66□□□□□ -1.02
TRAF3-201ENST00000347662 LINC01006Q8NI28 216 aa8.66□□□□□ -1.02
TRAF3-201ENST00000347662 CCDC179H3BU77 68 aa8.66□□□□□ -1.02
TRAF3-201ENST00000347662 LIMD2Q9BT23 127 aa8.66□□□□□ -1.02
TRAF3-201ENST00000347662 LINC00959A0A1B0GUT2 108 aa8.66□□□□□ -1.02
TRAF3-201ENST00000347662 VPREB1P12018 145 aa8.66□□□□□ -1.02
TRAF3-201ENST00000347662 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.66□□□□□ -1.02
TRAF3-201ENST00000347662 A0A1B0GU69 56 aa8.66□□□□□ -1.02
TRAF3-201ENST00000347662 COX7CP15954 63 aa8.66□□□□□ -1.02
TRAF3-201ENST00000347662 A0A0C4DFX4 3053 aa8.65□□□□□ -1.02
TRAF3-201ENST00000347662 XGP55808 180 aa8.65□□□□□ -1.02
TRAF3-201ENST00000347662 IGLV8-61A0A075B6I0 122 aa8.65□□□□□ -1.02
TRAF3-201ENST00000347662 COX17Q14061 63 aa8.65□□□□□ -1.02
TRAF3-201ENST00000347662 C18orf65Q6ZTR6 163 aa8.65□□□□□ -1.02
TRAF3-201ENST00000347662 C1orf134Q5TEV5 83 aa8.65□□□□□ -1.02
TRAF3-201ENST00000347662 Q9UF83 564 aa8.65□□□□□ -1.02
TRAF3-201ENST00000347662 ODF3Q96PU9 254 aa8.65□□□□□ -1.03
TRAF3-201ENST00000347662 MUC22E2RYF6 1773 aaPredicted RBP8.65□□□□□ -1.03
TRAF3-201ENST00000347662 Q6ZS46 218 aa8.64□□□□□ -1.03
TRAF3-201ENST00000347662 CYSRT1A8MQ03 144 aa8.64□□□□□ -1.03
TRAF3-201ENST00000347662 SPACA4Q8TDM5 124 aa8.63□□□□□ -1.03
TRAF3-201ENST00000347662 PRM2P04554 102 aa8.63□□□□□ -1.03
TRAF3-201ENST00000347662 C1orf229Q6ZS94 237 aaPredicted RBP8.63□□□□□ -1.03
TRAF3-201ENST00000347662 K7EQG2 157 aa8.63□□□□□ -1.03
TRAF3-201ENST00000347662 TRAV7A0A075B6U4 112 aa8.63□□□□□ -1.03
TRAF3-201ENST00000347662 FRMD6-AS1P0C7T7 363 aa8.63□□□□□ -1.03
TRAF3-201ENST00000347662 C9orf116Q5BN46 136 aaPredicted RBP8.62□□□□□ -1.03
TRAF3-201ENST00000347662 M0QY20 66 aa8.61□□□□□ -1.03
TRAF3-201ENST00000347662 CPAMD8Q8IZJ3 1885 aa8.61□□□□□ -1.03
TRAF3-201ENST00000347662 MRPS36P82909 103 aaKnown RBP8.61□□□□□ -1.03
TRAF3-201ENST00000347662 MAPKAPK5-AS1Q8N8E1 139 aa8.61□□□□□ -1.03
TRAF3-201ENST00000347662 ZNF702PQ9H963 129 aa8.6□□□□□ -1.03
TRAF3-201ENST00000347662 AVPP01185 164 aa8.6□□□□□ -1.03
TRAF3-201ENST00000347662 BRI3O95415 125 aa8.6□□□□□ -1.03
TRAF3-201ENST00000347662 LINC00575Q6W349 94 aa8.59□□□□□ -1.03
TRAF3-201ENST00000347662 A0A087WSZ3 146 aa8.59□□□□□ -1.03
TRAF3-201ENST00000347662 NTM-AS1Q6ZSK4 140 aa8.59□□□□□ -1.03
TRAF3-201ENST00000347662 MKI67P46013 3256 aaKnown RBP8.59□□□□□ -1.03
TRAF3-201ENST00000347662 HECTD1Q9ULT8 2610 aa8.59□□□□□ -1.03
TRAF3-201ENST00000347662 IMUPQ9GZP8 106 aa8.59□□□□□ -1.03
TRAF3-201ENST00000347662 PRR3P79522 188 aaKnown RBP8.58□□□□□ -1.04
TRAF3-201ENST00000347662 Q6ZPA2 131 aa8.58□□□□□ -1.04
TRAF3-201ENST00000347662 UNQ6190/PRO20217Q6UXQ8 127 aa8.58□□□□□ -1.04
TRAF3-201ENST00000347662 SSBP3-AS1Q7Z2R9 100 aa8.57□□□□□ -1.04
TRAF3-201ENST00000347662 U3KQK5 164 aa8.57□□□□□ -1.04
TRAF3-201ENST00000347662 MAST4O15021 2626 aa8.57□□□□□ -1.04
TRAF3-201ENST00000347662 TRBV10-3A0A0K0K1G6 114 aa8.57□□□□□ -1.04
TRAF3-201ENST00000347662 BRWD1-AS2P59051 145 aa8.56□□□□□ -1.04
TRAF3-201ENST00000347662 FHL2Q14192 279 aa8.56□□□□□ -1.04
TRAF3-201ENST00000347662 NRACQ8N912 160 aa8.56□□□□□ -1.04
TRAF3-201ENST00000347662 LINC00574Q9H8X3 128 aa8.56□□□□□ -1.04
TRAF3-201ENST00000347662 COX6A2Q02221 97 aa8.56□□□□□ -1.04
TRAF3-201ENST00000347662 Q6JHZ5 121 aa8.56□□□□□ -1.04
TRAF3-201ENST00000347662 PSMG3-AS1Q96PY0 264 aa8.56□□□□□ -1.04
TRAF3-201ENST00000347662 COX6B2Q6YFQ2 88 aa8.56□□□□□ -1.04
TRAF3-201ENST00000347662 MRGPRG-AS1Q2M3A8 158 aa8.56□□□□□ -1.04
TRAF3-201ENST00000347662 C1orf64Q8NEQ6 169 aa8.55□□□□□ -1.04
TRAF3-201ENST00000347662 ATRQ13535 2644 aa8.55□□□□□ -1.04
TRAF3-201ENST00000347662 J3QL48 77 aa8.55□□□□□ -1.04
TRAF3-201ENST00000347662 MGAM2Q2M2H8 2515 aa8.55□□□□□ -1.04
TRAF3-201ENST00000347662 Q8N814 137 aa8.55□□□□□ -1.04
TRAF3-201ENST00000347662 RANBP2P49792 3224 aaKnown RBP8.55□□□□□ -1.04
TRAF3-201ENST00000347662 Q8IZM0 81 aa8.54□□□□□ -1.04
TRAF3-201ENST00000347662 TP73-AS1Q9UF72 201 aa8.54□□□□□ -1.04
TRAF3-201ENST00000347662 TSHBP01222 138 aa8.54□□□□□ -1.04
TRAF3-201ENST00000347662 A0A1W2PPR1 153 aa8.54□□□□□ -1.04
TRAF3-201ENST00000347662 FAM229AH3BQW9 127 aa8.53□□□□□ -1.04
TRAF3-201ENST00000347662 TMEM254Q8TBM7 123 aa8.53□□□□□ -1.04
TRAF3-201ENST00000347662 FSTL3O95633 263 aa8.53□□□□□ -1.04
TRAF3-201ENST00000347662 A0A087WVE0 104 aa8.52□□□□□ -1.05
TRAF3-201ENST00000347662 Q8N3U1 123 aa8.52□□□□□ -1.05
TRAF3-201ENST00000347662 MBD6Q96DN6 1003 aa8.51□□□□□ -1.05
TRAF3-201ENST00000347662 ATP11AUNQ6ZP68 121 aa8.51□□□□□ -1.05
TRAF3-201ENST00000347662 CRIP3Q6Q6R5 217 aa8.51□□□□□ -1.05
TRAF3-201ENST00000347662 LAMA3Q16787 3333 aa8.51□□□□□ -1.05
TRAF3-201ENST00000347662 Q6ZTC4 211 aa8.5□□□□□ -1.05
TRAF3-201ENST00000347662 APLNQ9ULZ1 77 aa8.5□□□□□ -1.05
TRAF3-201ENST00000347662 A0A087WYN8 130 aa8.5□□□□□ -1.05
TRAF3-201ENST00000347662 ZNF295-AS1Q8N0V1 137 aa8.5□□□□□ -1.05
TRAF3-201ENST00000347662 EGFEM1PQ0D2K5 195 aa8.49□□□□□ -1.05
TRAF3-201ENST00000347662 PRUNE2Q8WUY3 3088 aa8.49□□□□□ -1.05
TRAF3-201ENST00000347662 BRCA2P51587 3418 aa8.49□□□□□ -1.05
TRAF3-201ENST00000347662 P0C879 139 aa8.49□□□□□ -1.05
TRAF3-201ENST00000347662 MOBPQ13875 183 aa8.49□□□□□ -1.05
TRAF3-201ENST00000347662 C6orf48Q9UBA6 75 aa8.48□□□□□ -1.05
TRAF3-201ENST00000347662 CENPEQ02224 2701 aa8.48□□□□□ -1.05
TRAF3-201ENST00000347662 PTPRBP23467 1997 aa8.48□□□□□ -1.05
TRAF3-201ENST00000347662 CDC42SE2Q9NRR3 84 aa8.48□□□□□ -1.05
TRAF3-201ENST00000347662 CRIP1P50238 77 aa8.46□□□□□ -1.06
TRAF3-201ENST00000347662 MDFIQ99750 246 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms