RNA–Protein interactions for RNA: ENST00000311371.9

SOX30-202, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX30, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-202ENST00000311371 LINC00167Q96N53 147 aa11.35□□□□□ -0.59
SOX30-202ENST00000311371 TRBV7-4A0A0J9YYF1 115 aa11.35□□□□□ -0.59
SOX30-202ENST00000311371 Q6ZQT0 140 aa11.34□□□□□ -0.59
SOX30-202ENST00000311371 A0A096LNT2 108 aa11.34□□□□□ -0.59
SOX30-202ENST00000311371 LAMTOR3Q9UHA4 124 aa11.33□□□□□ -0.6
SOX30-202ENST00000311371 CENPEQ02224 2701 aa11.33□□□□□ -0.6
SOX30-202ENST00000311371 UBE2L6O14933 153 aa11.33□□□□□ -0.6
SOX30-202ENST00000311371 LY6G6DO95868 133 aa11.33□□□□□ -0.6
SOX30-202ENST00000311371 IBA57-AS1B1ANH7 110 aa11.32□□□□□ -0.6
SOX30-202ENST00000311371 K7EQD1 137 aa11.32□□□□□ -0.6
SOX30-202ENST00000311371 TMEM254Q8TBM7 123 aa11.32□□□□□ -0.6
SOX30-202ENST00000311371 NREPQ16612 68 aa11.31□□□□□ -0.6
SOX30-202ENST00000311371 TRBV10-1A0A0K0K1A3 114 aa11.31□□□□□ -0.6
SOX30-202ENST00000311371 H3BUA1 57 aa11.3□□□□□ -0.6
SOX30-202ENST00000311371 CELSR2Q9HCU4 2923 aa11.3□□□□□ -0.6
SOX30-202ENST00000311371 DEFB131AP59861 70 aa11.3□□□□□ -0.6
SOX30-202ENST00000311371 ESRGQ1W209 222 aa11.3□□□□□ -0.6
SOX30-202ENST00000311371 A0A1W2PPR1 153 aa11.29□□□□□ -0.6
SOX30-202ENST00000311371 HELZ2Q9BYK8 2649 aaKnown RBP11.29□□□□□ -0.6
SOX30-202ENST00000311371 NANOS2P60321 138 aaKnown RBP11.29□□□□□ -0.6
SOX30-202ENST00000311371 LRCOL1A6NCL2 159 aa11.29□□□□□ -0.6
SOX30-202ENST00000311371 USP9YO00507 2555 aaPredicted RBP11.28□□□□□ -0.6
SOX30-202ENST00000311371 H3BUX3 64 aa11.27□□□□□ -0.61
SOX30-202ENST00000311371 IGLV1-40P01703 118 aa11.27□□□□□ -0.61
SOX30-202ENST00000311371 C10orf99Q6UWK7 81 aa11.27□□□□□ -0.61
SOX30-202ENST00000311371 TRGV1A0A0A0MS02 117 aa11.26□□□□□ -0.61
SOX30-202ENST00000311371 PLAC8L1A1L4L8 177 aa11.26□□□□□ -0.61
SOX30-202ENST00000311371 FUSP35637 526 aaKnown RBP eCLIP11.26□□□□□ -0.61
SOX30-202ENST00000311371 C6orf226Q5I0X4 101 aa11.26□□□□□ -0.61
SOX30-202ENST00000311371 GCN1Q92616 2671 aaKnown RBP11.26□□□□□ -0.61
SOX30-202ENST00000311371 BPY2O14599 106 aa11.25□□□□□ -0.61
SOX30-202ENST00000311371 CXCL6P80162 114 aa11.25□□□□□ -0.61
SOX30-202ENST00000311371 C6orf99Q4VX62 202 aa11.25□□□□□ -0.61
SOX30-202ENST00000311371 C11orf71Q6IPW1 123 aa11.25□□□□□ -0.61
SOX30-202ENST00000311371 A0A1W2PRX2 142 aa11.25□□□□□ -0.61
SOX30-202ENST00000311371 A8MTW9 85 aa11.25□□□□□ -0.61
SOX30-202ENST00000311371 RETNQ9HD89 108 aa11.25□□□□□ -0.61
SOX30-202ENST00000311371 MAP1AP78559 2803 aaPredicted RBP11.24□□□□□ -0.61
SOX30-202ENST00000311371 PRR15Q8IV56 129 aa11.24□□□□□ -0.61
SOX30-202ENST00000311371 LOC110117498A0A087WWA1 95 aa11.23□□□□□ -0.61
SOX30-202ENST00000311371 PLA2G2AP14555 144 aa11.23□□□□□ -0.61
SOX30-202ENST00000311371 FBN2P35556 2912 aa11.23□□□□□ -0.61
SOX30-202ENST00000311371 CSMD2Q7Z408 3487 aa11.23□□□□□ -0.61
SOX30-202ENST00000311371 PRYO14603 147 aa11.23□□□□□ -0.61
SOX30-202ENST00000311371 DAD1P61803 113 aa11.23□□□□□ -0.61
SOX30-202ENST00000311371 NOTCH3Q9UM47 2321 aa11.23□□□□□ -0.61
SOX30-202ENST00000311371 SPG11Q96JI7 2443 aa11.23□□□□□ -0.61
SOX30-202ENST00000311371 ZNF561-AS1K7EIQ3 104 aa11.22□□□□□ -0.61
SOX30-202ENST00000311371 SPATA3Q8NHX4 192 aa11.22□□□□□ -0.61
SOX30-202ENST00000311371 IGHV3OR16-9A0A0B4J2B5 98 aa11.22□□□□□ -0.61
SOX30-202ENST00000311371 IGLV4-60A0A075B6I1 120 aa11.21□□□□□ -0.61
SOX30-202ENST00000311371 LMO4P61968 165 aa11.21□□□□□ -0.61
SOX30-202ENST00000311371 Q8N9L7 120 aa11.21□□□□□ -0.61
SOX30-202ENST00000311371 Q6ZTC4 211 aa11.2□□□□□ -0.62
SOX30-202ENST00000311371 C6orf223Q8N319 242 aa11.19□□□□□ -0.62
SOX30-202ENST00000311371 J3QKU1 62 aa11.19□□□□□ -0.62
SOX30-202ENST00000311371 IGHV4-38-2P0DP08 117 aa11.19□□□□□ -0.62
SOX30-202ENST00000311371 LINC00575Q6W349 94 aa11.19□□□□□ -0.62
SOX30-202ENST00000311371 CUBNO60494 3623 aa11.18□□□□□ -0.62
SOX30-202ENST00000311371 LOC100131303A0A0U1RQF7 123 aa11.18□□□□□ -0.62
SOX30-202ENST00000311371 DYNLRB2Q8TF09 96 aa11.18□□□□□ -0.62
SOX30-202ENST00000311371 HIGD2AQ9BW72 106 aa11.18□□□□□ -0.62
SOX30-202ENST00000311371 VPS13CQ709C8 3753 aa11.18□□□□□ -0.62
SOX30-202ENST00000311371 TMEM89A2RUT3 159 aa11.18□□□□□ -0.62
SOX30-202ENST00000311371 Q6ZRU5 148 aa11.18□□□□□ -0.62
SOX30-202ENST00000311371 POLQO75417 2590 aa11.17□□□□□ -0.62
SOX30-202ENST00000311371 UBE2E2Q96LR5 201 aa11.17□□□□□ -0.62
SOX30-202ENST00000311371 ABCA12Q86UK0 2595 aa11.17□□□□□ -0.62
SOX30-202ENST00000311371 A6NDX4 124 aa11.17□□□□□ -0.62
SOX30-202ENST00000311371 PSPHP1O15172 72 aa11.17□□□□□ -0.62
SOX30-202ENST00000311371 INSP01308 110 aa11.15□□□□□ -0.62
SOX30-202ENST00000311371 PTPN13Q12923 2485 aa11.15□□□□□ -0.62
SOX30-202ENST00000311371 MUC7Q8TAX7 377 aa11.15□□□□□ -0.62
SOX30-202ENST00000311371 FASNP49327 2511 aaKnown RBP11.15□□□□□ -0.62
SOX30-202ENST00000311371 Q6ZQY7 126 aa11.15□□□□□ -0.63
SOX30-202ENST00000311371 C11orf44Q8N8P7 122 aa11.15□□□□□ -0.63
SOX30-202ENST00000311371 ANKRD17O75179 2603 aaKnown RBP11.14□□□□□ -0.63
SOX30-202ENST00000311371 KHDC1LQ5JSQ8 128 aa11.14□□□□□ -0.63
SOX30-202ENST00000311371 NBPF19A0A087WUL8 3843 aa11.14□□□□□ -0.63
SOX30-202ENST00000311371 APCP25054 2843 aa11.14□□□□□ -0.63
SOX30-202ENST00000311371 ERC2-IT1O76042 136 aa11.13□□□□□ -0.63
SOX30-202ENST00000311371 Q6ZRP5 223 aa11.13□□□□□ -0.63
SOX30-202ENST00000311371 CD164L2Q6UWJ8 174 aa11.13□□□□□ -0.63
SOX30-202ENST00000311371 ABCA2Q9BZC7 2435 aa11.11□□□□□ -0.63
SOX30-202ENST00000311371 Q8NDZ9 215 aa11.11□□□□□ -0.63
SOX30-202ENST00000311371 C9orf116Q5BN46 136 aaPredicted RBP11.11□□□□□ -0.63
SOX30-202ENST00000311371 LINC01006Q8NI28 216 aa11.11□□□□□ -0.63
SOX30-202ENST00000311371 CD164Q04900 197 aa11.1□□□□□ -0.63
SOX30-202ENST00000311371 hDV103S1A0JD37 113 aa11.1□□□□□ -0.63
SOX30-202ENST00000311371 PDE6GP18545 87 aa11.1□□□□□ -0.63
SOX30-202ENST00000311371 C9orf66Q5T8R8 295 aa11.1□□□□□ -0.63
SOX30-202ENST00000311371 CLPSL2Q6UWE3 100 aa11.1□□□□□ -0.63
SOX30-202ENST00000311371 C1orf158Q8N1D5 194 aa11.1□□□□□ -0.63
SOX30-202ENST00000311371 OCR1Q9BZK8 76 aa11.1□□□□□ -0.63
SOX30-202ENST00000311371 LINC00959A0A1B0GUT2 108 aa11.08□□□□□ -0.64
SOX30-202ENST00000311371 DEFB136Q30KP8 78 aa11.08□□□□□ -0.64
SOX30-202ENST00000311371 CCL19Q99731 98 aa11.08□□□□□ -0.64
SOX30-202ENST00000311371 KRTAP10-9P60411 292 aa11.08□□□□□ -0.64
SOX30-202ENST00000311371 MAP6D1Q9H9H5 199 aa11.08□□□□□ -0.64
SOX30-202ENST00000311371 NOP10Q9NPE3 64 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms